RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 MED21Q13503 144 aa12.86□□□□□ -0.35
AC009088.3-201ENST00000563605 SMIM21Q3B7S5 101 aa12.86□□□□□ -0.35
AC009088.3-201ENST00000563605 C12orf54Q6X4T0 127 aa12.86□□□□□ -0.35
AC009088.3-201ENST00000563605 VMO1Q7Z5L0 202 aa12.86□□□□□ -0.35
AC009088.3-201ENST00000563605 SYS1Q8N2H4 156 aa12.86□□□□□ -0.35
AC009088.3-201ENST00000563605 CD177Q8N6Q3 437 aa12.86□□□□□ -0.35
AC009088.3-201ENST00000563605 ZNF676Q8N7Q3 588 aa12.86□□□□□ -0.35
AC009088.3-201ENST00000563605 LY6G5BQ8NDX9 201 aa12.86□□□□□ -0.35
AC009088.3-201ENST00000563605 OR10AC1Q8NH08 325 aa12.86□□□□□ -0.35
AC009088.3-201ENST00000563605 ADAT3Q96EY9 351 aaPredicted RBP12.86□□□□□ -0.35
AC009088.3-201ENST00000563605 BORCS8Q96FH0 119 aa12.86□□□□□ -0.35
AC009088.3-201ENST00000563605 VCX3BQ9H321 246 aa12.86□□□□□ -0.35
AC009088.3-201ENST00000563605 MRPS18AQ9NVS2 196 aaKnown RBP12.86□□□□□ -0.35
AC009088.3-201ENST00000563605 ERVK13-1Q9NX77 482 aa12.86□□□□□ -0.35
AC009088.3-201ENST00000563605 IGKV1-27A0A075B6S5 117 aa12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 A0A1W2PRD5 423 aa12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 A0A1W2PRF3 423 aa12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 A0A1W2PRM7 423 aa12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 E9PI62 339 aa12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 GPR37O15354 613 aa12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 OCM2P0CE71 109 aa12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 OCMP0CE72 109 aaPredicted RBP12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 PRTN3P24158 256 aa12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 GBX2P52951 348 aaPredicted RBP12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 DLX1P56177 255 aa12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 MRPL28Q13084 256 aaKnown RBP12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 ALKBH1Q13686 389 aaKnown RBP12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 PDCD1Q15116 288 aa12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 C11orf91Q3C1V1 193 aa12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 FDX2Q6P4F2 183 aa12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 C9orf139Q6ZV77 190 aa12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 CMTM4Q8IZR5 234 aa12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 OR51A4Q8NGJ6 313 aa12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 OR13C3Q8NGS6 347 aa12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 GATAD2BQ8WXI9 593 aa12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 SLAMF9Q96A28 289 aa12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 NRIP2Q9BQI9 281 aa12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 CHST5Q9GZS9 411 aa12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 SIRT7Q9NRC8 400 aa12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 CHCHD3Q9NX63 227 aaKnown RBP12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 ZNF222Q9UK12 451 aa12.85□□□□□ -0.35
AC009088.3-201ENST00000563605 IGHV1-69DA0A0B4J2H0 117 aa12.84□□□□□ -0.35
AC009088.3-201ENST00000563605 OR4C45A6NMZ5 311 aa12.84□□□□□ -0.35
AC009088.3-201ENST00000563605 F8VVB4 439 aa12.84□□□□□ -0.35
AC009088.3-201ENST00000563605 F8VWA3 439 aa12.84□□□□□ -0.35
AC009088.3-201ENST00000563605 HAX1O00165 279 aa12.84□□□□□ -0.35
AC009088.3-201ENST00000563605 IGHV1-69P01742 117 aa12.84□□□□□ -0.35
AC009088.3-201ENST00000563605 GNAO1P09471 354 aa12.84□□□□□ -0.35
AC009088.3-201ENST00000563605 DCKP27707 260 aa12.84□□□□□ -0.35
AC009088.3-201ENST00000563605 CCR9P51686 369 aa12.84□□□□□ -0.35
AC009088.3-201ENST00000563605 IL24Q13007 206 aa12.84□□□□□ -0.35
AC009088.3-201ENST00000563605 CNN3Q15417 329 aaKnown RBP12.84□□□□□ -0.35
AC009088.3-201ENST00000563605 TMPRSS11AQ6ZMR5 421 aa12.84□□□□□ -0.35
AC009088.3-201ENST00000563605 SLC25A26Q70HW3 274 aa12.84□□□□□ -0.35
AC009088.3-201ENST00000563605 FAM185AQ8N0U4 392 aa12.84□□□□□ -0.35
AC009088.3-201ENST00000563605 HAVCR2Q8TDQ0 301 aa12.84□□□□□ -0.35
AC009088.3-201ENST00000563605 SDSLQ96GA7 329 aa12.84□□□□□ -0.35
AC009088.3-201ENST00000563605 C1orf147Q96MC9 270 aaPredicted RBP12.84□□□□□ -0.35
AC009088.3-201ENST00000563605 PKIBQ9C010 78 aa12.84□□□□□ -0.35
AC009088.3-201ENST00000563605 FGF20Q9NP95 211 aaPredicted RBP12.84□□□□□ -0.35
AC009088.3-201ENST00000563605 MTCH1Q9NZJ7 389 aa12.84□□□□□ -0.35
AC009088.3-201ENST00000563605 HHLA2Q9UM44 414 aa12.84□□□□□ -0.35
AC009088.3-201ENST00000563605 EXOSC1Q9Y3B2 195 aaKnown RBP12.84□□□□□ -0.35
AC009088.3-201ENST00000563605 KPTNQ9Y664 436 aa12.84□□□□□ -0.35
AC009088.3-201ENST00000563605 SLC1A7O00341 560 aa12.83□□□□□ -0.36
AC009088.3-201ENST00000563605 HOXA3O43365 443 aaPredicted RBP12.83□□□□□ -0.36
AC009088.3-201ENST00000563605 NOS1APO75052 506 aaPredicted RBP12.83□□□□□ -0.36
AC009088.3-201ENST00000563605 ISG15P05161 165 aa12.83□□□□□ -0.36
AC009088.3-201ENST00000563605 CCDC159P0C7I6 412 aa12.83□□□□□ -0.36
AC009088.3-201ENST00000563605 CALCBP10092 127 aa12.83□□□□□ -0.36
AC009088.3-201ENST00000563605 ATF1P18846 271 aa12.83□□□□□ -0.36
AC009088.3-201ENST00000563605 MPZP25189 248 aa12.83□□□□□ -0.36
AC009088.3-201ENST00000563605 POU3F4P49335 361 aa12.83□□□□□ -0.36
AC009088.3-201ENST00000563605 GTF2A1P52655 376 aaPredicted RBP12.83□□□□□ -0.36
AC009088.3-201ENST00000563605 ATP1B3P54709 279 aa12.83□□□□□ -0.36
AC009088.3-201ENST00000563605 MTCP1P56278 107 aa12.83□□□□□ -0.36
AC009088.3-201ENST00000563605 SLC9A3R2Q15599 337 aa12.83□□□□□ -0.36
AC009088.3-201ENST00000563605 TUSC1Q2TAM9 212 aa12.83□□□□□ -0.36
AC009088.3-201ENST00000563605 EGFL6Q8IUX8 553 aa12.83□□□□□ -0.36
AC009088.3-201ENST00000563605 OR4M1Q8NGD0 313 aa12.83□□□□□ -0.36
AC009088.3-201ENST00000563605 PP6455Q8WZ26 134 aa12.83□□□□□ -0.36
AC009088.3-201ENST00000563605 TAF15Q92804 592 aaKnown RBP eCLIP12.83□□□□□ -0.36
AC009088.3-201ENST00000563605 SLC25A28Q96A46 364 aa12.83□□□□□ -0.36
AC009088.3-201ENST00000563605 RFT1Q96AA3 541 aa12.83□□□□□ -0.36
AC009088.3-201ENST00000563605 C10orf35Q96D05 121 aa12.83□□□□□ -0.36
AC009088.3-201ENST00000563605 CEP19Q96LK0 163 aa12.83□□□□□ -0.36
AC009088.3-201ENST00000563605 ZNF649Q9BS31 505 aa12.83□□□□□ -0.36
AC009088.3-201ENST00000563605 JAM3Q9BX67 310 aa12.83□□□□□ -0.36
AC009088.3-201ENST00000563605 COMMD4Q9H0A8 199 aa12.83□□□□□ -0.36
AC009088.3-201ENST00000563605 IGKV1-9A0A0C4DH69 117 aa12.82□□□□□ -0.36
AC009088.3-201ENST00000563605 TMEM89A2RUT3 159 aa12.82□□□□□ -0.36
AC009088.3-201ENST00000563605 EFCAB10A6NFE3 127 aa12.82□□□□□ -0.36
AC009088.3-201ENST00000563605 RPSAP08865 295 aaKnown RBP12.82□□□□□ -0.36
AC009088.3-201ENST00000563605 LIMS3P0CW19 117 aa12.82□□□□□ -0.36
AC009088.3-201ENST00000563605 LIMS4P0CW20 117 aa12.82□□□□□ -0.36
AC009088.3-201ENST00000563605 AZGP1P25311 298 aaKnown RBP12.82□□□□□ -0.36
AC009088.3-201ENST00000563605 RBP2P50120 134 aa12.82□□□□□ -0.36
AC009088.3-201ENST00000563605 ETV1P50549 477 aa12.82□□□□□ -0.36
AC009088.3-201ENST00000563605 AQP4P55087 323 aa12.82□□□□□ -0.36
AC009088.3-201ENST00000563605 CAV3P56539 151 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms