RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 NDUFB7P17568 137 aa9□□□□□ -0.97
SPG11-216ENST00000559347 PEX2P28328 305 aa9□□□□□ -0.97
SPG11-216ENST00000559347 CEBPDP49716 269 aaPredicted RBP9□□□□□ -0.97
SPG11-216ENST00000559347 CCR9P51686 369 aa9□□□□□ -0.97
SPG11-216ENST00000559347 RCN1Q15293 331 aa9□□□□□ -0.97
SPG11-216ENST00000559347 CNN3Q15417 329 aaKnown RBP9□□□□□ -0.97
SPG11-216ENST00000559347 METAP1DQ6UB28 335 aaPredicted RBP9□□□□□ -0.97
SPG11-216ENST00000559347 LHFPL3Q86UP9 236 aa9□□□□□ -0.97
SPG11-216ENST00000559347 ANGPTL5Q86XS5 388 aa9□□□□□ -0.97
SPG11-216ENST00000559347 CMTM4Q8IZR5 234 aa9□□□□□ -0.97
SPG11-216ENST00000559347 SYS1Q8N2H4 156 aa9□□□□□ -0.97
SPG11-216ENST00000559347 CD177Q8N6Q3 437 aa9□□□□□ -0.97
SPG11-216ENST00000559347 Q8N7P7 452 aa9□□□□□ -0.97
SPG11-216ENST00000559347 OR51A4Q8NGJ6 313 aa9□□□□□ -0.97
SPG11-216ENST00000559347 OR10AC1Q8NH08 325 aa9□□□□□ -0.97
SPG11-216ENST00000559347 GCDHQ92947 438 aaPredicted RBP9□□□□□ -0.97
SPG11-216ENST00000559347 SLC25A28Q96A46 364 aa9□□□□□ -0.97
SPG11-216ENST00000559347 ADAT3Q96EY9 351 aaPredicted RBP9□□□□□ -0.97
SPG11-216ENST00000559347 BORCS8Q96FH0 119 aa9□□□□□ -0.97
SPG11-216ENST00000559347 MRPL48Q96GC5 212 aaKnown RBP9□□□□□ -0.97
SPG11-216ENST00000559347 ZNF649Q9BS31 505 aa9□□□□□ -0.97
SPG11-216ENST00000559347 ISG20L2Q9H9L3 353 aaKnown RBP9□□□□□ -0.97
SPG11-216ENST00000559347 SIRT7Q9NRC8 400 aa9□□□□□ -0.97
SPG11-216ENST00000559347 INPP5EQ9NRR6 644 aa9□□□□□ -0.97
SPG11-216ENST00000559347 ERVK13-1Q9NX77 482 aa9□□□□□ -0.97
SPG11-216ENST00000559347 TRBV23-1A0A0A0MS06 115 aa8.99□□□□□ -0.97
SPG11-216ENST00000559347 IGKV1-9A0A0C4DH69 117 aa8.99□□□□□ -0.97
SPG11-216ENST00000559347 A0A1W2PQ09 198 aa8.99□□□□□ -0.97
SPG11-216ENST00000559347 OR4C45A6NMZ5 311 aa8.99□□□□□ -0.97
SPG11-216ENST00000559347 M0R1W7 72 aa8.99□□□□□ -0.97
SPG11-216ENST00000559347 SLC1A7O00341 560 aa8.99□□□□□ -0.97
SPG11-216ENST00000559347 FADS2O95864 444 aaKnown RBP8.99□□□□□ -0.97
SPG11-216ENST00000559347 HKR1P10072 659 aa8.99□□□□□ -0.97
SPG11-216ENST00000559347 ZNF20P17024 532 aa8.99□□□□□ -0.97
SPG11-216ENST00000559347 CFPP27918 469 aa8.99□□□□□ -0.97
SPG11-216ENST00000559347 FUT6P51993 359 aa8.99□□□□□ -0.97
SPG11-216ENST00000559347 DLX1P56177 255 aa8.99□□□□□ -0.97
SPG11-216ENST00000559347 KLRD1Q13241 179 aa8.99□□□□□ -0.97
SPG11-216ENST00000559347 ALKBH1Q13686 389 aaKnown RBP8.99□□□□□ -0.97
SPG11-216ENST00000559347 SMN1Q16637 294 aaKnown RBP8.99□□□□□ -0.97
SPG11-216ENST00000559347 LRRC36Q1X8D7 754 aa8.99□□□□□ -0.97
SPG11-216ENST00000559347 AWAT1Q58HT5 328 aa8.99□□□□□ -0.97
SPG11-216ENST00000559347 ZNF691Q5VV52 312 aa8.99□□□□□ -0.97
SPG11-216ENST00000559347 LPCAT4Q643R3 524 aa8.99□□□□□ -0.97
SPG11-216ENST00000559347 Q6YL49 198 aa8.99□□□□□ -0.97
SPG11-216ENST00000559347 UTS2BQ765I0 119 aa8.99□□□□□ -0.97
SPG11-216ENST00000559347 PDZD9Q8IXQ8 264 aa8.99□□□□□ -0.97
SPG11-216ENST00000559347 ZNF561Q8N587 486 aa8.99□□□□□ -0.97
SPG11-216ENST00000559347 ZNF555Q8NEP9 628 aa8.99□□□□□ -0.97
SPG11-216ENST00000559347 OR52I1Q8NGK6 324 aa8.99□□□□□ -0.97
SPG11-216ENST00000559347 JAM3Q9BX67 310 aa8.99□□□□□ -0.97
SPG11-216ENST00000559347 MRPS18AQ9NVS2 196 aaKnown RBP8.99□□□□□ -0.97
SPG11-216ENST00000559347 MTCH1Q9NZJ7 389 aa8.99□□□□□ -0.97
SPG11-216ENST00000559347 OR14J1Q9UGF5 321 aa8.99□□□□□ -0.97
SPG11-216ENST00000559347 HHLA2Q9UM44 414 aa8.99□□□□□ -0.97
SPG11-216ENST00000559347 RPL36Q9Y3U8 105 aaKnown RBP8.99□□□□□ -0.97
SPG11-216ENST00000559347 A0A0U1RQK1 487 aa8.98□□□□□ -0.97
SPG11-216ENST00000559347 F8VVB4 439 aa8.98□□□□□ -0.97
SPG11-216ENST00000559347 F8VWA3 439 aa8.98□□□□□ -0.97
SPG11-216ENST00000559347 RNASEK-C17orf49H0YIS7 233 aa8.98□□□□□ -0.97
SPG11-216ENST00000559347 CLIC3O95833 236 aa8.98□□□□□ -0.97
SPG11-216ENST00000559347 SERPINA3P01011 423 aa8.98□□□□□ -0.97
SPG11-216ENST00000559347 KNG1P01042 644 aa8.98□□□□□ -0.97
SPG11-216ENST00000559347 MELTFP08582 738 aa8.98□□□□□ -0.97
SPG11-216ENST00000559347 AZGP1P25311 298 aaKnown RBP8.98□□□□□ -0.97
SPG11-216ENST00000559347 PRDX2P32119 198 aa8.98□□□□□ -0.97
SPG11-216ENST00000559347 RBP2P50120 134 aa8.98□□□□□ -0.97
SPG11-216ENST00000559347 CAPZA1P52907 286 aa8.98□□□□□ -0.97
SPG11-216ENST00000559347 PRB3Q04118 309 aaPredicted RBP8.98□□□□□ -0.97
SPG11-216ENST00000559347 KLHL22Q53GT1 634 aa8.98□□□□□ -0.97
SPG11-216ENST00000559347 SLC25A26Q70HW3 274 aa8.98□□□□□ -0.97
SPG11-216ENST00000559347 EGFL6Q8IUX8 553 aa8.98□□□□□ -0.97
SPG11-216ENST00000559347 PACRGLQ8N7B6 248 aa8.98□□□□□ -0.97
SPG11-216ENST00000559347 DNAAF1Q8NEP3 725 aa8.98□□□□□ -0.97
SPG11-216ENST00000559347 OR13C3Q8NGS6 347 aa8.98□□□□□ -0.97
SPG11-216ENST00000559347 CNIH3Q8TBE1 160 aa8.98□□□□□ -0.97
SPG11-216ENST00000559347 TNFRSF14Q92956 283 aa8.98□□□□□ -0.97
SPG11-216ENST00000559347 SLAMF9Q96A28 289 aa8.98□□□□□ -0.97
SPG11-216ENST00000559347 CEP19Q96LK0 163 aa8.98□□□□□ -0.97
SPG11-216ENST00000559347 MYCBPQ99417 103 aaPredicted RBP8.98□□□□□ -0.97
SPG11-216ENST00000559347 UNKLQ9H9P5 680 aaKnown RBP8.98□□□□□ -0.97
SPG11-216ENST00000559347 NOX4Q9NPH5 578 aa8.98□□□□□ -0.97
SPG11-216ENST00000559347 C8orf4Q9NR00 106 aa8.98□□□□□ -0.97
SPG11-216ENST00000559347 C19orf12Q9NSK7 152 aa8.98□□□□□ -0.97
SPG11-216ENST00000559347 PKD1L1Q8TDX9 2849 aa8.98□□□□□ -0.97
SPG11-216ENST00000559347 TMEM212A6NML5 194 aa8.97□□□□□ -0.97
SPG11-216ENST00000559347 E9PI62 339 aa8.97□□□□□ -0.97
SPG11-216ENST00000559347 ZFPL1O95159 310 aa8.97□□□□□ -0.97
SPG11-216ENST00000559347 LIMS3P0CW19 117 aa8.97□□□□□ -0.97
SPG11-216ENST00000559347 LIMS4P0CW20 117 aa8.97□□□□□ -0.97
SPG11-216ENST00000559347 ATF1P18846 271 aa8.97□□□□□ -0.97
SPG11-216ENST00000559347 POU3F4P49335 361 aa8.97□□□□□ -0.97
SPG11-216ENST00000559347 ATP1B3P54709 279 aa8.97□□□□□ -0.97
SPG11-216ENST00000559347 GUCA2AQ02747 115 aa8.97□□□□□ -0.97
SPG11-216ENST00000559347 MRPL28Q13084 256 aaKnown RBP8.97□□□□□ -0.97
SPG11-216ENST00000559347 C1orf122Q6ZSJ8 110 aa8.97□□□□□ -0.97
SPG11-216ENST00000559347 LHFPL2Q6ZUX7 228 aa8.97□□□□□ -0.97
SPG11-216ENST00000559347 LDLRAD3Q86YD5 345 aa8.97□□□□□ -0.97
SPG11-216ENST00000559347 Q8IYB0 196 aa8.97□□□□□ -0.97
SPG11-216ENST00000559347 FAM185AQ8N0U4 392 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms