RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 MRPS28Q9Y2Q9 187 aaKnown RBP13.19□□□□□ -0.3
SPG7-218ENST00000568205 PPIAL4AQ9Y536 164 aa13.19□□□□□ -0.3
SPG7-218ENST00000568205 MYO9AB2RTY4 2548 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 OOEPA6NGQ2 149 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 C3orf80F5H4A9 247 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 TRAPPC2LH3BP13 241 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 KDM4BO94953 1096 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 NXPH2O95156 264 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 FSTL3O95633 263 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 SLC25A16P16260 332 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 RAB3BP20337 219 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 BCL3P20749 454 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 GLRA1P23415 457 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 SDC2P34741 201 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 TGFBR1P36897 503 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 MDH2P40926 338 aaKnown RBP13.18□□□□□ -0.3
SPG7-218ENST00000568205 NR4A2P43354 598 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 OR10A3P58181 314 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 NCS1P62166 190 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 BLMHQ13867 455 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 CTF1Q16619 201 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 C1orf100Q5SVJ3 147 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 ASCL4Q6XD76 172 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 C1QL2Q7Z5L3 287 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 Q8IYB0 196 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 BATF2Q8N1L9 274 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 C19orf18Q8NEA5 215 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 WFDC11Q8NEX6 87 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 OR4D6Q8NGJ1 314 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 OR6M1Q8NGM8 313 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 RASL12Q9NYN1 266 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 V9GY05 133 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 CREBBPQ92793 2442 aa13.18□□□□□ -0.3
SPG7-218ENST00000568205 ISPDA4D126 451 aa13.17□□□□□ -0.3
SPG7-218ENST00000568205 F8VVB4 439 aa13.17□□□□□ -0.3
SPG7-218ENST00000568205 F8VWA3 439 aa13.17□□□□□ -0.3
SPG7-218ENST00000568205 SLC17A2O00624 439 aa13.17□□□□□ -0.3
SPG7-218ENST00000568205 CDRT1O95170 752 aa13.17□□□□□ -0.3
SPG7-218ENST00000568205 CLEC2LP0C7M8 214 aa13.17□□□□□ -0.3
SPG7-218ENST00000568205 HTR2CP28335 458 aa13.17□□□□□ -0.3
SPG7-218ENST00000568205 NPBWR2P48146 333 aa13.17□□□□□ -0.3
SPG7-218ENST00000568205 VBP1P61758 197 aa13.17□□□□□ -0.3
SPG7-218ENST00000568205 SMIM21Q3B7S5 101 aa13.17□□□□□ -0.3
SPG7-218ENST00000568205 TEX36Q5VZQ5 186 aa13.17□□□□□ -0.3
SPG7-218ENST00000568205 AWAT2Q6E213 333 aa13.17□□□□□ -0.3
SPG7-218ENST00000568205 SFRP4Q6FHJ7 346 aaPredicted RBP13.17□□□□□ -0.3
SPG7-218ENST00000568205 GLIPR1L1Q6UWM5 242 aa13.17□□□□□ -0.3
SPG7-218ENST00000568205 LRRC28Q86X40 367 aaPredicted RBP13.17□□□□□ -0.3
SPG7-218ENST00000568205 DEFB108BQ8NET1 73 aa13.17□□□□□ -0.3
SPG7-218ENST00000568205 SEH1LQ96EE3 360 aa13.17□□□□□ -0.3
SPG7-218ENST00000568205 Q96MF0 132 aa13.17□□□□□ -0.3
SPG7-218ENST00000568205 S100A13Q99584 98 aa13.17□□□□□ -0.3
SPG7-218ENST00000568205 ELL3Q9HB65 397 aaPredicted RBP13.17□□□□□ -0.3
SPG7-218ENST00000568205 PLGRKTQ9HBL7 147 aa13.17□□□□□ -0.3
SPG7-218ENST00000568205 TMEM165Q9HC07 324 aa13.17□□□□□ -0.3
SPG7-218ENST00000568205 HES4Q9HCC6 221 aa13.17□□□□□ -0.3
SPG7-218ENST00000568205 RBFOX1Q9NWB1 397 aaKnown RBP13.17□□□□□ -0.3
SPG7-218ENST00000568205 DNAJB11Q9UBS4 358 aa13.17□□□□□ -0.3
SPG7-218ENST00000568205 ING4Q9UNL4 249 aa13.17□□□□□ -0.3
SPG7-218ENST00000568205 TEX15Q9BXT5 2789 aa13.16□□□□□ -0.3
SPG7-218ENST00000568205 PRRC2AP48634 2157 aaKnown RBP13.16□□□□□ -0.3
SPG7-218ENST00000568205 IGHV3OR15-7A0A075B7D8 119 aa13.16□□□□□ -0.3
SPG7-218ENST00000568205 TRAV38-1A0A0B4J264 116 aa13.16□□□□□ -0.3
SPG7-218ENST00000568205 A0A0G2JK05 382 aa13.16□□□□□ -0.3
SPG7-218ENST00000568205 SMIM30A4D0T7 59 aa13.16□□□□□ -0.3
SPG7-218ENST00000568205 SLC22A1O15245 554 aa13.16□□□□□ -0.3
SPG7-218ENST00000568205 SFTPBP07988 381 aa13.16□□□□□ -0.3
SPG7-218ENST00000568205 MUC1P15941 1255 aaPredicted RBP13.16□□□□□ -0.3
SPG7-218ENST00000568205 TMBIM6P55061 237 aa13.16□□□□□ -0.3
SPG7-218ENST00000568205 MXD1Q05195 221 aa13.16□□□□□ -0.3
SPG7-218ENST00000568205 RSU1Q15404 277 aa13.16□□□□□ -0.3
SPG7-218ENST00000568205 RAB11BQ15907 218 aa13.16□□□□□ -0.3
SPG7-218ENST00000568205 MICBQ29980 383 aa13.16□□□□□ -0.3
SPG7-218ENST00000568205 ZNF404Q494X3 552 aa13.16□□□□□ -0.3
SPG7-218ENST00000568205 TMEM155Q4W5P6 130 aa13.16□□□□□ -0.3
SPG7-218ENST00000568205 FAM166AQ6J272 317 aa13.16□□□□□ -0.3
SPG7-218ENST00000568205 ACP7Q6ZNF0 438 aa13.16□□□□□ -0.3
SPG7-218ENST00000568205 NR2C2APQ86WQ0 139 aa13.16□□□□□ -0.3
SPG7-218ENST00000568205 FAM90A1Q86YD7 464 aa13.16□□□□□ -0.3
SPG7-218ENST00000568205 MUC20Q8N307 709 aaPredicted RBP13.16□□□□□ -0.3
SPG7-218ENST00000568205 OR10K1Q8NGX5 313 aa13.16□□□□□ -0.3
SPG7-218ENST00000568205 TBC1D15Q8TC07 691 aa13.16□□□□□ -0.3
SPG7-218ENST00000568205 RAB2BQ8WUD1 216 aa13.16□□□□□ -0.3
SPG7-218ENST00000568205 EMG1Q92979 244 aaKnown RBP13.16□□□□□ -0.3
SPG7-218ENST00000568205 C12orf43Q96C57 262 aaKnown RBP13.16□□□□□ -0.3
SPG7-218ENST00000568205 C1orf147Q96MC9 270 aaPredicted RBP13.16□□□□□ -0.3
SPG7-218ENST00000568205 BCL7BQ9BQE9 202 aa13.16□□□□□ -0.3
SPG7-218ENST00000568205 METTL9Q9H1A3 318 aa13.16□□□□□ -0.3
SPG7-218ENST00000568205 RHOFQ9HBH0 211 aa13.16□□□□□ -0.3
SPG7-218ENST00000568205 IL36GQ9NZH8 169 aa13.16□□□□□ -0.3
SPG7-218ENST00000568205 NLKQ9UBE8 527 aa13.16□□□□□ -0.3
SPG7-218ENST00000568205 TANC2Q9HCD6 1990 aa13.15□□□□□ -0.3
SPG7-218ENST00000568205 IFITM5A6NNB3 132 aa13.15□□□□□ -0.3
SPG7-218ENST00000568205 NOTOA8MTQ0 251 aa13.15□□□□□ -0.3
SPG7-218ENST00000568205 ZNF780AO75290 641 aaPredicted RBP13.15□□□□□ -0.3
SPG7-218ENST00000568205 UBBP0CG47 229 aa13.15□□□□□ -0.3
SPG7-218ENST00000568205 CFPP27918 469 aa13.15□□□□□ -0.3
SPG7-218ENST00000568205 SERPINB10P48595 397 aa13.15□□□□□ -0.3
SPG7-218ENST00000568205 P2RY14Q15391 338 aa13.15□□□□□ -0.3
SPG7-218ENST00000568205 KCNJ8Q15842 424 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms