RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 CLEC18BQ6UXF7 455 aa7.65□□□□□ -1.19
LINC00558-201ENST00000569422 WDR5BQ86VZ2 330 aa7.65□□□□□ -1.19
LINC00558-201ENST00000569422 OR6K3Q8NGY3 331 aa7.65□□□□□ -1.19
LINC00558-201ENST00000569422 OR10D3Q8NH80 312 aa7.65□□□□□ -1.19
LINC00558-201ENST00000569422 FGFBP3Q8TAT2 258 aa7.65□□□□□ -1.19
LINC00558-201ENST00000569422 TOMM40LQ969M1 308 aa7.65□□□□□ -1.19
LINC00558-201ENST00000569422 REEP6Q96HR9 211 aa7.65□□□□□ -1.19
LINC00558-201ENST00000569422 HES7Q9BYE0 225 aa7.65□□□□□ -1.19
LINC00558-201ENST00000569422 REG4Q9BYZ8 158 aa7.65□□□□□ -1.19
LINC00558-201ENST00000569422 ARRDC1-AS1Q9H2J1 176 aa7.65□□□□□ -1.19
LINC00558-201ENST00000569422 DEPPQ9NTK1 212 aa7.65□□□□□ -1.19
LINC00558-201ENST00000569422 MYO7BQ6PIF6 2116 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 TMEM265A0A087WTH1 108 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 hCG_1809904A0A1W2PP81 198 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 A0A1W2PPE2 198 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 A0A1W2PR64 198 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 RNF222A6NCQ9 220 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 VAMP5O95183 116 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 TUBG1P23258 451 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 RPS27AP62979 156 aaKnown RBP7.64□□□□□ -1.19
LINC00558-201ENST00000569422 RSU1Q15404 277 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 ACER2Q5QJU3 275 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 SLC23A3Q6PIS1 610 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 PPP1R32Q7Z5V6 425 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 SULF2Q8IWU5 870 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 ZDHHC22Q8N966 263 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 SEMA6DQ8NFY4 1073 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 OR5M9Q8NGP3 310 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 OR13G1Q8NGZ3 307 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 THOC3Q96J01 351 aaKnown RBP7.64□□□□□ -1.19
LINC00558-201ENST00000569422 PECRQ9BY49 303 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 ZC4H2Q9NQZ6 224 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 TUBG2Q9NRH3 451 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 PLA2G3Q9NZ20 509 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 TNFSF18Q9UNG2 199 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 ADAMTS20P59510 1910 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 FAM166BA8MTA8 275 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 MFNGO00587 321 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 SCGNO76038 276 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 ONECUT2O95948 504 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 FABP1P07148 127 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 GSTP1P09211 210 aaKnown RBP7.64□□□□□ -1.19
LINC00558-201ENST00000569422 NR2C1P13056 603 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 FXYD4P59646 89 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 DEFA5Q01523 94 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 CDCP2Q5VXM1 449 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 LINC00696Q6ZRV3 163 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 SLC16A14Q7RTX9 510 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 TMEM17Q86X19 198 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 HOGA1Q86XE5 327 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 PXT1Q8NFP0 134 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 CT55Q8WUE5 264 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 PIGCQ92535 297 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 TMEM54Q969K7 222 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 OPN3Q9H1Y3 402 aaPredicted RBP7.64□□□□□ -1.19
LINC00558-201ENST00000569422 PPA2Q9H2U2 334 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 P4HTMQ9NXG6 502 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 SLC2A8Q9NY64 477 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 MCTS1Q9ULC4 181 aaKnown RBP7.64□□□□□ -1.19
LINC00558-201ENST00000569422 FLVCR1Q9Y5Y0 555 aa7.64□□□□□ -1.19
LINC00558-201ENST00000569422 COL5A1P20908 1838 aaPredicted RBP7.64□□□□□ -1.19
LINC00558-201ENST00000569422 A0A0D9SG52 128 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 DUS4LO95620 317 aaKnown RBP7.63□□□□□ -1.19
LINC00558-201ENST00000569422 CELA3AP09093 270 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 PSMB6P28072 239 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 CLDN15P56746 228 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 IL24Q13007 206 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 KCNMB1Q16558 191 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 ANKRD55Q3KP44 614 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 TMEM128Q5BJH2 165 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 OR2W3Q7Z3T1 314 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 PPP1R35Q8TAP8 253 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 TMEM230Q96A57 120 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 ZNF2Q9BSG1 426 aaPredicted RBP7.63□□□□□ -1.19
LINC00558-201ENST00000569422 DHRS7CA6NNS2 312 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 CD8AP01732 235 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 FKBP2P26885 142 aaKnown RBP7.63□□□□□ -1.19
LINC00558-201ENST00000569422 CYB561P49447 251 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 C10orf128Q5T292 105 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 CRIP3Q6Q6R5 217 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 ACOT7LQ6ZUV0 252 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 DMRTC2Q8IXT2 367 aaPredicted RBP7.63□□□□□ -1.19
LINC00558-201ENST00000569422 TMEM185AQ8NFB2 350 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 WBP1Q96G27 269 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 TAAR9Q96RI9 348 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 NEU1Q99519 415 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 CHST5Q9GZS9 411 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 ASF1BQ9NVP2 202 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 LRFN1Q9P244 771 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 ZNF107Q9UII5 783 aaPredicted RBP7.63□□□□□ -1.19
LINC00558-201ENST00000569422 PCDHB10Q9UN67 800 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 GPR132Q9UNW8 380 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 TEX13DA0A0J9YY54 714 aaPredicted RBP7.63□□□□□ -1.19
LINC00558-201ENST00000569422 ZNF850A8MQ14 1090 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 CCL1P22362 96 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 THBS4P35443 961 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 PIGYQ3MUY2 71 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 SP6Q3SY56 376 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 CYB5R2Q6BCY4 276 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 DRAM2Q6UX65 266 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms