RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 OR1S1Q8NH92 325 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 TRMT10AQ8TBZ6 339 aaKnown RBP2.94□□□□□ -1.94
CHD9-212ENST00000564641 RXFP4Q8TDU9 374 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 CA5BP1Q8WTZ4 195 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 TWIST2Q8WVJ9 160 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 APH1BQ8WW43 257 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 MAFIPQ8WZ33 124 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 OR8D1Q8WZ84 308 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 FGF11Q92914 225 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 SLC25A46Q96AG3 418 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 C14orf144Q96I85 54 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 C12orf66Q96MD2 445 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 KCTD7Q96MP8 289 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 VSTM2LQ96N03 204 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 CCDC115Q96NT0 180 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 SIGLEC12Q96PQ1 595 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 PITX2Q99697 317 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 MRPL45Q9BRJ2 306 aaKnown RBP2.94□□□□□ -1.94
CHD9-212ENST00000564641 ZNF670Q9BS34 389 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 CDCA4Q9BXL8 241 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 CHIAQ9BZP6 476 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 METTL9Q9H1A3 318 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 SLC38A1Q9H2H9 487 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 REEP1Q9H902 201 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 PLEKHA3Q9HB20 300 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 CRLF2Q9HC73 371 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 AMBNQ9NP70 447 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 DCAF13Q9NV06 445 aaKnown RBP2.94□□□□□ -1.94
CHD9-212ENST00000564641 AIG1Q9NVV5 245 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 GPATCH2LQ9NWQ4 482 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 C1orf109Q9NX04 203 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 MS4A12Q9NXJ0 267 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 VNN3Q9NY84 501 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 GHRLQ9UBU3 117 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 SAMD4AQ9UPU9 718 aaKnown RBP2.94□□□□□ -1.94
CHD9-212ENST00000564641 KCNIP3Q9Y2W7 256 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 RNF115Q9Y4L5 304 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 HELZ2Q9BYK8 2649 aaKnown RBP2.94□□□□□ -1.94
CHD9-212ENST00000564641 LAMA5O15230 3695 aa2.94□□□□□ -1.94
CHD9-212ENST00000564641 COL5A1P20908 1838 aaPredicted RBP2.93□□□□□ -1.94
CHD9-212ENST00000564641 NUMA1Q14980 2115 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 RP1L1Q8IWN7 2480 aaPredicted RBP2.93□□□□□ -1.94
CHD9-212ENST00000564641 TRAV9-2A0A087WT02 112 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 CXorf51AA0A1B0GTR3 108 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 TEX48A0A1B0GUV7 120 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 TMEM218A2RU14 115 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 C9orf170A2RU37 121 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 RFPL4AA6NLU0 287 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 F5H5T6 163 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 RFPL4AL1F8VTS6 287 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 PRAMEF26H0Y7S4 382 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 UBFD1O14562 309 aaKnown RBP2.93□□□□□ -1.94
CHD9-212ENST00000564641 IMPA2O14732 288 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 CASKO14936 926 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 SC5DO75845 299 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 AQP8O94778 261 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 SIX6O95475 246 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 ZNF682O95780 498 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 IFNA17P01571 189 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 TCRBP04435 133 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 UBBP0CG47 229 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 UBCP0CG48 685 aaKnown RBP2.93□□□□□ -1.94
CHD9-212ENST00000564641 SLC35E2BP0CK96 405 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 RD3LP0DJH9 198 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 ANXA8P13928 327 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 GABRA1P14867 456 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 ZNF14P17017 642 aaPredicted RBP2.93□□□□□ -1.94
CHD9-212ENST00000564641 CXCL2P19875 107 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 CXCL3P19876 107 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 NPR2P20594 1047 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 S100A2P29034 98 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 SLC6A1P30531 599 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 CCR7P32248 378 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 OMPP47874 163 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 HTR5AP47898 357 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 CSNK1EP49674 416 aaKnown RBP2.93□□□□□ -1.94
CHD9-212ENST00000564641 SULT1E1P49888 294 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 GNG10P50151 68 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 DIO3P55073 304 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 RAG2P55895 527 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 TAS2R39P59534 338 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 CDC42P60953 191 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 PKIAP61925 76 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 RPS27AP62979 156 aaKnown RBP2.93□□□□□ -1.94
CHD9-212ENST00000564641 UBA52P62987 128 aaKnown RBP2.93□□□□□ -1.94
CHD9-212ENST00000564641 FABP9Q0Z7S8 132 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 ZP4Q12836 540 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 EIF3IQ13347 325 aaKnown RBP2.93□□□□□ -1.94
CHD9-212ENST00000564641 C1DQ13901 141 aaKnown RBP2.93□□□□□ -1.94
CHD9-212ENST00000564641 GANABQ14697 944 aaKnown RBP2.93□□□□□ -1.94
CHD9-212ENST00000564641 SLC17A1Q14916 467 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 IRF4Q15306 451 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 CST6Q15828 149 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 SSX1Q16384 188 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 HNRNPA1L2Q32P51 320 aaKnown RBP2.93□□□□□ -1.94
CHD9-212ENST00000564641 MAJINQ3KP22 176 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 LINC01620Q4KN68 170 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 SPIN4Q56A73 249 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 ANXA8L1Q5VT79 327 aa2.93□□□□□ -1.94
CHD9-212ENST00000564641 MEDAGQ5VYS4 303 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms