RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 ADRA2CP18825 462 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 PCMT1P22061 227 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 GLRA1P23415 457 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 GATA3P23771 443 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 CRHBPP24387 322 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 AZGP1P25311 298 aaKnown RBP7.08□□□□□ -1.28
UBR1-204ENST00000563239 VHLP40337 213 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 HSPA13P48723 471 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 NPY4RP50391 375 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 IL24Q13007 206 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 CNN3Q15417 329 aaKnown RBP7.08□□□□□ -1.28
UBR1-204ENST00000563239 DGUOKQ16854 277 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 NLRC3Q7RTR2 1065 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 C1QL2Q7Z5L3 287 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 BATF2Q8N1L9 274 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 OR13C9Q8NGT0 318 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 RAB40AQ8WXH6 277 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 CNBD2Q96M20 576 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 COMMD4Q9H0A8 199 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 DNTTIP1Q9H147 329 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 ZCCHC4Q9H5U6 513 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 C7orf69Q9H7B7 122 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 RASL12Q9NYN1 266 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 NLKQ9UBE8 527 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 OR5V1Q9UGF6 321 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 RAB26Q9ULW5 256 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 MAB21L2Q9Y586 359 aa7.08□□□□□ -1.28
UBR1-204ENST00000563239 IGKV1-12A0A0C4DH73 117 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 SIGLEC5O15389 551 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 IGKV1D-12P01611 117 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 CD1AP06126 327 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 RPSAP08865 295 aaKnown RBP7.07□□□□□ -1.28
UBR1-204ENST00000563239 SRD5A1P18405 259 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 HNF1AP20823 631 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 PRKACBP22694 351 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 NPBWR2P48146 333 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 SOX2P48431 317 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 RBP2P50120 134 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 MTCP1P56278 107 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 WNT4P56705 351 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 ACSM1Q08AH1 577 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 MED21Q13503 144 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 KLF17Q5JT82 389 aaPredicted RBP7.07□□□□□ -1.28
UBR1-204ENST00000563239 SLC25A26Q70HW3 274 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 BTN2A1Q7KYR7 527 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 SERPINA12Q8IW75 414 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 LY6G5BQ8NDX9 201 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 OR51A2Q8NGJ7 313 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 GPR148Q8TDV2 347 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 MYDGFQ969H8 173 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 SLAMF9Q96A28 289 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 SPSB1Q96BD6 273 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 TMIGD2Q96BF3 282 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 ORAI1Q96D31 301 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 BORCS8Q96FH0 119 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 SDSLQ96GA7 329 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 OPALINQ96PE5 141 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 SPACA5Q96QH8 159 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 OR5M11Q96RB7 305 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 NUDT16L1Q9BRJ7 211 aaKnown RBP7.07□□□□□ -1.28
UBR1-204ENST00000563239 CHCHD3Q9NX63 227 aaKnown RBP7.07□□□□□ -1.28
UBR1-204ENST00000563239 SCN3BQ9NY72 215 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 DNAJB11Q9UBS4 358 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 DHDHQ9UQ10 334 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 POLDIP2Q9Y2S7 368 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 ZNF281Q9Y2X9 895 aa7.07□□□□□ -1.28
UBR1-204ENST00000563239 WNK2Q9Y3S1 2297 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 TRBV5-7A0A0A0MS05 114 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 PNMA8CA0A1B0GUJ8 204 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 RFPL4AA6NLU0 287 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 RFPL4AL1F8VTS6 287 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 MYL12BO14950 172 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 PIN1P1O15428 100 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 DENRO43583 198 aaKnown RBP7.06□□□□□ -1.28
UBR1-204ENST00000563239 SPRY1O43609 319 aaPredicted RBP7.06□□□□□ -1.28
UBR1-204ENST00000563239 SULT1B1O43704 296 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 INMTO95050 263 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 NXPH2O95156 264 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 PLATP00750 562 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 MMP9P14780 707 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 IGFBP3P17936 291 aaPredicted RBP7.06□□□□□ -1.28
UBR1-204ENST00000563239 BCL3P20749 454 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 PRDX2P32119 198 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 CEBPDP49716 269 aaPredicted RBP7.06□□□□□ -1.28
UBR1-204ENST00000563239 ATP1B3P54709 279 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 ZP1P60852 638 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 IL13RA1P78552 427 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 BDH1Q02338 343 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 PDZK1IP1Q13113 114 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 IKZF1Q13422 519 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 C11orf91Q3C1V1 193 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 YIF1BQ5BJH7 314 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 LHFPL2Q6ZUX7 228 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 SLC36A1Q7Z2H8 476 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 ZNRF1Q8ND25 227 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 OR5D14Q8NGL3 314 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 TSEN15Q8WW01 171 aaKnown RBP7.06□□□□□ -1.28
UBR1-204ENST00000563239 ST8SIA4Q92187 359 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 TMEM106AQ96A25 262 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 RFT1Q96AA3 541 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms