RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 TSPAN15O95858 294 aa13.19□□□□□ -0.3
SNX1-213ENST00000561026 TK1P04183 234 aa13.19□□□□□ -0.3
SNX1-213ENST00000561026 CCL1P22362 96 aa13.19□□□□□ -0.3
SNX1-213ENST00000561026 ERVK11-1P61568 191 aa13.19□□□□□ -0.3
SNX1-213ENST00000561026 LRRC75BQ2VPJ9 315 aa13.19□□□□□ -0.3
SNX1-213ENST00000561026 SSX6Q7RTT6 188 aa13.19□□□□□ -0.3
SNX1-213ENST00000561026 ANGPTL5Q86XS5 388 aa13.19□□□□□ -0.3
SNX1-213ENST00000561026 GID4Q8IVV7 300 aa13.19□□□□□ -0.3
SNX1-213ENST00000561026 OR2T27Q8NH04 317 aa13.19□□□□□ -0.3
SNX1-213ENST00000561026 USE1Q9NZ43 259 aa13.19□□□□□ -0.3
SNX1-213ENST00000561026 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.19□□□□□ -0.3
SNX1-213ENST00000561026 DYNC1I1O14576 645 aa13.18□□□□□ -0.3
SNX1-213ENST00000561026 RPP14O95059 124 aaKnown RBP13.18□□□□□ -0.3
SNX1-213ENST00000561026 KRT8P05787 483 aa13.18□□□□□ -0.3
SNX1-213ENST00000561026 CCL3L1P16619 93 aa13.18□□□□□ -0.3
SNX1-213ENST00000561026 FASP25445 335 aa13.18□□□□□ -0.3
SNX1-213ENST00000561026 ERVFRD-1P60508 538 aa13.18□□□□□ -0.3
SNX1-213ENST00000561026 BNIP1Q12981 228 aa13.18□□□□□ -0.3
SNX1-213ENST00000561026 IL24Q13007 206 aa13.18□□□□□ -0.3
SNX1-213ENST00000561026 LY6EQ16553 131 aa13.18□□□□□ -0.3
SNX1-213ENST00000561026 CRIP3Q6Q6R5 217 aa13.18□□□□□ -0.3
SNX1-213ENST00000561026 CALHM1Q8IU99 346 aa13.18□□□□□ -0.3
SNX1-213ENST00000561026 BATF2Q8N1L9 274 aa13.18□□□□□ -0.3
SNX1-213ENST00000561026 TBX5Q99593 518 aa13.18□□□□□ -0.3
SNX1-213ENST00000561026 PKIBQ9C010 78 aa13.18□□□□□ -0.3
SNX1-213ENST00000561026 GABARAPL1Q9H0R8 117 aa13.18□□□□□ -0.3
SNX1-213ENST00000561026 OR14J1Q9UGF5 321 aa13.18□□□□□ -0.3
SNX1-213ENST00000561026 WARS2Q9UGM6 360 aaKnown RBP13.18□□□□□ -0.3
SNX1-213ENST00000561026 ENOPH1Q9UHY7 261 aa13.18□□□□□ -0.3
SNX1-213ENST00000561026 A0A1W2PQL4 384 aaPredicted RBP13.17□□□□□ -0.3
SNX1-213ENST00000561026 OR2T7P0C7T2 308 aa13.17□□□□□ -0.3
SNX1-213ENST00000561026 PAX6P26367 422 aa13.17□□□□□ -0.3
SNX1-213ENST00000561026 KIR2DS4P43632 304 aa13.17□□□□□ -0.3
SNX1-213ENST00000561026 ZNF273Q14593 569 aa13.17□□□□□ -0.3
SNX1-213ENST00000561026 C2orf68Q2NKX9 166 aa13.17□□□□□ -0.3
SNX1-213ENST00000561026 YIPF7Q8N8F6 280 aa13.17□□□□□ -0.3
SNX1-213ENST00000561026 TRMT10AQ8TBZ6 339 aaKnown RBP13.17□□□□□ -0.3
SNX1-213ENST00000561026 FAM53CQ9NYF3 392 aa13.17□□□□□ -0.3
SNX1-213ENST00000561026 SIGLEC9Q9Y336 463 aa13.17□□□□□ -0.3
SNX1-213ENST00000561026 AP4S1Q9Y587 144 aa13.17□□□□□ -0.3
SNX1-213ENST00000561026 FAM230AA0A1W2PPH8 454 aa13.16□□□□□ -0.3
SNX1-213ENST00000561026 K7N7A8 449 aa13.16□□□□□ -0.3
SNX1-213ENST00000561026 COX7A1P24310 79 aa13.16□□□□□ -0.3
SNX1-213ENST00000561026 HTR1FP30939 366 aa13.16□□□□□ -0.3
SNX1-213ENST00000561026 POLR2IP36954 125 aaKnown RBP13.16□□□□□ -0.3
SNX1-213ENST00000561026 BMXP51813 675 aa13.16□□□□□ -0.3
SNX1-213ENST00000561026 EFNB2P52799 333 aa13.16□□□□□ -0.3
SNX1-213ENST00000561026 LGALS4P56470 323 aa13.16□□□□□ -0.3
SNX1-213ENST00000561026 UBE2V2Q15819 145 aa13.16□□□□□ -0.3
SNX1-213ENST00000561026 ODF4Q2M2E3 257 aa13.16□□□□□ -0.3
SNX1-213ENST00000561026 C11orf88Q6PI97 169 aa13.16□□□□□ -0.3
SNX1-213ENST00000561026 AMIGO2Q86SJ2 522 aa13.16□□□□□ -0.3
SNX1-213ENST00000561026 CATSPERDQ86XM0 798 aa13.16□□□□□ -0.3
SNX1-213ENST00000561026 OR4C13Q8NGP0 309 aa13.16□□□□□ -0.3
SNX1-213ENST00000561026 FAM110DQ8TAY7 271 aaPredicted RBP13.16□□□□□ -0.3
SNX1-213ENST00000561026 PIFOQ8TCI5 191 aa13.16□□□□□ -0.3
SNX1-213ENST00000561026 CIB1Q99828 191 aa13.16□□□□□ -0.3
SNX1-213ENST00000561026 RAB18Q9NP72 206 aa13.16□□□□□ -0.3
SNX1-213ENST00000561026 MTCH1Q9NZJ7 389 aa13.16□□□□□ -0.3
SNX1-213ENST00000561026 SLC7A11Q9UPY5 501 aa13.16□□□□□ -0.3
SNX1-213ENST00000561026 METTL15A6NJ78 407 aa13.15□□□□□ -0.3
SNX1-213ENST00000561026 FAM90A8PA6NJQ4 464 aa13.15□□□□□ -0.3
SNX1-213ENST00000561026 C17orf98A8MV24 154 aa13.15□□□□□ -0.3
SNX1-213ENST00000561026 SYT7O43581 403 aa13.15□□□□□ -0.3
SNX1-213ENST00000561026 SULT1C4O75897 302 aa13.15□□□□□ -0.3
SNX1-213ENST00000561026 CSF1P09603 554 aa13.15□□□□□ -0.3
SNX1-213ENST00000561026 PIPP12273 146 aaPredicted RBP13.15□□□□□ -0.3
SNX1-213ENST00000561026 DLX6P56179 175 aa13.15□□□□□ -0.3
SNX1-213ENST00000561026 COL10A1Q03692 680 aa13.15□□□□□ -0.3
SNX1-213ENST00000561026 HERPUD1Q15011 391 aa13.15□□□□□ -0.3
SNX1-213ENST00000561026 ZNF782Q6ZMW2 699 aaPredicted RBP13.15□□□□□ -0.3
SNX1-213ENST00000561026 Q6ZTK2 550 aa13.15□□□□□ -0.3
SNX1-213ENST00000561026 RANBP3Q9H6Z4 567 aaPredicted RBP13.15□□□□□ -0.3
SNX1-213ENST00000561026 PLEKHA1Q9HB21 404 aa13.15□□□□□ -0.3
SNX1-213ENST00000561026 IGKV1-27A0A075B6S5 117 aa13.14□□□□□ -0.31
SNX1-213ENST00000561026 MEGF11A6BM72 1044 aa13.14□□□□□ -0.31
SNX1-213ENST00000561026 VGLL3A8MV65 326 aa13.14□□□□□ -0.31
SNX1-213ENST00000561026 F8VVB4 439 aa13.14□□□□□ -0.31
SNX1-213ENST00000561026 F8VWA3 439 aa13.14□□□□□ -0.31
SNX1-213ENST00000561026 H3BSH0 61 aa13.14□□□□□ -0.31
SNX1-213ENST00000561026 ZNF737O75373 536 aa13.14□□□□□ -0.31
SNX1-213ENST00000561026 APOL3O95236 402 aa13.14□□□□□ -0.31
SNX1-213ENST00000561026 CHRM2P08172 466 aa13.14□□□□□ -0.31
SNX1-213ENST00000561026 FCGR1AP12314 374 aa13.14□□□□□ -0.31
SNX1-213ENST00000561026 RASSF2P50749 326 aa13.14□□□□□ -0.31
SNX1-213ENST00000561026 C1orf146Q5VVC0 180 aa13.14□□□□□ -0.31
SNX1-213ENST00000561026 LIAT1Q6ZQX7 453 aa13.14□□□□□ -0.31
SNX1-213ENST00000561026 LHFPL4Q7Z7J7 247 aa13.14□□□□□ -0.31
SNX1-213ENST00000561026 ASCC1Q8N9N2 400 aaKnown RBP13.14□□□□□ -0.31
SNX1-213ENST00000561026 CCDC54Q8NEL0 328 aa13.14□□□□□ -0.31
SNX1-213ENST00000561026 OR10H4Q8NGA5 316 aa13.14□□□□□ -0.31
SNX1-213ENST00000561026 OR8J1Q8NGP2 316 aa13.14□□□□□ -0.31
SNX1-213ENST00000561026 OR2T6Q8NHC8 308 aa13.14□□□□□ -0.31
SNX1-213ENST00000561026 CEP19Q96LK0 163 aa13.14□□□□□ -0.31
SNX1-213ENST00000561026 ADI1Q9BV57 179 aa13.14□□□□□ -0.31
SNX1-213ENST00000561026 NPFFR1Q9GZQ6 430 aa13.14□□□□□ -0.31
SNX1-213ENST00000561026 CHST5Q9GZS9 411 aa13.14□□□□□ -0.31
SNX1-213ENST00000561026 CHST1O43916 411 aa13.13□□□□□ -0.31
SNX1-213ENST00000561026 GATBO75879 557 aaKnown RBP13.13□□□□□ -0.31
SNX1-213ENST00000561026 RBP4P02753 201 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms