RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 C4orf26Q17RF5 130 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 GSG1Q2KHT4 349 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 ZNF630Q2M218 657 aaPredicted RBP2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 HLA-DRB5Q30154 266 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 TIMM50Q3ZCQ8 353 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 CDNFQ49AH0 187 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 SPIN4Q56A73 249 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 TTC32Q5I0X7 151 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 METTL21CQ5VZV1 264 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 CST9Q5W186 159 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 DNM1P34Q6PK57 102 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 ZNF493Q6ZR52 646 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 CCDC121Q6ZUS5 278 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 SLC13A5Q86YT5 568 aaPredicted RBP2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 KLHDC8BQ8IXV7 354 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 FAM71E2Q8N5Q1 922 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 CCNYL1Q8N7R7 359 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 COX18Q8N8Q8 333 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 UBAC2Q8NBM4 344 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 OR5B17Q8NGF7 314 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 RERGQ96A58 199 aaPredicted RBP2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 HAUS1Q96CS2 278 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 CEP19Q96LK0 163 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 PGLYRP2Q96PD5 576 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 SMIM14Q96QK8 99 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 METTL26Q96S19 204 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 STACQ99469 402 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 SULT4A1Q9BR01 284 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 FAAP24Q9BTP7 215 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 TMED9Q9BVK6 235 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 BCL2L14Q9BZR8 327 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 UBXN6Q9BZV1 441 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 LHX5Q9H2C1 402 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 SPNS1Q9H2V7 528 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 MAP1LC3AQ9H492 121 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 MED4Q9NPJ6 270 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 C12orf4Q9NQ89 552 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 MARCH5Q9NX47 278 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 SLC7A11Q9UPY5 501 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 SLC22A13Q9Y226 551 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 FARSAQ9Y285 508 aaKnown RBP2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 SNX10Q9Y5X0 201 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 ABCA6Q8N139 1617 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 USP32Q8NFA0 1604 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 CACNA1GO43497 2377 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 IQGAP2Q13576 1575 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 SAMD9LQ8IVG5 1584 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 ZNF518AQ6AHZ1 1483 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 EVC2Q86UK5 1308 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 GOLGB1Q14789 3259 aaKnown RBP2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 TMEM131LA2VDJ0 1609 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 CEACAM18A8MTB9 384 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 PGRMC1O00264 195 aaKnown RBP2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 TCAPO15273 167 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 NTN1O95631 604 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 SEMG1P04279 462 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 CDK1P06493 297 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 FABP1P07148 127 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 MMP7P09237 267 aaPredicted RBP2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 IGHV3-43DP0DP04 118 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 SLC2A1P11166 492 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 ZNF30P17039 623 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 ADORA1P30542 326 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 CD70P32970 193 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 TALDO1P37837 337 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 CDKN2BP42772 138 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 RPL34P49207 117 aaKnown RBP2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 TTPAP49638 278 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 RAB25P57735 213 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 POLR2GP62487 172 aaKnown RBP eCLIP2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 PRR3P79522 188 aaKnown RBP2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 SLC7A9P82251 487 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 PRDX1Q06830 199 aaKnown RBP2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 INCA1Q0VD86 236 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 TSPAN31Q12999 210 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 PPP1R1AQ13522 171 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 PDK2Q15119 407 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 PMVKQ15126 192 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 SPA17Q15506 151 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 SLC25A35Q3KQZ1 300 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 KRTAP27-1Q3LI81 207 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 PRR30Q53SZ7 412 aaPredicted RBP2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 COA6Q5JTJ3 125 aaKnown RBP2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 HHATQ5VTY9 493 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 FBXW9Q5XUX1 488 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 UGT2A3Q6UWM9 527 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 PAMR1Q6UXH9 720 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 STRADAQ7RTN6 431 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 TMEM179BQ7Z7N9 219 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 LGI3Q8N145 548 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 GPD1LQ8N335 351 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 Q8N377 158 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 C11orf72Q8NBR9 251 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 DTD1Q8TEA8 209 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 GTSF1Q8WW33 167 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 UCN3Q969E3 161 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 NTAN1Q96AB6 310 aa2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 DCPSQ96C86 337 aaKnown RBP2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 AURKBQ96GD4 344 aaPredicted RBP2.51□□□□□ -2.01
HERPUD1-211ENST00000566550 SPACA5Q96QH8 159 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms