RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 ALG8Q9BVK2 526 aa19.6■□□□□ 0.73
CDR2-202ENST00000561630 NOX4Q9NPH5 578 aa19.6■□□□□ 0.73
CDR2-202ENST00000561630 INPP5EQ9NRR6 644 aa19.6■□□□□ 0.73
CDR2-202ENST00000561630 RPL36Q9Y3U8 105 aaKnown RBP19.6■□□□□ 0.73
CDR2-202ENST00000561630 IGKV1-27A0A075B6S5 117 aa19.59■□□□□ 0.73
CDR2-202ENST00000561630 TRBV23-1A0A0A0MS06 115 aa19.59■□□□□ 0.73
CDR2-202ENST00000561630 METAP1DQ6UB28 335 aaPredicted RBP19.59■□□□□ 0.73
CDR2-202ENST00000561630 C1orf122Q6ZSJ8 110 aa19.59■□□□□ 0.73
CDR2-202ENST00000561630 ZNF561Q8N587 486 aa19.59■□□□□ 0.73
CDR2-202ENST00000561630 Q8N7P7 452 aa19.59■□□□□ 0.73
CDR2-202ENST00000561630 ZNF555Q8NEP9 628 aa19.59■□□□□ 0.73
CDR2-202ENST00000561630 ADAT3Q96EY9 351 aaPredicted RBP19.59■□□□□ 0.73
CDR2-202ENST00000561630 ZNF649Q9BS31 505 aa19.59■□□□□ 0.73
CDR2-202ENST00000561630 ELL3Q9HB65 397 aaPredicted RBP19.59■□□□□ 0.73
CDR2-202ENST00000561630 OR4C45A6NMZ5 311 aa19.58■□□□□ 0.72
CDR2-202ENST00000561630 HAX1O00165 279 aa19.58■□□□□ 0.72
CDR2-202ENST00000561630 HOXA3O43365 443 aaPredicted RBP19.58■□□□□ 0.72
CDR2-202ENST00000561630 HKR1P10072 659 aa19.58■□□□□ 0.72
CDR2-202ENST00000561630 ALKBH1Q13686 389 aaKnown RBP19.58■□□□□ 0.72
CDR2-202ENST00000561630 CNN3Q15417 329 aaKnown RBP19.58■□□□□ 0.72
CDR2-202ENST00000561630 LPCAT4Q643R3 524 aa19.58■□□□□ 0.72
CDR2-202ENST00000561630 Q6YL49 198 aa19.58■□□□□ 0.72
CDR2-202ENST00000561630 UTS2BQ765I0 119 aa19.58■□□□□ 0.72
CDR2-202ENST00000561630 DNAAF1Q8NEP3 725 aa19.58■□□□□ 0.72
CDR2-202ENST00000561630 BORCS8Q96FH0 119 aa19.58■□□□□ 0.72
CDR2-202ENST00000561630 ISG20L2Q9H9L3 353 aaKnown RBP19.58■□□□□ 0.72
CDR2-202ENST00000561630 ERVK13-1Q9NX77 482 aa19.58■□□□□ 0.72
CDR2-202ENST00000561630 MTCH1Q9NZJ7 389 aa19.58■□□□□ 0.72
CDR2-202ENST00000561630 HHLA2Q9UM44 414 aa19.58■□□□□ 0.72
CDR2-202ENST00000561630 A0A1W2PQ09 198 aa19.57■□□□□ 0.72
CDR2-202ENST00000561630 M0R1W7 72 aa19.57■□□□□ 0.72
CDR2-202ENST00000561630 SLC1A7O00341 560 aa19.57■□□□□ 0.72
CDR2-202ENST00000561630 WBP4O75554 376 aaKnown RBP19.57■□□□□ 0.72
CDR2-202ENST00000561630 CFPP27918 469 aa19.57■□□□□ 0.72
CDR2-202ENST00000561630 CAPZA1P52907 286 aa19.57■□□□□ 0.72
CDR2-202ENST00000561630 KLHL22Q53GT1 634 aa19.57■□□□□ 0.72
CDR2-202ENST00000561630 PDZD9Q8IXQ8 264 aa19.57■□□□□ 0.72
CDR2-202ENST00000561630 BATF2Q8N1L9 274 aa19.57■□□□□ 0.72
CDR2-202ENST00000561630 OR52I1Q8NGK6 324 aa19.57■□□□□ 0.72
CDR2-202ENST00000561630 FGGYQ96C11 551 aa19.57■□□□□ 0.72
CDR2-202ENST00000561630 C8orf4Q9NR00 106 aa19.57■□□□□ 0.72
CDR2-202ENST00000561630 SIRT7Q9NRC8 400 aa19.57■□□□□ 0.72
CDR2-202ENST00000561630 IGKV1-9A0A0C4DH69 117 aa19.56■□□□□ 0.72
CDR2-202ENST00000561630 KNG1P01042 644 aa19.56■□□□□ 0.72
CDR2-202ENST00000561630 ZNF20P17024 532 aa19.56■□□□□ 0.72
CDR2-202ENST00000561630 CEBPDP49716 269 aaPredicted RBP19.56■□□□□ 0.72
CDR2-202ENST00000561630 RBP2P50120 134 aa19.56■□□□□ 0.72
CDR2-202ENST00000561630 LRRC36Q1X8D7 754 aa19.56■□□□□ 0.72
CDR2-202ENST00000561630 AWAT1Q58HT5 328 aa19.56■□□□□ 0.72
CDR2-202ENST00000561630 PIP4P2Q8N4L2 257 aa19.56■□□□□ 0.72
CDR2-202ENST00000561630 PACRGLQ8N7B6 248 aa19.56■□□□□ 0.72
CDR2-202ENST00000561630 OR51A4Q8NGJ6 313 aa19.56■□□□□ 0.72
CDR2-202ENST00000561630 OR10AC1Q8NH08 325 aa19.56■□□□□ 0.72
CDR2-202ENST00000561630 TNFRSF14Q92956 283 aa19.56■□□□□ 0.72
CDR2-202ENST00000561630 CEP19Q96LK0 163 aa19.56■□□□□ 0.72
CDR2-202ENST00000561630 METTL8Q9H825 291 aaKnown RBP19.56■□□□□ 0.72
CDR2-202ENST00000561630 UNKLQ9H9P5 680 aaKnown RBP19.56■□□□□ 0.72
CDR2-202ENST00000561630 NBEAL1Q6ZS30 2694 aa19.56■□□□□ 0.72
CDR2-202ENST00000561630 F8VVB4 439 aa19.55■□□□□ 0.72
CDR2-202ENST00000561630 F8VWA3 439 aa19.55■□□□□ 0.72
CDR2-202ENST00000561630 MELTFP08582 738 aa19.55■□□□□ 0.72
CDR2-202ENST00000561630 PRKACBP22694 351 aa19.55■□□□□ 0.72
CDR2-202ENST00000561630 GUCA2AQ02747 115 aa19.55■□□□□ 0.72
CDR2-202ENST00000561630 FOXL1Q12952 345 aa19.55■□□□□ 0.72
CDR2-202ENST00000561630 MRPL28Q13084 256 aaKnown RBP19.55■□□□□ 0.72
CDR2-202ENST00000561630 RCN1Q15293 331 aa19.55■□□□□ 0.72
CDR2-202ENST00000561630 SMN1Q16637 294 aaKnown RBP19.55■□□□□ 0.72
CDR2-202ENST00000561630 ZNF691Q5VV52 312 aa19.55■□□□□ 0.72
CDR2-202ENST00000561630 C16orf87Q6PH81 154 aa19.55■□□□□ 0.72
CDR2-202ENST00000561630 SLC25A26Q70HW3 274 aa19.55■□□□□ 0.72
CDR2-202ENST00000561630 TMEM86BQ8N661 226 aa19.55■□□□□ 0.72
CDR2-202ENST00000561630 ZNF676Q8N7Q3 588 aa19.55■□□□□ 0.72
CDR2-202ENST00000561630 SLAMF9Q96A28 289 aa19.55■□□□□ 0.72
CDR2-202ENST00000561630 JAM3Q9BX67 310 aa19.55■□□□□ 0.72
CDR2-202ENST00000561630 OR14J1Q9UGF5 321 aa19.55■□□□□ 0.72
CDR2-202ENST00000561630 A0A0U1RQK1 487 aa19.54■□□□□ 0.72
CDR2-202ENST00000561630 RNASEK-C17orf49H0YIS7 233 aa19.54■□□□□ 0.72
CDR2-202ENST00000561630 ATF1P18846 271 aa19.54■□□□□ 0.72
CDR2-202ENST00000561630 ATP1B3P54709 279 aa19.54■□□□□ 0.72
CDR2-202ENST00000561630 BLMHQ13867 455 aa19.54■□□□□ 0.72
CDR2-202ENST00000561630 TTC23Q5W5X9 447 aa19.54■□□□□ 0.72
CDR2-202ENST00000561630 C3orf56Q8N813 242 aa19.54■□□□□ 0.72
CDR2-202ENST00000561630 OR13C3Q8NGS6 347 aa19.54■□□□□ 0.72
CDR2-202ENST00000561630 SPSB1Q96BD6 273 aa19.54■□□□□ 0.72
CDR2-202ENST00000561630 FGF20Q9NP95 211 aaPredicted RBP19.54■□□□□ 0.72
CDR2-202ENST00000561630 C19orf12Q9NSK7 152 aa19.54■□□□□ 0.72
CDR2-202ENST00000561630 E9PI62 339 aa19.53■□□□□ 0.72
CDR2-202ENST00000561630 CLIC3O95833 236 aa19.53■□□□□ 0.72
CDR2-202ENST00000561630 RPSAP08865 295 aaKnown RBP19.53■□□□□ 0.72
CDR2-202ENST00000561630 LIMS3P0CW19 117 aa19.53■□□□□ 0.72
CDR2-202ENST00000561630 LIMS4P0CW20 117 aa19.53■□□□□ 0.72
CDR2-202ENST00000561630 AZGP1P25311 298 aaKnown RBP19.53■□□□□ 0.72
CDR2-202ENST00000561630 PEX2P28328 305 aa19.53■□□□□ 0.72
CDR2-202ENST00000561630 DLX1P56177 255 aa19.53■□□□□ 0.72
CDR2-202ENST00000561630 MTCP1P56278 107 aa19.53■□□□□ 0.72
CDR2-202ENST00000561630 RPL31P62899 125 aaKnown RBP19.53■□□□□ 0.72
CDR2-202ENST00000561630 PRB3Q04118 309 aaPredicted RBP19.53■□□□□ 0.72
CDR2-202ENST00000561630 FAM185AQ8N0U4 392 aa19.53■□□□□ 0.72
CDR2-202ENST00000561630 HAVCR2Q8TDQ0 301 aa19.53■□□□□ 0.72
CDR2-202ENST00000561630 SSMEM1Q8WWF3 244 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms