RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 FAM166AQ6J272 317 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 WDR82Q6UXN9 313 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 DCDC5Q6ZRR9 648 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 TPRA1Q86W33 373 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 SERPINA12Q8IW75 414 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 PARP16Q8N5Y8 322 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 MAPK1IP1LQ8NDC0 245 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 OR5D14Q8NGL3 314 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 OR13C3Q8NGS6 347 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 RGP1Q92546 391 aaPredicted RBP11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 PHYHIPQ92561 330 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 PDCD1LG2Q9BQ51 273 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 DNTTIP1Q9H147 329 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 OR51I2Q9H344 312 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 PATZ1Q9HBE1 687 aaKnown RBP11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 YLPM1P49750 1951 aaKnown RBP11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 TRAV1-2A0A0B4J238 106 aa11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 PPIAL4CA0A0B4J2A2 164 aa11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 A0A0G2JK05 382 aa11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 PQLC2LA1A4F0 135 aa11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 SMIM30A4D0T7 59 aa11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 OOEPA6NGQ2 149 aa11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 SRRM5B3KS81 715 aa11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 CDIPTO14735 213 aa11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 FOXH1O75593 365 aa11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 CYB5R3P00387 301 aaPredicted RBP11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 MPZP25189 248 aa11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 CALRP27797 417 aaKnown RBP11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 NPY4RP50391 375 aa11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 DVL1P1P54792 670 aaPredicted RBP11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 KRTAP1-1Q07627 177 aa11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 MICBQ29980 383 aa11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 WDR86Q86TI4 376 aa11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 C11orf53Q8IXP5 236 aa11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 RDH10Q8IZV5 341 aa11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 GCSAMQ8N6F7 178 aa11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 TEX29Q8N6K0 151 aa11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 SCCPDHQ8NBX0 429 aa11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 OR51F2Q8NH61 342 aa11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 PKIBQ9C010 78 aa11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 TMEM165Q9HC07 324 aa11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 RASL12Q9NYN1 266 aa11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 KCNS2Q9ULS6 477 aa11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 DHDHQ9UQ10 334 aa11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 ZNF281Q9Y2X9 895 aa11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 POLR3KQ9Y2Y1 108 aaPredicted RBP11.73□□□□□ -0.53
PKNOX1-209ENST00000560448 ACANP16112 2415 aa11.72□□□□□ -0.53
PKNOX1-209ENST00000560448 TRAV20A0A0B4J274 112 aa11.72□□□□□ -0.53
PKNOX1-209ENST00000560448 J3QT63 122 aa11.72□□□□□ -0.53
PKNOX1-209ENST00000560448 NOS1APO75052 506 aaPredicted RBP11.72□□□□□ -0.53
PKNOX1-209ENST00000560448 MSMBP08118 114 aa11.72□□□□□ -0.53
PKNOX1-209ENST00000560448 Q6ZNX1 250 aa11.72□□□□□ -0.53
PKNOX1-209ENST00000560448 LHFPL2Q6ZUX7 228 aa11.72□□□□□ -0.53
PKNOX1-209ENST00000560448 GLCCI1Q86VQ1 547 aa11.72□□□□□ -0.53
PKNOX1-209ENST00000560448 FAM90A1Q86YD7 464 aa11.72□□□□□ -0.53
PKNOX1-209ENST00000560448 LAX1Q8IWV1 398 aa11.72□□□□□ -0.53
PKNOX1-209ENST00000560448 LRRC29Q8WV35 223 aa11.72□□□□□ -0.53
PKNOX1-209ENST00000560448 TSEN15Q8WW01 171 aaKnown RBP11.72□□□□□ -0.53
PKNOX1-209ENST00000560448 AQP3Q92482 292 aa11.72□□□□□ -0.53
PKNOX1-209ENST00000560448 AP3S1Q92572 193 aa11.72□□□□□ -0.53
PKNOX1-209ENST00000560448 MSI2Q96DH6 328 aaKnown RBP11.72□□□□□ -0.53
PKNOX1-209ENST00000560448 BORCS8Q96FH0 119 aa11.72□□□□□ -0.53
PKNOX1-209ENST00000560448 SDHCQ99643 169 aaPredicted RBP11.72□□□□□ -0.53
PKNOX1-209ENST00000560448 ZCCHC4Q9H5U6 513 aa11.72□□□□□ -0.53
PKNOX1-209ENST00000560448 GPR173Q9NS66 373 aa11.72□□□□□ -0.53
PKNOX1-209ENST00000560448 DCAF16Q9NXF7 216 aa11.72□□□□□ -0.53
PKNOX1-209ENST00000560448 KAAG1Q9UBP8 84 aa11.72□□□□□ -0.53
PKNOX1-209ENST00000560448 ABCA1O95477 2261 aa11.72□□□□□ -0.53
PKNOX1-209ENST00000560448 IGHV3-64DA0A0J9YX35 117 aa11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 TRBV5-5A0A0J9YX44 114 aa11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 CEACAM18A8MTB9 384 aa11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 A8MV72 311 aaPredicted RBP11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 A8MXK9 166 aa11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 F5H0A9 414 aaPredicted RBP11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 PIN1P1O15428 100 aa11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 OCM2P0CE71 109 aa11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 OCMP0CE72 109 aaPredicted RBP11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 RPS2P15880 293 aaKnown RBP11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 MYL9P24844 172 aa11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 MAPK3P27361 379 aaPredicted RBP11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 HAAOP46952 286 aa11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 RBP2P50120 134 aa11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 ATP1B3P54709 279 aa11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 IL24Q13007 206 aa11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 UBE2V2Q15819 145 aa11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 ESCO2Q56NI9 601 aa11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 SPANXN2Q5MJ10 180 aa11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 HAGHLQ6PII5 290 aaPredicted RBP11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 SNX29P2Q8IUI4 249 aa11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 Q8IYB0 196 aa11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 OR8B3Q8NGG8 313 aa11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 CHPT1Q8WUD6 406 aa11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 FGGYQ96C11 551 aa11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 ADAT3Q96EY9 351 aaPredicted RBP11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 NEIL1Q96FI4 390 aaPredicted RBP11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 OR14A2Q96R54 314 aa11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 OR8B2Q96RD0 313 aa11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 TMEM246Q9BRR3 403 aa11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 NARFLQ9H6Q4 476 aa11.71□□□□□ -0.53
PKNOX1-209ENST00000560448 RHOFQ9HBH0 211 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms