RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 SLC16A14Q7RTX9 510 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 SH2D6Q7Z4S9 175 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 ADCK1Q86TW2 530 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 MDP1Q86V88 176 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 ZDHHC21Q8IVQ6 265 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 SKA3Q8IX90 412 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 AQP12AQ8IXF9 295 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 ABHD12Q8N2K0 398 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 MUC15Q8N387 334 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 POM121L12Q8N7R1 296 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 ARIH2OSQ8N7S6 290 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 SYT14Q8NB59 555 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 NOXO1Q8NFA2 376 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 OR52L1Q8NGH7 329 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 OR13C2Q8NGS9 318 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 GNPDA2Q8TDQ7 276 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 NPRL2Q8WTW4 380 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 NSMAFQ92636 917 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 MCHR2Q969V1 340 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 CCDC124Q96CT7 223 aaKnown RBP3.17□□□□□ -1.9
NUP88-202ENST00000570937 CHID1Q9BWS9 393 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 FN3KQ9H479 309 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 CA10Q9NS85 328 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 CBLN4Q9NTU7 201 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 TMEM38BQ9NVV0 291 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 EIF3KQ9UBQ5 218 aaKnown RBP3.17□□□□□ -1.9
NUP88-202ENST00000570937 ZNF346Q9UL40 294 aaKnown RBP3.17□□□□□ -1.9
NUP88-202ENST00000570937 MOKQ9UQ07 419 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 BAIAP2Q9UQB8 552 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 SAMHD1Q9Y3Z3 626 aaKnown RBP3.17□□□□□ -1.9
NUP88-202ENST00000570937 TIMM10BQ9Y5J6 103 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 IER3IP1Q9Y5U9 82 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 FKBP7Q9Y680 259 aa3.17□□□□□ -1.9
NUP88-202ENST00000570937 IGHV1-18A0A0C4DH31 117 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 DHRS12A0PJE2 317 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 ARRDC5A6NEK1 342 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 A8MXK9 166 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 E7EQL1 145 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 ATP6V1G2-DDX39BF2Z307 99 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 H7C417 338 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 CDC42EP2O14613 210 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 ARPC3O15145 178 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 BCL2L11O43521 198 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 E2F6O75461 281 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 CIB2O75838 187 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 DIRAS1O95057 198 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 SNAP29O95721 258 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 CST1P01037 141 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 IFNGP01579 166 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 HLA-HP01893 362 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 HMGN1P05114 100 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 CST2P09228 141 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 CSF3P09919 207 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 OR4A8P0C604 315 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 CECR9P0C854 216 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 ATP6V1B2P21281 511 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 MSR1P21757 451 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 PAICSP22234 425 aaKnown RBP3.16□□□□□ -1.9
NUP88-202ENST00000570937 TUBG1P23258 451 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 STOMP27105 288 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 APLNRP35414 380 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 MAGEA2P43356 314 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 OMPP47874 163 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 EVX1P49640 407 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 GDI2P50395 445 aaKnown RBP3.16□□□□□ -1.9
NUP88-202ENST00000570937 ZNF133P52736 654 aaPredicted RBP3.16□□□□□ -1.9
NUP88-202ENST00000570937 BLVRAP53004 296 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 ERVK-25P63136 954 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 NAAAQ02083 359 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 HSF2Q03933 536 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 GLO1Q04760 184 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 SCRN3Q0VDG4 424 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 TSPAN31Q12999 210 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 ECH1Q13011 328 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 FAM189A2Q15884 450 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 SGCAQ16586 387 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 MICAQ29983 383 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 PGGHGQ32M88 737 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 SLC36A3Q495N2 470 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 PHYHD1Q5SRE7 291 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 OR2T5Q6IEZ7 315 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 C1orf94Q6P1W5 598 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 CCDC121Q6ZUS5 278 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 SPATA24Q86W54 205 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 TGIF2LYQ8IUE0 185 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 LRRC18Q8N456 261 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 LINC00612Q8N6U2 182 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 FAM86B1Q8N7N1 296 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 ZNF540Q8NDQ6 660 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 SLC30A7Q8NEW0 376 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 OR2T29Q8NH02 315 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 FANK1Q8TC84 345 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 CHPT1Q8WUD6 406 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 C11orf40Q8WZ69 217 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 NRBF2Q96F24 287 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 ERMAPQ96PL5 475 aaPredicted RBP3.16□□□□□ -1.9
NUP88-202ENST00000570937 TSPAN32Q96QS1 320 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 GPX7Q96SL4 187 aaPredicted RBP3.16□□□□□ -1.9
NUP88-202ENST00000570937 SH3GL3Q99963 347 aa3.16□□□□□ -1.9
NUP88-202ENST00000570937 BCL2L14Q9BZR8 327 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms