RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 GATAD2BQ8WXI9 593 aa12.74□□□□□ -0.37
CCDC113-203ENST00000561517 H1FXQ92522 213 aaKnown RBP12.74□□□□□ -0.37
CCDC113-203ENST00000561517 GCDHQ92947 438 aaPredicted RBP12.74□□□□□ -0.37
CCDC113-203ENST00000561517 ADAT3Q96EY9 351 aaPredicted RBP12.74□□□□□ -0.37
CCDC113-203ENST00000561517 ONECUT1Q9UBC0 465 aa12.74□□□□□ -0.37
CCDC113-203ENST00000561517 ANK2Q01484 3957 aa12.73□□□□□ -0.37
CCDC113-203ENST00000561517 MDFIC2A0A1B0GVS7 189 aa12.73□□□□□ -0.37
CCDC113-203ENST00000561517 NXPH2O95156 264 aa12.73□□□□□ -0.37
CCDC113-203ENST00000561517 RNASE1P07998 156 aaKnown RBP12.73□□□□□ -0.37
CCDC113-203ENST00000561517 NDUFB7P17568 137 aa12.73□□□□□ -0.37
CCDC113-203ENST00000561517 PRDX2P32119 198 aa12.73□□□□□ -0.37
CCDC113-203ENST00000561517 RCN1Q15293 331 aa12.73□□□□□ -0.37
CCDC113-203ENST00000561517 CNN3Q15417 329 aaKnown RBP12.73□□□□□ -0.37
CCDC113-203ENST00000561517 SLC9A3R2Q15599 337 aa12.73□□□□□ -0.37
CCDC113-203ENST00000561517 LRRC36Q1X8D7 754 aa12.73□□□□□ -0.37
CCDC113-203ENST00000561517 KLHL22Q53GT1 634 aa12.73□□□□□ -0.37
CCDC113-203ENST00000561517 ZNF691Q5VV52 312 aa12.73□□□□□ -0.37
CCDC113-203ENST00000561517 C12orf54Q6X4T0 127 aa12.73□□□□□ -0.37
CCDC113-203ENST00000561517 ZNF561Q8N587 486 aa12.73□□□□□ -0.37
CCDC113-203ENST00000561517 Q8N7P7 452 aa12.73□□□□□ -0.37
CCDC113-203ENST00000561517 DNAAF1Q8NEP3 725 aa12.73□□□□□ -0.37
CCDC113-203ENST00000561517 TMEM185AQ8NFB2 350 aa12.73□□□□□ -0.37
CCDC113-203ENST00000561517 OR10AC1Q8NH08 325 aa12.73□□□□□ -0.37
CCDC113-203ENST00000561517 LHX4Q969G2 390 aa12.73□□□□□ -0.37
CCDC113-203ENST00000561517 BORCS8Q96FH0 119 aa12.73□□□□□ -0.37
CCDC113-203ENST00000561517 DUX5Q96PT3 197 aa12.73□□□□□ -0.37
CCDC113-203ENST00000561517 JAM3Q9BX67 310 aa12.73□□□□□ -0.37
CCDC113-203ENST00000561517 ISG20L2Q9H9L3 353 aaKnown RBP12.73□□□□□ -0.37
CCDC113-203ENST00000561517 NOX4Q9NPH5 578 aa12.73□□□□□ -0.37
CCDC113-203ENST00000561517 HHLA2Q9UM44 414 aa12.73□□□□□ -0.37
CCDC113-203ENST00000561517 KIAA2026Q5HYC2 2103 aa12.73□□□□□ -0.37
CCDC113-203ENST00000561517 TRBV23-1A0A0A0MS06 115 aa12.72□□□□□ -0.37
CCDC113-203ENST00000561517 IGKV1-9A0A0C4DH69 117 aa12.72□□□□□ -0.37
CCDC113-203ENST00000561517 M0R1W7 72 aa12.72□□□□□ -0.37
CCDC113-203ENST00000561517 ATF1P18846 271 aa12.72□□□□□ -0.37
CCDC113-203ENST00000561517 PEX2P28328 305 aa12.72□□□□□ -0.37
CCDC113-203ENST00000561517 MRPL28Q13084 256 aaKnown RBP12.72□□□□□ -0.37
CCDC113-203ENST00000561517 SMN1Q16637 294 aaKnown RBP12.72□□□□□ -0.37
CCDC113-203ENST00000561517 TTC23Q5W5X9 447 aa12.72□□□□□ -0.37
CCDC113-203ENST00000561517 OR51A4Q8NGJ6 313 aa12.72□□□□□ -0.37
CCDC113-203ENST00000561517 SLC25A28Q96A46 364 aa12.72□□□□□ -0.37
CCDC113-203ENST00000561517 FGGYQ96C11 551 aa12.72□□□□□ -0.37
CCDC113-203ENST00000561517 UNKLQ9H9P5 680 aaKnown RBP12.72□□□□□ -0.37
CCDC113-203ENST00000561517 ELL3Q9HB65 397 aaPredicted RBP12.72□□□□□ -0.37
CCDC113-203ENST00000561517 FGF20Q9NP95 211 aaPredicted RBP12.72□□□□□ -0.37
CCDC113-203ENST00000561517 MTCH1Q9NZJ7 389 aa12.72□□□□□ -0.37
CCDC113-203ENST00000561517 FBN3Q75N90 2809 aa12.72□□□□□ -0.37
CCDC113-203ENST00000561517 SLC1A7O00341 560 aa12.71□□□□□ -0.37
CCDC113-203ENST00000561517 CLIC3O95833 236 aa12.71□□□□□ -0.37
CCDC113-203ENST00000561517 KNG1P01042 644 aa12.71□□□□□ -0.37
CCDC113-203ENST00000561517 LIMS3P0CW19 117 aa12.71□□□□□ -0.37
CCDC113-203ENST00000561517 LIMS4P0CW20 117 aa12.71□□□□□ -0.37
CCDC113-203ENST00000561517 HKR1P10072 659 aa12.71□□□□□ -0.37
CCDC113-203ENST00000561517 ZNF20P17024 532 aa12.71□□□□□ -0.37
CCDC113-203ENST00000561517 PRKACBP22694 351 aa12.71□□□□□ -0.37
CCDC113-203ENST00000561517 CEBPDP49716 269 aaPredicted RBP12.71□□□□□ -0.37
CCDC113-203ENST00000561517 RBP2P50120 134 aa12.71□□□□□ -0.37
CCDC113-203ENST00000561517 ATP1B3P54709 279 aa12.71□□□□□ -0.37
CCDC113-203ENST00000561517 ADARB1P78563 741 aaKnown RBP12.71□□□□□ -0.37
CCDC113-203ENST00000561517 Q6YL49 198 aa12.71□□□□□ -0.37
CCDC113-203ENST00000561517 BATF2Q8N1L9 274 aa12.71□□□□□ -0.37
CCDC113-203ENST00000561517 ZNF676Q8N7Q3 588 aa12.71□□□□□ -0.37
CCDC113-203ENST00000561517 HAVCR2Q8TDQ0 301 aa12.71□□□□□ -0.37
CCDC113-203ENST00000561517 TNFRSF14Q92956 283 aa12.71□□□□□ -0.37
CCDC113-203ENST00000561517 ZDHHC16Q969W1 377 aa12.71□□□□□ -0.37
CCDC113-203ENST00000561517 CEP19Q96LK0 163 aa12.71□□□□□ -0.37
CCDC113-203ENST00000561517 SIRT7Q9NRC8 400 aa12.71□□□□□ -0.37
CCDC113-203ENST00000561517 A0A1W2PQ09 198 aa12.7□□□□□ -0.38
CCDC113-203ENST00000561517 TMEM212A6NML5 194 aa12.7□□□□□ -0.38
CCDC113-203ENST00000561517 E9PI62 339 aa12.7□□□□□ -0.38
CCDC113-203ENST00000561517 F8VVB4 439 aa12.7□□□□□ -0.38
CCDC113-203ENST00000561517 F8VWA3 439 aa12.7□□□□□ -0.38
CCDC113-203ENST00000561517 RNASEK-C17orf49H0YIS7 233 aa12.7□□□□□ -0.38
CCDC113-203ENST00000561517 CASQ2O14958 399 aaPredicted RBP12.7□□□□□ -0.38
CCDC113-203ENST00000561517 ZFPL1O95159 310 aa12.7□□□□□ -0.38
CCDC113-203ENST00000561517 MT-ND2P03891 347 aa12.7□□□□□ -0.38
CCDC113-203ENST00000561517 RPSAP08865 295 aaKnown RBP12.7□□□□□ -0.38
CCDC113-203ENST00000561517 AZGP1P25311 298 aaKnown RBP12.7□□□□□ -0.38
CCDC113-203ENST00000561517 DCKP27707 260 aa12.7□□□□□ -0.38
CCDC113-203ENST00000561517 CAPZA1P52907 286 aa12.7□□□□□ -0.38
CCDC113-203ENST00000561517 GBX2P52951 348 aaPredicted RBP12.7□□□□□ -0.38
CCDC113-203ENST00000561517 OGFRL1Q5TC84 451 aaPredicted RBP12.7□□□□□ -0.38
CCDC113-203ENST00000561517 SLC25A26Q70HW3 274 aa12.7□□□□□ -0.38
CCDC113-203ENST00000561517 PIP4P2Q8N4L2 257 aa12.7□□□□□ -0.38
CCDC113-203ENST00000561517 DHRSXQ8N5I4 330 aa12.7□□□□□ -0.38
CCDC113-203ENST00000561517 OR13C3Q8NGS6 347 aa12.7□□□□□ -0.38
CCDC113-203ENST00000561517 CNIH3Q8TBE1 160 aa12.7□□□□□ -0.38
CCDC113-203ENST00000561517 CYGBQ8WWM9 190 aa12.7□□□□□ -0.38
CCDC113-203ENST00000561517 SLAMF9Q96A28 289 aa12.7□□□□□ -0.38
CCDC113-203ENST00000561517 SPSB1Q96BD6 273 aa12.7□□□□□ -0.38
CCDC113-203ENST00000561517 FAM234AQ9H0X4 552 aa12.7□□□□□ -0.38
CCDC113-203ENST00000561517 METTL8Q9H825 291 aaKnown RBP12.7□□□□□ -0.38
CCDC113-203ENST00000561517 SEBOXQ9HB31 216 aaPredicted RBP12.7□□□□□ -0.38
CCDC113-203ENST00000561517 C19orf12Q9NSK7 152 aa12.7□□□□□ -0.38
CCDC113-203ENST00000561517 OR14J1Q9UGF5 321 aa12.7□□□□□ -0.38
CCDC113-203ENST00000561517 HOXA3O43365 443 aaPredicted RBP12.69□□□□□ -0.38
CCDC113-203ENST00000561517 MELTFP08582 738 aa12.69□□□□□ -0.38
CCDC113-203ENST00000561517 CCDC159P0C7I6 412 aa12.69□□□□□ -0.38
CCDC113-203ENST00000561517 CFPP27918 469 aa12.69□□□□□ -0.38
CCDC113-203ENST00000561517 GUCA2AQ02747 115 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms