RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 CT62P0C5K7 136 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 PRKACAP17612 351 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 PRKACBP22694 351 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 TUBG1P23258 451 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 RPS3P23396 243 aaKnown RBP eCLIP4.32□□□□□ -1.72
RTF1-204ENST00000558117 KIR2DS4P43632 304 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 RPS5P46782 204 aaKnown RBP4.32□□□□□ -1.72
RTF1-204ENST00000558117 EVX1P49640 407 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 CRADDP78560 199 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 CDKL1Q00532 357 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 PDIA2Q13087 525 aaKnown RBP4.32□□□□□ -1.72
RTF1-204ENST00000558117 CASP8Q14790 479 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 POU6F1Q14863 301 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 UAP1Q16222 522 aaPredicted RBP4.32□□□□□ -1.72
RTF1-204ENST00000558117 DMKNQ6E0U4 476 aaPredicted RBP4.32□□□□□ -1.72
RTF1-204ENST00000558117 OR4F3Q6IEY1 312 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 AGTRAPQ6RW13 159 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 RFPL4BQ6ZWI9 263 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 ASRGL1Q7L266 308 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 SH2D6Q7Z4S9 175 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 GTPBP8Q8N3Z3 284 aaPredicted RBP4.32□□□□□ -1.72
RTF1-204ENST00000558117 C17orf78Q8N4C9 275 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 OR4D5Q8NGN0 318 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 OR1L4Q8NGR5 311 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 SUN5Q8TC36 379 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 TOMM40LQ969M1 308 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 C11orf52Q96A22 123 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 FMO2Q99518 471 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 VAT1Q99536 393 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 KCNS3Q9BQ31 491 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 GBA3Q9H227 469 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 S100A14Q9HCY8 104 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 TUBG2Q9NRH3 451 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 C1orf123Q9NWV4 160 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 LYARQ9NX58 379 aaKnown RBP4.32□□□□□ -1.72
RTF1-204ENST00000558117 FZR1Q9UM11 496 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 FAT1Q14517 4588 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 GOLGA8TH3BQL2 631 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 ACOX3O15254 700 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 CST1P01037 141 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 FCER2P06734 321 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 CECR9P0C854 216 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 SRMP19623 302 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 ELK3P41970 407 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 CRYBB2P43320 205 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 RAB9AP51151 201 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 FOXA1P55317 472 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 PRPS1P60891 318 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 BDH1Q02338 343 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 MERTKQ12866 999 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 RNASEKQ6P5S7 137 aaKnown RBP4.31□□□□□ -1.72
RTF1-204ENST00000558117 EMBQ6PCB8 327 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 CYHR1Q6ZMK1 362 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 MBOAT1Q6ZNC8 495 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 NET1Q7Z628 596 aaPredicted RBP4.31□□□□□ -1.72
RTF1-204ENST00000558117 SLC25A42Q86VD7 318 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 RNF130Q86XS8 419 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 ZNF100Q8IYN0 542 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 ZBED8Q8IZ13 594 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 OR2L5Q8NG80 312 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 C8orf46Q8TAG6 207 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 GLYATL2Q8WU03 294 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 NEIL2Q969S2 332 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 CPNE4Q96A23 557 aaPredicted RBP4.31□□□□□ -1.72
RTF1-204ENST00000558117 EFHD2Q96C19 240 aaPredicted RBP4.31□□□□□ -1.72
RTF1-204ENST00000558117 NRBF2Q96F24 287 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 BIRC8Q96P09 236 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 ZIM3Q96PE6 472 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 ATF6BQ99941 703 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 TBL1YQ9BQ87 522 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 PELOQ9BRX2 385 aaKnown RBP4.31□□□□□ -1.72
RTF1-204ENST00000558117 ANKRD60Q9BZ19 345 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 ZNF385DQ9H6B1 395 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 CXorf21Q9HAI6 301 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 MED17Q9NVC6 651 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 UBAP1Q9NZ09 502 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 GNG12Q9UBI6 72 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 SLC2A6Q9UGQ3 507 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 TP53TG3Q9ULZ0 132 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 ABCG2Q9UNQ0 655 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 SLC9A8Q9Y2E8 581 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 NPTNQ9Y639 398 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 MAD1L1Q9Y6D9 718 aa4.31□□□□□ -1.72
RTF1-204ENST00000558117 LOC100506127A0A0U1RQW1 187 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 FBLL1A6NHQ2 334 aaKnown RBP4.3□□□□□ -1.72
RTF1-204ENST00000558117 ZNF724A8MTY0 619 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 CLDN25C9JDP6 229 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 H3BQF6 201 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 RAMP3O60896 148 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 IGF1P05019 195 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 FOLR2P14207 255 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 GPX6P59796 221 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 CAV1Q03135 178 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 IFFO1Q0D2I5 559 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 BNIP1Q12981 228 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 PRPSAP1Q14558 356 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 MAD2L1BPQ15013 274 aaPredicted RBP4.3□□□□□ -1.72
RTF1-204ENST00000558117 Q3ZCU0 254 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 SLC25A30Q5SVS4 291 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 PDZK1Q5T2W1 519 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms