RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 PEA15Q15121 130 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 ZNF672Q499Z4 452 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-246ENST00000557030 WDR38Q5JTN6 314 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 TEX30Q5JUR7 227 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 FAM74A1Q5RGS3 127 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 C1orf100Q5SVJ3 147 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 LCE1EQ5T753 118 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 STPG1Q5TH74 334 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 TMEM244Q5VVB8 128 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 PMS2CLQ68D20 193 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 TMEM225Q6GV28 225 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 H3F3CQ6NXT2 135 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 UNQ6126/PRO20091Q6UXV3 157 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 OOSP2Q86WS3 158 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 BAP18Q8IXM2 172 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 ODF3L1Q8IXM7 274 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 ZNF679Q8IYX0 411 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 PUSL1Q8N0Z8 303 aaKnown RBP4.07□□□□□ -1.76
ATXN3-246ENST00000557030 PRSS35Q8N3Z0 413 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 CSNK1A1LQ8N752 337 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 DMBX1Q8NFW5 382 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 OR4K17Q8NGC6 315 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 OR5AP2Q8NGF4 316 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 OR1S2Q8NGQ3 325 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 OR1J2Q8NGS2 313 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 OR8S1Q8NH09 359 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 CCL4L1Q8NHW4 92 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 GLYATL2Q8WU03 294 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 PPP1R1CQ8WVI7 109 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 ZNRF4Q8WWF5 429 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 FAM46BQ96A09 425 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 ANKRD9Q96BM1 317 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-246ENST00000557030 PIK3IP1Q96FE7 263 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 PGAM5Q96HS1 289 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 VSTM2LQ96N03 204 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 CMKLR1Q99788 373 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 CCDC3Q9BQI4 270 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 SRSF8Q9BRL6 282 aaKnown RBP4.07□□□□□ -1.76
ATXN3-246ENST00000557030 SLC7A5P2Q9GIP4 190 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 CHST6Q9GZX3 395 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 CHMP1AQ9HD42 196 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-246ENST00000557030 TREM1Q9NP99 234 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 MMP25Q9NPA2 562 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 FBXL17Q9UF56 701 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 HHLA2Q9UM44 414 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 KLHDC2Q9Y2U9 406 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 MEMO1Q9Y316 297 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 WIF1Q9Y5W5 379 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 CFAP54Q96N23 3096 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 TRANK1O15050 2925 aa4.07□□□□□ -1.76
ATXN3-246ENST00000557030 HEATR5BQ9P2D3 2071 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 TICRRQ7Z2Z1 1910 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 IGKV1D-42A0A075B6H8 117 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 TRAV36DV7A0A075B6V5 113 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 IGHV4OR15-8A0A075B7B6 117 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 LOC390937A0A1W2PQ73 354 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 MEIS3P1A6NDR6 274 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 C5orf51A6NDU8 294 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 SHISA7A6NL88 538 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 CDRT15L2A8MXV6 281 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 C1orf196B1AJZ1 125 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 PRR32B1ATL7 298 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 GPR31O00270 319 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 CLDN4O14493 209 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 FADS1O60427 444 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 STK17BO94768 372 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 AKR7A3O95154 331 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 IGKV1D-16P01601 117 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 IGHMP01871 453 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 IFNA6P05013 189 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 ISG15P05161 165 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 CRHP06850 196 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 DCNP07585 359 aaKnown RBP4.06□□□□□ -1.76
ATXN3-246ENST00000557030 ERCC1P07992 297 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-246ENST00000557030 HSD11B1P28845 292 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 CRABP1P29762 137 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 ACTR1BP42025 376 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 RPL35P42766 123 aaKnown RBP4.06□□□□□ -1.76
ATXN3-246ENST00000557030 MAGEB1P43366 347 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 RABIFP47224 123 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 CAV2P51636 162 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 ATP1B3P54709 279 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 ACTR1AP61163 376 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 RPL18Q07020 188 aaKnown RBP4.06□□□□□ -1.76
ATXN3-246ENST00000557030 PLA2G7Q13093 441 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 SKP2Q13309 424 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 TOMM34Q15785 309 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-246ENST00000557030 MEP1BQ16820 701 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 ZNF528Q3MIS6 628 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 RNF212Q495C1 297 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 CDNFQ49AH0 187 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 SCGB2B2Q4G0G5 96 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 KLHL26Q53HC5 615 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 MESTQ5EB52 335 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 GLYATL3Q5SZD4 288 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 GGNBP1Q5YKI7 109 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 NSUN5P2Q63ZY6 315 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 PRSS54Q6PEW0 395 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 DNM1P34Q6PK57 102 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 DEGS2Q6QHC5 323 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms