RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 C10orf35Q96D05 121 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 PGLYRP3Q96LB9 341 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 ANKRD60Q9BZ19 345 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 PKIBQ9C010 78 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 TRIM36Q9NQ86 728 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 SLC7A11Q9UPY5 501 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 PNMA8CA0A1B0GUJ8 204 aa11.49□□□□□ -0.57
TPM1-230ENST00000561266 RFPL4AA6NLU0 287 aa11.49□□□□□ -0.57
TPM1-230ENST00000561266 RFPL4AL1F8VTS6 287 aa11.49□□□□□ -0.57
TPM1-230ENST00000561266 SPRY1O43609 319 aaPredicted RBP11.49□□□□□ -0.57
TPM1-230ENST00000561266 GATBO75879 557 aaKnown RBP11.49□□□□□ -0.57
TPM1-230ENST00000561266 RGS9O75916 674 aaPredicted RBP11.49□□□□□ -0.57
TPM1-230ENST00000561266 SFTPBP07988 381 aa11.49□□□□□ -0.57
TPM1-230ENST00000561266 ACAA1P09110 424 aaPredicted RBP11.49□□□□□ -0.57
TPM1-230ENST00000561266 CCDC159P0C7I6 412 aa11.49□□□□□ -0.57
TPM1-230ENST00000561266 IGHV4-38-2P0DP08 117 aa11.49□□□□□ -0.57
TPM1-230ENST00000561266 ZNF20P17024 532 aa11.49□□□□□ -0.57
TPM1-230ENST00000561266 PCMT1P22061 227 aa11.49□□□□□ -0.57
TPM1-230ENST00000561266 GATA3P23771 443 aa11.49□□□□□ -0.57
TPM1-230ENST00000561266 GABRA2P47869 451 aa11.49□□□□□ -0.57
TPM1-230ENST00000561266 DLX1P56177 255 aa11.49□□□□□ -0.57
TPM1-230ENST00000561266 IL24Q13007 206 aa11.49□□□□□ -0.57
TPM1-230ENST00000561266 MRPL28Q13084 256 aaKnown RBP11.49□□□□□ -0.57
TPM1-230ENST00000561266 KCNJ8Q15842 424 aa11.49□□□□□ -0.57
TPM1-230ENST00000561266 ZNF529Q6P280 563 aa11.49□□□□□ -0.57
TPM1-230ENST00000561266 SLC25A26Q70HW3 274 aa11.49□□□□□ -0.57
TPM1-230ENST00000561266 BCL6BQ8N143 479 aaPredicted RBP11.49□□□□□ -0.57
TPM1-230ENST00000561266 STX19Q8N4C7 294 aa11.49□□□□□ -0.57
TPM1-230ENST00000561266 PARP16Q8N5Y8 322 aa11.49□□□□□ -0.57
TPM1-230ENST00000561266 OR51A2Q8NGJ7 313 aa11.49□□□□□ -0.57
TPM1-230ENST00000561266 C22orf15Q8WYQ4 148 aa11.49□□□□□ -0.57
TPM1-230ENST00000561266 OR5M11Q96RB7 305 aa11.49□□□□□ -0.57
TPM1-230ENST00000561266 AUP1Q9Y679 476 aa11.49□□□□□ -0.57
TPM1-230ENST00000561266 SIGLEC5O15389 551 aa11.48□□□□□ -0.57
TPM1-230ENST00000561266 ANGPTL7O43827 346 aa11.48□□□□□ -0.57
TPM1-230ENST00000561266 MMP9P14780 707 aa11.48□□□□□ -0.57
TPM1-230ENST00000561266 BCL3P20749 454 aa11.48□□□□□ -0.57
TPM1-230ENST00000561266 NPY4RP50391 375 aa11.48□□□□□ -0.57
TPM1-230ENST00000561266 MTCP1P56278 107 aa11.48□□□□□ -0.57
TPM1-230ENST00000561266 FGF12P61328 243 aa11.48□□□□□ -0.57
TPM1-230ENST00000561266 SLC35A2P78381 396 aa11.48□□□□□ -0.57
TPM1-230ENST00000561266 PRB3Q04118 309 aaPredicted RBP11.48□□□□□ -0.57
TPM1-230ENST00000561266 IRF3Q14653 427 aa11.48□□□□□ -0.57
TPM1-230ENST00000561266 CCDC58Q4VC31 144 aa11.48□□□□□ -0.57
TPM1-230ENST00000561266 LY6G5BQ8NDX9 201 aa11.48□□□□□ -0.57
TPM1-230ENST00000561266 DNAAF1Q8NEP3 725 aa11.48□□□□□ -0.57
TPM1-230ENST00000561266 OR5D18Q8NGL1 313 aa11.48□□□□□ -0.57
TPM1-230ENST00000561266 GHSRQ92847 366 aa11.48□□□□□ -0.57
TPM1-230ENST00000561266 SMIM19Q96E16 107 aa11.48□□□□□ -0.57
TPM1-230ENST00000561266 BORCS8Q96FH0 119 aa11.48□□□□□ -0.57
TPM1-230ENST00000561266 TBX15Q96SF7 602 aa11.48□□□□□ -0.57
TPM1-230ENST00000561266 COMMD4Q9H0A8 199 aa11.48□□□□□ -0.57
TPM1-230ENST00000561266 ZCCHC4Q9H5U6 513 aa11.48□□□□□ -0.57
TPM1-230ENST00000561266 TAS2R4Q9NYW5 299 aa11.48□□□□□ -0.57
TPM1-230ENST00000561266 RPUSD1Q9UJJ7 312 aaKnown RBP11.48□□□□□ -0.57
TPM1-230ENST00000561266 LSM2Q9Y333 95 aaKnown RBP11.48□□□□□ -0.57
TPM1-230ENST00000561266 RRP15Q9Y3B9 282 aaKnown RBP11.48□□□□□ -0.57
TPM1-230ENST00000561266 TRBV5-5A0A0J9YX44 114 aa11.47□□□□□ -0.57
TPM1-230ENST00000561266 NXPH2O95156 264 aa11.47□□□□□ -0.57
TPM1-230ENST00000561266 SERPINA3P01011 423 aa11.47□□□□□ -0.57
TPM1-230ENST00000561266 MT-ND2P03891 347 aa11.47□□□□□ -0.57
TPM1-230ENST00000561266 EPHA1P21709 976 aa11.47□□□□□ -0.57
TPM1-230ENST00000561266 POU3F4P49335 361 aa11.47□□□□□ -0.57
TPM1-230ENST00000561266 RBP2P50120 134 aa11.47□□□□□ -0.57
TPM1-230ENST00000561266 ATP1B3P54709 279 aa11.47□□□□□ -0.57
TPM1-230ENST00000561266 CNN3Q15417 329 aaKnown RBP11.47□□□□□ -0.57
TPM1-230ENST00000561266 TUSC1Q2TAM9 212 aa11.47□□□□□ -0.57
TPM1-230ENST00000561266 SLC36A1Q7Z2H8 476 aa11.47□□□□□ -0.57
TPM1-230ENST00000561266 TSEN15Q8WW01 171 aaKnown RBP11.47□□□□□ -0.57
TPM1-230ENST00000561266 SDSLQ96GA7 329 aa11.47□□□□□ -0.57
TPM1-230ENST00000561266 CNBD2Q96M20 576 aa11.47□□□□□ -0.57
TPM1-230ENST00000561266 OPALINQ96PE5 141 aa11.47□□□□□ -0.57
TPM1-230ENST00000561266 MYCBPQ99417 103 aaPredicted RBP11.47□□□□□ -0.57
TPM1-230ENST00000561266 SIRPDQ9H106 197 aa11.47□□□□□ -0.57
TPM1-230ENST00000561266 DNTTIP1Q9H147 329 aa11.47□□□□□ -0.57
TPM1-230ENST00000561266 DUSP21Q9H596 190 aa11.47□□□□□ -0.57
TPM1-230ENST00000561266 RBFOX1Q9NWB1 397 aaKnown RBP11.47□□□□□ -0.57
TPM1-230ENST00000561266 RASL12Q9NYN1 266 aa11.47□□□□□ -0.57
TPM1-230ENST00000561266 ZNF69Q9UC07 566 aa11.47□□□□□ -0.57
TPM1-230ENST00000561266 DHDHQ9UQ10 334 aa11.47□□□□□ -0.57
TPM1-230ENST00000561266 MAGEA13PA6NCF6 341 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 PIN1P1O15428 100 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 NDUFB3O43676 98 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 ENSAO43768 121 aaKnown RBP11.46□□□□□ -0.57
TPM1-230ENST00000561266 VENTXO95231 258 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 RPSAP08865 295 aaKnown RBP11.46□□□□□ -0.57
TPM1-230ENST00000561266 PRKACBP22694 351 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 CRHBPP24387 322 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 DUSP1P28562 367 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 PRDX2P32119 198 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 VHLP40337 213 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 WNT4P56705 351 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 ZP1P60852 638 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 ARF6P62330 175 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 IL13RA1P78552 427 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 PDZK1IP1Q13113 114 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 INSL4Q14641 139 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 SERPINA12Q8IW75 414 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 Q8N7P7 452 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 NANPQ8TBE9 248 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms