RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 AADACL4Q5VUY2 407 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 TEX36Q5VZQ5 186 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 SIGIRRQ6IA17 410 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 TBPL2Q6SJ96 375 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 PGAP1Q75T13 922 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 CROCCP2Q86T23 111 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 SLC51BQ86UW2 128 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 NAA40Q86UY6 237 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 GCSAMQ8N6F7 178 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 FAM216BQ8N7L0 139 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 Q8N7P7 452 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 SLC24A4Q8NFF2 622 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 GJC3Q8NFK1 279 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 OR4S1Q8NGB4 309 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 OR2T6Q8NHC8 308 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 TNFRSF14Q92956 283 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 SLCO4A1Q96BD0 722 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 ZNF583Q96ND8 569 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 TSSK2Q96PF2 358 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 CCL13Q99616 98 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 SSX3Q99909 188 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 NMNAT1Q9HAN9 279 aaPredicted RBP4.76□□□□□ -1.65
VPS33B-207ENST00000557470 ARMC1Q9NVT9 282 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 VSX1Q9NZR4 365 aaPredicted RBP4.76□□□□□ -1.65
VPS33B-207ENST00000557470 KAAG1Q9UBP8 84 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 NDUFAF1Q9Y375 327 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 LRRC42Q9Y546 428 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 MAB21L2Q9Y586 359 aa4.76□□□□□ -1.65
VPS33B-207ENST00000557470 A0A087WUU8 490 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 A0A1B0GVG6 124 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 MAGEA13PA6NCF6 341 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 F8WDY8 70 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 FXYD1O00168 92 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 SOCS2O14508 198 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 FFAR1O14842 300 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 ST8SIA3O43173 380 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 CHST1O43916 411 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 SSX5O60225 188 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 GMDSO60547 372 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 SCGB2A1O75556 95 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 PPP1R3DO95685 299 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 LHBP01229 141 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 LCATP04180 440 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 GSTT2P0CG29 244 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 GSTT2BP0CG30 244 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 MED14OSP0DP75 135 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 CD28P10747 220 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 IGLL1P15814 213 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 CTRB1P17538 263 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 GALP22466 123 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 CDKN2AP42771 156 aaKnown RBP4.75□□□□□ -1.65
VPS33B-207ENST00000557470 KIR2DS4P43632 304 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 UBE2E1P51965 193 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 S100A12P80511 92 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 ZNF92Q03936 586 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 RELQ04864 619 aaPredicted RBP4.75□□□□□ -1.65
VPS33B-207ENST00000557470 PCK2Q16822 640 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 ZBED5Q49AG3 693 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 IFI44LQ53G44 452 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 CYBRD1Q53TN4 286 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 WDR38Q5JTN6 314 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 CTRB2Q6GPI1 263 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 NANOGP8Q6NSW7 305 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 SLC18B1Q6NT16 456 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 CRIP3Q6Q6R5 217 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 C16orf89Q6UX73 402 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 CD300LDQ6UXZ3 194 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 ZNF730Q6ZMV8 503 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 MRPL21Q7Z2W9 205 aaKnown RBP4.75□□□□□ -1.65
VPS33B-207ENST00000557470 SPATA24Q86W54 205 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 CMTM4Q8IZR5 234 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 OFCC1Q8IZS5 231 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 BEND2Q8NDZ0 799 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 OR2AE1Q8NHA4 323 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 ANGPTL6Q8NI99 470 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 ACOT11Q8WXI4 607 aaPredicted RBP4.75□□□□□ -1.65
VPS33B-207ENST00000557470 RORBQ92753 470 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 R3HDM4Q96D70 268 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 SEH1LQ96EE3 360 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 AJUBAQ96IF1 538 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 TPD52L3Q96J77 140 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 PITX2Q99697 317 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 ATF6BQ99941 703 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 FNDC11Q9BVV2 318 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 KRTAP4-9Q9BYQ8 210 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 SLC22A4Q9H015 551 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 RANBP3Q9H6Z4 567 aaPredicted RBP4.75□□□□□ -1.65
VPS33B-207ENST00000557470 GPN1Q9HCN4 374 aaPredicted RBP4.75□□□□□ -1.65
VPS33B-207ENST00000557470 PNRC2Q9NPJ4 139 aaKnown RBP4.75□□□□□ -1.65
VPS33B-207ENST00000557470 C8orf4Q9NR00 106 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 GID8Q9NWU2 228 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 SMPD3Q9NY59 655 aaPredicted RBP4.75□□□□□ -1.65
VPS33B-207ENST00000557470 ADA2Q9NZK5 511 aa4.75□□□□□ -1.65
VPS33B-207ENST00000557470 NKX1-2Q9UD57 310 aaPredicted RBP4.75□□□□□ -1.65
VPS33B-207ENST00000557470 NOP16Q9Y3C1 178 aaKnown RBP4.75□□□□□ -1.65
VPS33B-207ENST00000557470 IGLV1-36A0A0B4J1U3 117 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 LOC105371267A0A1B0GV96 52 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 C13orf42A0A1B0GVH6 325 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 C5orf51A6NDU8 294 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 GGT3PA6NGU5 568 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms