RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 MOB3CQ70IA8 216 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 GDPD3Q7L5L3 318 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 SHFQ7M4L6 423 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 PRSS45Q7RTY3 260 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 OR2W3Q7Z3T1 314 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 ARPINQ7Z6K5 226 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 ZNF329Q86UD4 541 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 SBSPONQ8IVN8 264 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 ZNF695Q8IW36 515 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 COMMD1Q8N668 190 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 ZNF676Q8N7Q3 588 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 KLHL30-AS1Q8NEE0 82 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 OR52L1Q8NGH7 329 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 OR5M8Q8NGP6 311 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 RP9Q8TA86 221 aaKnown RBP4.11□□□□□ -1.75
SPG11-208ENST00000558155 FAM81AQ8TBF8 368 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 GNPDA2Q8TDQ7 276 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 ZNRF4Q8WWF5 429 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 GIMAP1Q8WWP7 306 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 AQP3Q92482 292 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 FAM162AQ96A26 154 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 CREB3L1Q96BA8 519 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 ZNF714Q96N38 554 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 CITED4Q96RK1 184 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 NRIP2Q9BQI9 281 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 SIKE1Q9BRV8 207 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 CLEC7AQ9BXN2 247 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 TMBIM4Q9HC24 238 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 TBC1D23Q9NUY8 699 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 DNAJC27Q9NZQ0 273 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 NDUFAF4Q9P032 175 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 ZNF319Q9P2F9 582 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 OR14J1Q9UGF5 321 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 COMMD3-BMI1R4GMX3 469 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 COL7A1Q02388 2944 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 DSCAML1Q8TD84 2053 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 IGHV2-26A0A0B4J1V2 119 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 A0A0G2JND7 137 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 hADV38S2A0JD32 116 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 SH2D7A6NKC9 451 aaPredicted RBP4.1□□□□□ -1.75
SPG11-208ENST00000558155 OR5B21A6NL26 309 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 SERPINE3A8MV23 424 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 LEUTXA8MZ59 168 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 SEC14L6B5MCN3 397 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 K7N7A8 449 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 NDUFAB1O14561 156 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 GSC2O15499 205 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 NOS1APO75052 506 aaPredicted RBP4.1□□□□□ -1.75
SPG11-208ENST00000558155 GMNNO75496 209 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 NXPH2O95156 264 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 GADD45GO95257 159 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 LY86O95711 162 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 AMY1AP04745 511 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 AMY2AP04746 511 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 FAM106CPP0CH98 169 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 H2AFXP16104 143 aaPredicted RBP4.1□□□□□ -1.75
SPG11-208ENST00000558155 CD24P25063 80 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 ACKR3P25106 362 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 CEACAM3P40198 252 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 MNDAP41218 407 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 GSSP48637 474 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 EDDM3BP56851 147 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 LIPEQ05469 1076 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 TSPAN31Q12999 210 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 KIR2DS1Q14954 304 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 CEP78Q5JTW2 689 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 OR52W1Q6IF63 320 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 CCDC144NLQ6NUI1 221 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 RPL13AP3Q6NVV1 102 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 C18orf65Q6ZTR6 163 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 KRT74Q7RTS7 529 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 RTN4RL2Q86UN3 420 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 ZNF573Q86YE8 665 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 POC1AQ8NBT0 407 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 OR6K6Q8NGW6 343 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 ZNF596Q8TC21 504 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 BCAS4Q8TDM0 211 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 RNF133Q8WVZ7 376 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 HPSE2Q8WWQ2 592 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 LYZL4Q96KX0 146 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 DHRS1Q96LJ7 313 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 OR8B4Q96RC9 309 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 HOPXQ9BPY8 73 aaPredicted RBP4.1□□□□□ -1.75
SPG11-208ENST00000558155 ABHD6Q9BV23 337 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 KRTAP4-2Q9BYR5 136 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 FGF23Q9GZV9 251 aaPredicted RBP4.1□□□□□ -1.75
SPG11-208ENST00000558155 TMEM133Q9H2Q1 129 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 NIPAL2Q9H841 368 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 CMTM6Q9NX76 183 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.1□□□□□ -1.75
SPG11-208ENST00000558155 GLS2Q9UI32 602 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 SCOCQ9UIL1 159 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 ZNF256Q9Y2P7 627 aaPredicted RBP4.1□□□□□ -1.75
SPG11-208ENST00000558155 POLDIP2Q9Y2S7 368 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 LYVE1Q9Y5Y7 322 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 SIRT4Q9Y6E7 314 aaPredicted RBP4.1□□□□□ -1.75
SPG11-208ENST00000558155 SESN1Q9Y6P5 492 aa4.1□□□□□ -1.75
SPG11-208ENST00000558155 V9GYY5 206 aaPredicted RBP4.1□□□□□ -1.75
SPG11-208ENST00000558155 DNAH3Q8TD57 4116 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 KIAA2026Q5HYC2 2103 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms