RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 CRLF1O75462 422 aa17.54■□□□□ 0.4
SHCBP1-205ENST00000566016 RAB3AP20336 220 aa17.54■□□□□ 0.4
SHCBP1-205ENST00000566016 EEF1B2P24534 225 aaKnown RBP17.54■□□□□ 0.4
SHCBP1-205ENST00000566016 CR1LQ2VPA4 569 aa17.54■□□□□ 0.4
SHCBP1-205ENST00000566016 ACP7Q6ZNF0 438 aa17.54■□□□□ 0.4
SHCBP1-205ENST00000566016 ANGPTL6Q8NI99 470 aa17.54■□□□□ 0.4
SHCBP1-205ENST00000566016 CCDC90BQ9GZT6 254 aa17.54■□□□□ 0.4
SHCBP1-205ENST00000566016 PNMA8CA0A1B0GUJ8 204 aa17.53■□□□□ 0.4
SHCBP1-205ENST00000566016 PHF1O43189 567 aaPredicted RBP17.53■□□□□ 0.4
SHCBP1-205ENST00000566016 FSTP19883 344 aa17.53■□□□□ 0.4
SHCBP1-205ENST00000566016 HNF1AP20823 631 aa17.53■□□□□ 0.4
SHCBP1-205ENST00000566016 PAX2Q02962 417 aa17.53■□□□□ 0.4
SHCBP1-205ENST00000566016 SLC25A26Q70HW3 274 aa17.53■□□□□ 0.4
SHCBP1-205ENST00000566016 Q8IYB0 196 aa17.53■□□□□ 0.4
SHCBP1-205ENST00000566016 MS4A15Q8N5U1 240 aa17.53■□□□□ 0.4
SHCBP1-205ENST00000566016 OR13C5Q8NGS8 318 aa17.53■□□□□ 0.4
SHCBP1-205ENST00000566016 DACT3Q96B18 629 aaPredicted RBP17.53■□□□□ 0.4
SHCBP1-205ENST00000566016 CEP19Q96LK0 163 aa17.53■□□□□ 0.4
SHCBP1-205ENST00000566016 NKX6-3A6NJ46 265 aa17.52■□□□□ 0.4
SHCBP1-205ENST00000566016 GPX5O75715 221 aa17.52■□□□□ 0.4
SHCBP1-205ENST00000566016 NXPH2O95156 264 aa17.52■□□□□ 0.4
SHCBP1-205ENST00000566016 MAPK3P27361 379 aaPredicted RBP17.52■□□□□ 0.4
SHCBP1-205ENST00000566016 GMFBP60983 142 aa17.52■□□□□ 0.4
SHCBP1-205ENST00000566016 FAM120AOSQ5T036 256 aa17.52■□□□□ 0.4
SHCBP1-205ENST00000566016 DCAF12L2Q5VW00 463 aa17.52■□□□□ 0.4
SHCBP1-205ENST00000566016 ZNF788Q6ZQV5 615 aa17.52■□□□□ 0.4
SHCBP1-205ENST00000566016 MKXQ8IYA7 352 aa17.52■□□□□ 0.4
SHCBP1-205ENST00000566016 SHARPINQ9H0F6 387 aa17.52■□□□□ 0.4
SHCBP1-205ENST00000566016 SMURF1Q9HCE7 757 aa17.52■□□□□ 0.4
SHCBP1-205ENST00000566016 TAS2R4Q9NYW5 299 aa17.52■□□□□ 0.4
SHCBP1-205ENST00000566016 MTCH1Q9NZJ7 389 aa17.52■□□□□ 0.4
SHCBP1-205ENST00000566016 ZNF222Q9UK12 451 aa17.52■□□□□ 0.4
SHCBP1-205ENST00000566016 IGKV1D-17A0A075B6S4 117 aa17.51■□□□□ 0.39
SHCBP1-205ENST00000566016 TRBV5-7A0A0A0MS05 114 aa17.51■□□□□ 0.39
SHCBP1-205ENST00000566016 ZNF879B4DU55 563 aa17.51■□□□□ 0.39
SHCBP1-205ENST00000566016 GPR37O15354 613 aa17.51■□□□□ 0.39
SHCBP1-205ENST00000566016 CYB5AP00167 134 aa17.51■□□□□ 0.39
SHCBP1-205ENST00000566016 HCKP08631 526 aa17.51■□□□□ 0.39
SHCBP1-205ENST00000566016 PSG2P11465 335 aa17.51■□□□□ 0.39
SHCBP1-205ENST00000566016 AMY2BP19961 511 aa17.51■□□□□ 0.39
SHCBP1-205ENST00000566016 RIPPLY3P57055 190 aa17.51■□□□□ 0.39
SHCBP1-205ENST00000566016 PPP3R1P63098 170 aa17.51■□□□□ 0.39
SHCBP1-205ENST00000566016 MLLT11Q13015 90 aaPredicted RBP17.51■□□□□ 0.39
SHCBP1-205ENST00000566016 PDZK1IP1Q13113 114 aa17.51■□□□□ 0.39
SHCBP1-205ENST00000566016 KISS1Q15726 138 aa17.51■□□□□ 0.39
SHCBP1-205ENST00000566016 CRIP3Q6Q6R5 217 aa17.51■□□□□ 0.39
SHCBP1-205ENST00000566016 SAXO1Q8IYX7 474 aa17.51■□□□□ 0.39
SHCBP1-205ENST00000566016 UFD1Q92890 307 aa17.51■□□□□ 0.39
SHCBP1-205ENST00000566016 MED30Q96HR3 178 aa17.51■□□□□ 0.39
SHCBP1-205ENST00000566016 ZNF488Q96MN9 340 aa17.51■□□□□ 0.39
SHCBP1-205ENST00000566016 OR14A2Q96R54 314 aa17.51■□□□□ 0.39
SHCBP1-205ENST00000566016 CCL13Q99616 98 aa17.51■□□□□ 0.39
SHCBP1-205ENST00000566016 RHOFQ9HBH0 211 aa17.51■□□□□ 0.39
SHCBP1-205ENST00000566016 TMEM138Q9NPI0 162 aa17.51■□□□□ 0.39
SHCBP1-205ENST00000566016 SNTG1Q9NSN8 517 aa17.51■□□□□ 0.39
SHCBP1-205ENST00000566016 CKLFQ9UBR5 152 aa17.51■□□□□ 0.39
SHCBP1-205ENST00000566016 TRAPPC2LH3BP13 241 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 SIGLEC5O15389 551 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 MAGEB3O15480 346 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 ALDOBP05062 364 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 IGFBP3P17936 291 aaPredicted RBP17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 POU3F4P49335 361 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 IL13RA1P78552 427 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 TPBGQ13641 420 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 CHRFAM7AQ494W8 412 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 CD276Q5ZPR3 534 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 TEX29Q8N6K0 151 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 ZSCAN4Q8NAM6 433 aaPredicted RBP17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 OR5T2Q8NGG2 359 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 OR51A2Q8NGJ7 313 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 SDSLQ96GA7 329 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 DERL3Q96Q80 235 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 INSIG2Q9Y5U4 225 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 IGHV2-70DA0A0C4DH43 119 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 DVL1O14640 695 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 FCN3O75636 299 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 PLATP00750 562 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 KNG1P01042 644 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 ZNF367Q7RTV3 350 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 FAM216BQ8N7L0 139 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 SLAMF9Q96A28 289 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 GAFA1Q96PS6 74 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 SPACA5Q96QH8 159 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 BEX2Q9BXY8 128 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 TMPRSS13Q9BYE2 586 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 ACOT13Q9NPJ3 140 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 MMP26Q9NRE1 261 aa17.5■□□□□ 0.39
SHCBP1-205ENST00000566016 ECDO95905 644 aaPredicted RBP17.49■□□□□ 0.39
SHCBP1-205ENST00000566016 CPEP16870 476 aa17.49■□□□□ 0.39
SHCBP1-205ENST00000566016 ZP1P60852 638 aa17.49■□□□□ 0.39
SHCBP1-205ENST00000566016 LRRC10Q5BKY1 277 aa17.49■□□□□ 0.39
SHCBP1-205ENST00000566016 FAHD2BQ6P2I3 314 aaPredicted RBP17.49■□□□□ 0.39
SHCBP1-205ENST00000566016 SVOPQ8N4V2 548 aa17.49■□□□□ 0.39
SHCBP1-205ENST00000566016 RAB40AQ8WXH6 277 aa17.49■□□□□ 0.39
SHCBP1-205ENST00000566016 FAHD2AQ96GK7 314 aa17.49■□□□□ 0.39
SHCBP1-205ENST00000566016 DMRTB1Q96MA1 342 aa17.49■□□□□ 0.39
SHCBP1-205ENST00000566016 MGLLQ99685 303 aa17.49■□□□□ 0.39
SHCBP1-205ENST00000566016 SEBOXQ9HB31 216 aaPredicted RBP17.49■□□□□ 0.39
SHCBP1-205ENST00000566016 FOXJ3Q9UPW0 622 aa17.49■□□□□ 0.39
SHCBP1-205ENST00000566016 DSCAML1Q8TD84 2053 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms