RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 RGS21Q2M5E4 152 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 CDONQ4KMG0 1287 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 WDR38Q5JTN6 314 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 LINC01590Q5TEZ4 76 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 METTL11BQ5VVY1 283 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 SLX4IPQ5VYV7 408 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 HCP5Q6MZN7 132 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 METAP1DQ6UB28 335 aaPredicted RBP4.74□□□□□ -1.65
USP3-215ENST00000559771 DRAM2Q6UX65 266 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 WDR82Q6UXN9 313 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 SLC16A9Q7RTY1 509 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 DCXRQ7Z4W1 244 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 STX19Q8N4C7 294 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 PNLDC1Q8NA58 520 aaKnown RBP4.74□□□□□ -1.65
USP3-215ENST00000559771 AQP11Q8NBQ7 271 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 SLC37A3Q8NCC5 494 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 OR9Q1Q8NGQ5 310 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 OR2AJ1Q8NGZ0 328 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 OR4Q3Q8NH05 313 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 PPP1R35Q8TAP8 253 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 DYNC2LI1Q8TCX1 351 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 C17orf50Q8WW18 174 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 SGK3Q96BR1 496 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 LGALS12Q96DT0 336 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 AMELYQ99218 206 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 CCL13Q99616 98 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 SLC22A4Q9H015 551 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 TLNRD1Q9H1K6 362 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 WDR13Q9H1Z4 485 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 CNTD2Q9H8S5 307 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 KRCC1Q9NPI7 259 aaPredicted RBP4.74□□□□□ -1.65
USP3-215ENST00000559771 MRPS18AQ9NVS2 196 aaKnown RBP4.74□□□□□ -1.65
USP3-215ENST00000559771 IL20Q9NYY1 176 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 CCDC59Q9P031 241 aaKnown RBP4.74□□□□□ -1.65
USP3-215ENST00000559771 ZNRD1Q9P1U0 126 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 KCNG2Q9UJ96 466 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 ERGIC3Q9Y282 383 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 RPL36Q9Y3U8 105 aaKnown RBP4.74□□□□□ -1.65
USP3-215ENST00000559771 KPTNQ9Y664 436 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 ZNF816-ZNF321PA0A0X1KG74 233 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 hCG_38984A0A1B0GV85 526 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 GGT3PA6NGU5 568 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 ZNF593O00488 134 aaPredicted RBP4.73□□□□□ -1.65
USP3-215ENST00000559771 TIMM23O14925 209 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 AIREO43918 545 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 SULT1C4O75897 302 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 ECDO95905 644 aaPredicted RBP4.73□□□□□ -1.65
USP3-215ENST00000559771 GASTP01350 101 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 HLA-DQA2P01906 255 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 MT-ND2P03891 347 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 GYPBP06028 91 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 MUC1P15941 1255 aaPredicted RBP4.73□□□□□ -1.65
USP3-215ENST00000559771 ZNF823P16415 610 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 ACKR3P25106 362 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 EPHA2P29317 976 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 SOX6P35712 828 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 ZNF45Q02386 682 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 ST3GAL4Q11206 333 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 PPP1R8Q12972 351 aaKnown RBP4.73□□□□□ -1.65
USP3-215ENST00000559771 CRMP1Q14194 572 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 KCNJ8Q15842 424 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 TIGD6Q17RP2 521 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 BEAN1Q3B7T3 259 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 KLHL22Q53GT1 634 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 TEX30Q5JUR7 227 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 ATPAF1Q5TC12 328 aaPredicted RBP4.73□□□□□ -1.65
USP3-215ENST00000559771 C12orf73Q69YU5 71 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 STUMQ69YW2 141 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 SLC35E4Q6ICL7 350 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 CRIP3Q6Q6R5 217 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 AHSA2Q719I0 299 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 LNX2Q8N448 690 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 PROKR2Q8NFJ6 384 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 OR1M1Q8NGA1 313 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 OR9Q2Q8NGE9 314 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 OR5T2Q8NGG2 359 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 OR6Q1Q8NGQ2 317 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 C8orf46Q8TAG6 207 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 GNPDA2Q8TDQ7 276 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 LRRC29Q8WV35 223 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 ST8SIA4Q92187 359 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 GGHQ92820 318 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 SPTSSAQ969W0 71 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 SLAMF6Q96DU3 332 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 GAFA1Q96PS6 74 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 KCNJ15Q99712 375 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 NIPSNAP1Q9BPW8 284 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 DCTN5Q9BTE1 182 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 WNT10AQ9GZT5 417 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 NXF2Q9GZY0 626 aaKnown RBP4.73□□□□□ -1.65
USP3-215ENST00000559771 NAA50Q9GZZ1 169 aaKnown RBP4.73□□□□□ -1.65
USP3-215ENST00000559771 SLC25A19Q9HC21 320 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 ISYNA1Q9NPH2 558 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 AKIP1Q9NQ31 210 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 SIRT7Q9NRC8 400 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 VPREB3Q9UKI3 123 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 SIGLEC9Q9Y336 463 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 CDH10Q9Y6N8 788 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 COL7A1Q02388 2944 aa4.73□□□□□ -1.65
USP3-215ENST00000559771 KMT2CQ8NEZ4 4911 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms