RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 H2BFSP57053 126 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 PPA1Q15181 289 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 C2orf68Q2NKX9 166 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 GLIPR1L1Q6UWM5 242 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 TRAPPC6BQ86SZ2 158 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 CCDC36Q8IYA8 594 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 OR13C8Q8NGS7 320 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 PGAM5Q96HS1 289 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 SLC6A7Q99884 636 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 LPAR5Q9H1C0 372 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 OPN4Q9UHM6 478 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 V9GYS6 101 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 FASNP49327 2511 aaKnown RBP13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 IGKV1-9A0A0C4DH69 117 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 RGS11O94810 467 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 IGKV3-15P01624 115 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 PRF1P14222 555 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 IGFBP2P18065 325 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 SSTR2P30874 369 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 ARR3P36575 388 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 PCBD1P61457 104 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 SORDQ00796 357 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 ZMYND11Q15326 602 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 NAA40Q86UY6 237 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 CHST4Q8NCG5 386 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 KCNG3Q8TAE7 436 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 ASB13Q8WXK3 278 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 MUCL1Q96DR8 90 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 WDR89Q96FK6 387 aaPredicted RBP13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 SPACA5Q96QH8 159 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 PLEK2Q9NYT0 353 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 AMDHD2Q9Y303 409 aa13.63□□□□□ -0.23
CDC42BPB-204ENST00000559043 ANKHD1Q8IWZ3 2542 aaKnown RBP13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 A0A0A6YYD4 124 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 OR6C6A6NF89 314 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 DISC1C4P0D8 188 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 SLC22A5O76082 557 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 IGLV1-44P01699 117 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 APOC1P02654 83 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 OR4E1P0C645 316 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 UBBP0CG47 229 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 THBS4P35443 961 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 OR3A4PP47883 348 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 ZNF83P51522 516 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 IDH3GP51553 393 aaPredicted RBP13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 HGFACQ04756 655 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 RIPPLY1Q0D2K3 151 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 ECH1Q13011 328 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 C4orf46Q504U0 113 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 ATPAF1Q5TC12 328 aaPredicted RBP13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 WFDC8Q8IUA0 241 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 ZNF101Q8IZC7 436 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 OR4S1Q8NGB4 309 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 PRRT1Q99946 306 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 CLEC4MQ9H2X3 399 aaPredicted RBP13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 OBP2BQ9NPH6 170 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 IGHV1-18A0A0C4DH31 117 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 F5H5K5 113 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 CDC14BO60729 498 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 SERPINA5P05154 406 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 HCKP08631 526 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 GNB3P16520 340 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 TBPP20226 339 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 SCRN3Q0VDG4 424 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 GRK1Q15835 563 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 GFOD2Q3B7J2 385 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 TMEM104Q8NE00 496 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 CCDC54Q8NEL0 328 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 TNFAIP8L1Q8WVP5 186 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 NICN1Q9BSH3 213 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 DPCDQ9BVM2 203 aaPredicted RBP13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 SELENOIQ9C0D9 397 aa13.62□□□□□ -0.23
CDC42BPB-204ENST00000559043 TUBAL3A6NHL2 446 aa13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 HMSDA8MTL9 139 aa13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 SIAH2O43255 324 aa13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 SSX5O60225 188 aa13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 DHRS3O75911 302 aa13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 GSTP1P09211 210 aaKnown RBP13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 CECR9P0C854 216 aa13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 CXCL2P19875 107 aa13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 C4BPBP20851 252 aa13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 CRYGSP22914 178 aa13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 HOXC12P31275 282 aa13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 ALDH3B1P43353 468 aa13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 RAB35Q15286 201 aa13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 FAM189A2Q15884 450 aa13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 KRTAP27-1Q3LI81 207 aa13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 RNASE10Q5GAN6 216 aaKnown RBP13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 CRIP3Q6Q6R5 217 aa13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 DPPA2Q7Z7J5 298 aa13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 GVQW1Q8N7I0 195 aa13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 OR1F12Q8NHA8 337 aa13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 NUDCD2Q8WVJ2 157 aa13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 NANOS1Q8WY41 292 aaKnown RBP13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 C10orf35Q96D05 121 aa13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 LRRC46Q96FV0 321 aa13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 POM121L2Q96KW2 1035 aa13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 USB1Q9BQ65 265 aaKnown RBP13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 CRIM1Q9NZV1 1036 aa13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 ANAPC10Q9UM13 185 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms