RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 MRPL49Q13405 166 aaKnown RBP6.33□□□□□ -1.4
USP3-210ENST00000559192 TSPO2Q5TGU0 170 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 LYRM7Q5U5X0 104 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 SLC36A1Q7Z2H8 476 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 ARRDC1Q8N5I2 433 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 OR51H1Q8NH63 302 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 RPS4Y2Q8TD47 263 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 MCHR2Q969V1 340 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 VSTM2LQ96N03 204 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 PARD6GQ9BYG4 376 aaPredicted RBP6.33□□□□□ -1.4
USP3-210ENST00000559192 ICAM5Q9UMF0 924 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 OTOFQ9HC10 1997 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 CKAP5Q14008 2032 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 FBLL1A6NHQ2 334 aaKnown RBP6.33□□□□□ -1.4
USP3-210ENST00000559192 MPTX1A8MV57 137 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 UPK3AO75631 287 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 CST7O76096 145 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 HAAOP46952 286 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 PRSS12P56730 875 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 SLC37A1P57057 533 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 COL5A1-AS1Q5SY13 56 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 THEM4Q5T1C6 240 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 DHRS13Q6UX07 377 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 SFTPA2Q8IWL1 248 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 LINC00469Q8N7U9 141 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 NOL4LQ96MY1 436 aaPredicted RBP6.33□□□□□ -1.4
USP3-210ENST00000559192 TP53RKQ96S44 253 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 NRIP2Q9BQI9 281 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 VN1R1Q9GZP7 353 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 UBTD1Q9HAC8 227 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 CCDC88CQ9P219 2028 aa6.33□□□□□ -1.4
USP3-210ENST00000559192 TRBV5-5A0A0J9YX44 114 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 TLCD2A6NGC4 264 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 RER1O15258 196 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 MOSPD3O75425 235 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 YIF1AO95070 293 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 PLGLAQ15195 96 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 TGIF1Q15583 401 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 OR2B11Q5JQS5 317 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 OR8G2PQ6IF36 304 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 C16orf47Q6ZP98 133 aaPredicted RBP6.32□□□□□ -1.4
USP3-210ENST00000559192 LRP11Q86VZ4 500 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 THNSL2Q86YJ6 484 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 GSX1Q9H4S2 264 aaPredicted RBP6.32□□□□□ -1.4
USP3-210ENST00000559192 TMEM9BQ9NQ34 198 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 PCM1Q15154 2024 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 PLPP3O14495 311 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 TNFRSF10CO14798 259 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 IAPPP10997 89 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 SULT1A1P50225 295 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 PNLIPRP3Q17RR3 467 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 PABPC1L2AQ5JQF8 200 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 GNPNAT1Q96EK6 184 aaPredicted RBP6.32□□□□□ -1.4
USP3-210ENST00000559192 ADGRG7Q96K78 797 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 SIRT7Q9NRC8 400 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 SLC22A20A6NK97 555 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 TRAPPC2LH3BP13 241 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 H3BP45 60 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 CD1AP06126 327 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 PPP1CBP62140 327 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 RPS11P62280 158 aaKnown RBP eCLIP6.32□□□□□ -1.4
USP3-210ENST00000559192 MAJINQ3KP22 176 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 ZNF787Q6DD87 383 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 OR4A47Q6IF82 309 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 UNQ9370/PRO34162Q6UXP9 181 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 SLC16A14Q7RTX9 510 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 GJC3Q8NFK1 279 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 FGF14Q92915 247 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 MRGPRX1Q96LB2 322 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 GPR87Q9BY21 358 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 SLC35B3Q9H1N7 401 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 NPTNQ9Y639 398 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 PIKFYVEQ9Y2I7 2098 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 CCDC187A0A096LP49 1063 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 A0A1B0GTQ1 180 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 VSTM5A8MXK1 200 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 ZNF814B7Z6K7 855 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 OR5AC1P0C628 307 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 PPOXP50336 477 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 TIGITQ495A1 244 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 LHX4Q969G2 390 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 HS3ST1O14792 307 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 P04436 131 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 VSIG8P0DPA2 414 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 CD38P28907 300 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 RRADP55042 308 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 RPS4XP62701 263 aaKnown RBP6.32□□□□□ -1.4
USP3-210ENST00000559192 SRSF3P84103 164 aaKnown RBP6.32□□□□□ -1.4
USP3-210ENST00000559192 EFNB1P98172 346 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 SKP2Q13309 424 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 ZNF600Q6ZNG1 722 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 Q7L0L9 218 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 MTURNQ8N3F0 131 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 NOXO1Q8NFA2 376 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 FAM210BQ96KR6 192 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 RBM14Q96PK6 669 aaKnown RBP6.32□□□□□ -1.4
USP3-210ENST00000559192 FAAP24Q9BTP7 215 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 TBX21Q9UL17 535 aa6.32□□□□□ -1.4
USP3-210ENST00000559192 TRAV14DV4A0A0A6YYC5 116 aa6.31□□□□□ -1.4
USP3-210ENST00000559192 A0A1W2PPC1 479 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms