RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 ZNF738Q8NE65 137 aa0.3□□□□□ -2.36
CDH1-211ENST00000567320 ZNF555Q8NEP9 628 aa0.3□□□□□ -2.36
CDH1-211ENST00000567320 C10orf105Q8TEF2 133 aa0.3□□□□□ -2.36
CDH1-211ENST00000567320 DNAJC30Q96LL9 226 aa0.3□□□□□ -2.36
CDH1-211ENST00000567320 UBE2E2Q96LR5 201 aa0.3□□□□□ -2.36
CDH1-211ENST00000567320 OR2A7Q96R45 310 aa0.3□□□□□ -2.36
CDH1-211ENST00000567320 OR52B2Q96RD2 323 aa0.3□□□□□ -2.36
CDH1-211ENST00000567320 B9D2Q9BPU9 175 aa0.3□□□□□ -2.36
CDH1-211ENST00000567320 SRRQ9GZT4 340 aa0.3□□□□□ -2.36
CDH1-211ENST00000567320 PXMP2Q9NR77 195 aa0.3□□□□□ -2.36
CDH1-211ENST00000567320 FADS3Q9Y5Q0 445 aa0.3□□□□□ -2.36
CDH1-211ENST00000567320 ZNF706Q9Y5V0 76 aaPredicted RBP0.3□□□□□ -2.36
CDH1-211ENST00000567320 MDN1Q9NU22 5596 aa0.29□□□□□ -2.36
CDH1-211ENST00000567320 IGHV3-43A0A0B4J1X8 118 aa0.29□□□□□ -2.36
CDH1-211ENST00000567320 A0A1W2PQL4 384 aaPredicted RBP0.29□□□□□ -2.36
CDH1-211ENST00000567320 GMNCA6NCL1 334 aa0.29□□□□□ -2.36
CDH1-211ENST00000567320 KLRC4-KLRK1H3BQV0 150 aa0.29□□□□□ -2.36
CDH1-211ENST00000567320 TP53I11O14683 189 aa0.29□□□□□ -2.36
CDH1-211ENST00000567320 ZBTB5O15062 677 aa0.29□□□□□ -2.36
CDH1-211ENST00000567320 NDUFS5O43920 106 aa0.29□□□□□ -2.36
CDH1-211ENST00000567320 KRT16P08779 473 aa0.29□□□□□ -2.36
CDH1-211ENST00000567320 SNRPAP09012 282 aaKnown RBP0.29□□□□□ -2.36
CDH1-211ENST00000567320 PSMB9P28065 219 aa0.29□□□□□ -2.36
CDH1-211ENST00000567320 PSMB2P49721 201 aa0.29□□□□□ -2.36
CDH1-211ENST00000567320 LAMTOR4Q0VGL1 99 aa0.29□□□□□ -2.36
CDH1-211ENST00000567320 TNXAQ16473 311 aa0.29□□□□□ -2.36
CDH1-211ENST00000567320 LINC00303Q3SY05 128 aa0.29□□□□□ -2.36
CDH1-211ENST00000567320 FAM231DQ6ZW35 169 aa0.29□□□□□ -2.36
CDH1-211ENST00000567320 JAGN1Q8N5M9 183 aa0.29□□□□□ -2.36
CDH1-211ENST00000567320 OR52E5Q8NH55 327 aa0.29□□□□□ -2.36
CDH1-211ENST00000567320 ING5Q8WYH8 240 aa0.29□□□□□ -2.36
CDH1-211ENST00000567320 SMARCD1Q96GM5 515 aa0.29□□□□□ -2.36
CDH1-211ENST00000567320 ARV1Q9H2C2 271 aa0.29□□□□□ -2.36
CDH1-211ENST00000567320 REEP1Q9H902 201 aa0.29□□□□□ -2.36
CDH1-211ENST00000567320 MCUBQ9NWR8 336 aa0.29□□□□□ -2.36
CDH1-211ENST00000567320 TAC3Q9UHF0 121 aa0.29□□□□□ -2.36
CDH1-211ENST00000567320 VAX2Q9UIW0 290 aa0.29□□□□□ -2.36
CDH1-211ENST00000567320 ASB3Q9Y575 518 aa0.29□□□□□ -2.36
CDH1-211ENST00000567320 MPDZO75970 2070 aa0.29□□□□□ -2.36
CDH1-211ENST00000567320 SDK1Q7Z5N4 2213 aa0.29□□□□□ -2.36
CDH1-211ENST00000567320 SHANK3Q9BYB0 1731 aa0.28□□□□□ -2.36
CDH1-211ENST00000567320 ODF3BA8MYP8 253 aa0.28□□□□□ -2.36
CDH1-211ENST00000567320 TEX46H3BTG2 121 aa0.28□□□□□ -2.36
CDH1-211ENST00000567320 K7EPK0 472 aa0.28□□□□□ -2.36
CDH1-211ENST00000567320 BCKDKO14874 412 aa0.28□□□□□ -2.36
CDH1-211ENST00000567320 UPK1BO75841 260 aa0.28□□□□□ -2.36
CDH1-211ENST00000567320 ETHE1O95571 254 aa0.28□□□□□ -2.36
CDH1-211ENST00000567320 PTTG1O95997 202 aa0.28□□□□□ -2.36
CDH1-211ENST00000567320 OPN1SWP03999 348 aa0.28□□□□□ -2.36
CDH1-211ENST00000567320 IFNW1P05000 195 aa0.28□□□□□ -2.36
CDH1-211ENST00000567320 HOXB8P17481 243 aaPredicted RBP0.28□□□□□ -2.36
CDH1-211ENST00000567320 PAX6P26367 422 aa0.28□□□□□ -2.36
CDH1-211ENST00000567320 MTPNP58546 118 aa0.28□□□□□ -2.36
CDH1-211ENST00000567320 FBXL19-AS1Q494R0 122 aa0.28□□□□□ -2.36
CDH1-211ENST00000567320 ZNF773Q6PK81 442 aa0.28□□□□□ -2.36
CDH1-211ENST00000567320 SCXQ7RTU7 201 aa0.28□□□□□ -2.36
CDH1-211ENST00000567320 MUC15Q8N387 334 aa0.28□□□□□ -2.36
CDH1-211ENST00000567320 TCAIMQ8N3R3 496 aa0.28□□□□□ -2.36
CDH1-211ENST00000567320 LINC00337Q8N6G1 96 aa0.28□□□□□ -2.36
CDH1-211ENST00000567320 NRGNQ92686 78 aa0.28□□□□□ -2.36
CDH1-211ENST00000567320 RCN3Q96D15 328 aa0.28□□□□□ -2.36
CDH1-211ENST00000567320 NAA38Q9BRA0 125 aaKnown RBP0.28□□□□□ -2.36
CDH1-211ENST00000567320 ZNF251Q9BRH9 671 aa0.28□□□□□ -2.36
CDH1-211ENST00000567320 PKIBQ9C010 78 aa0.28□□□□□ -2.36
CDH1-211ENST00000567320 CCNB1IP1Q9NPC3 277 aa0.28□□□□□ -2.36
CDH1-211ENST00000567320 LYARQ9NX58 379 aaKnown RBP0.28□□□□□ -2.36
CDH1-211ENST00000567320 TAS2R9Q9NYW1 312 aa0.28□□□□□ -2.36
CDH1-211ENST00000567320 KLF13Q9Y2Y9 288 aaPredicted RBP0.28□□□□□ -2.36
CDH1-211ENST00000567320 JCADQ9P266 1359 aa0.28□□□□□ -2.36
CDH1-211ENST00000567320 NPHP4O75161 1426 aaPredicted RBP0.28□□□□□ -2.37
CDH1-211ENST00000567320 PXDNLA1KZ92 1463 aa0.28□□□□□ -2.37
CDH1-211ENST00000567320 COL4A2P08572 1712 aa0.27□□□□□ -2.37
CDH1-211ENST00000567320 A0A0J9YYE9 177 aa0.27□□□□□ -2.37
CDH1-211ENST00000567320 PHGR1C9JFL3 82 aa0.27□□□□□ -2.37
CDH1-211ENST00000567320 J3QT63 122 aa0.27□□□□□ -2.37
CDH1-211ENST00000567320 TRBC1P01850 177 aa0.27□□□□□ -2.37
CDH1-211ENST00000567320 HLA-HP01893 362 aa0.27□□□□□ -2.37
CDH1-211ENST00000567320 CATP04040 527 aaKnown RBP0.27□□□□□ -2.37
CDH1-211ENST00000567320 GTF2F2P13984 249 aa0.27□□□□□ -2.37
CDH1-211ENST00000567320 STOMP27105 288 aa0.27□□□□□ -2.37
CDH1-211ENST00000567320 MLIPQ5VWP3 458 aa0.27□□□□□ -2.37
CDH1-211ENST00000567320 NIPAL1Q6NVV3 410 aa0.27□□□□□ -2.37
CDH1-211ENST00000567320 NDUFAF7Q7L592 441 aa0.27□□□□□ -2.37
CDH1-211ENST00000567320 TBC1D21Q8IYX1 336 aa0.27□□□□□ -2.37
CDH1-211ENST00000567320 SLC7A5P1Q8MH63 180 aa0.27□□□□□ -2.37
CDH1-211ENST00000567320 C8orf44Q96CB5 159 aa0.27□□□□□ -2.37
CDH1-211ENST00000567320 DDIT4LQ96D03 193 aa0.27□□□□□ -2.37
CDH1-211ENST00000567320 PANX1Q96RD7 426 aa0.27□□□□□ -2.37
CDH1-211ENST00000567320 PORCNQ9H237 461 aa0.27□□□□□ -2.37
CDH1-211ENST00000567320 RBM22Q9NW64 420 aaKnown RBP eCLIP0.27□□□□□ -2.37
CDH1-211ENST00000567320 OR51B2Q9Y5P1 312 aa0.27□□□□□ -2.37
CDH1-211ENST00000567320 NINLQ9Y2I6 1382 aa0.27□□□□□ -2.37
CDH1-211ENST00000567320 CRB1P82279 1406 aa0.27□□□□□ -2.37
CDH1-211ENST00000567320 PLXNB3Q9ULL4 1909 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 TRGV2A0A075B6R0 118 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 TRAV8-4A0A0B4J246 113 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 A0A0B4J2E0 115 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 A0A0G2JQZ4 141 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 KBTBD11-OT1A0A1B0GTJ5 212 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 MPDU1O75352 247 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms