RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 PDPK2PQ6A1A2 396 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 C12orf54Q6X4T0 127 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 ZNF429Q86V71 674 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 DHFR2Q86XF0 187 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 ERO1BQ86YB8 467 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 TCTE3Q8IZS6 198 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 C8orf59Q8N0T1 100 aaPredicted RBP2.97□□□□□ -1.93
PRPF39-210ENST00000556718 CHST4Q8NCG5 386 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 BPIFB6Q8NFQ5 453 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 OR51G1Q8NGK1 321 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 ITFG1Q8TB96 612 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 OR51E1Q8TCB6 317 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 RORBQ92753 470 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 TCEAL3Q969E4 200 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 NTAN1Q96AB6 310 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 ZNF707Q96C28 371 aaPredicted RBP2.97□□□□□ -1.93
PRPF39-210ENST00000556718 ZHX1-C8orf76Q96EF9 292 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 MSANTD3Q96H12 275 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 CENPNQ96H22 339 aaPredicted RBP2.97□□□□□ -1.93
PRPF39-210ENST00000556718 ZNF285Q96NJ3 590 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 C12orf57Q99622 126 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 GPR21Q99679 349 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 FOXC2Q99958 501 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 SLC25A2Q9BXI2 301 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 DEFB129Q9H1M3 183 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 LHX5Q9H2C1 402 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 DSN1Q9H410 356 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 SAV1Q9H4B6 383 aaPredicted RBP2.97□□□□□ -1.93
PRPF39-210ENST00000556718 NXF3Q9H4D5 531 aaKnown RBP2.97□□□□□ -1.93
PRPF39-210ENST00000556718 FBXO44Q9H4M3 255 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 C6orf50Q9HD87 102 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 ISYNA1Q9NPH2 558 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 TAS2R9Q9NYW1 312 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 USE1Q9NZ43 259 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 GINS2Q9Y248 185 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 TPRKBQ9Y3C4 175 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 KIF20BQ96Q89 1820 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 CLUHO75153 1309 aa2.96□□□□□ -1.93
PRPF39-210ENST00000556718 KIF1BO60333 1816 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 TET3O43151 1660 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 IGLV11-55A0A075B6I3 123 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 LOC100653049A0A140TA62 436 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 OR6C70A6NIJ9 312 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 ZNF99A8MXY4 864 aaPredicted RBP2.96□□□□□ -1.94
PRPF39-210ENST00000556718 KLLNB2CW77 178 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 TRAF3IP2O43734 574 aaPredicted RBP2.96□□□□□ -1.94
PRPF39-210ENST00000556718 NIPSNAP2O75323 286 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 CA11O75493 328 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 KRT34O76011 436 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 SLC22A5O76082 557 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 SCELO95171 688 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 TNNC2P02585 160 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 C1QBP02746 253 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 FABP1P07148 127 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 GNAO1P09471 354 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 ZNF19P17023 458 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 RCC1P18754 421 aaPredicted RBP2.96□□□□□ -1.94
PRPF39-210ENST00000556718 CSNK2A2P19784 350 aaPredicted RBP2.96□□□□□ -1.94
PRPF39-210ENST00000556718 IVDP26440 423 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 CEACAM3P40198 252 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 CDKN2BP42772 138 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 CXCL5P42830 114 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 ERFP50548 548 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 RAB13P51153 203 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 RND2P52198 227 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 PSMC5P62195 406 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 LCN2P80188 198 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 SEMG2Q02383 582 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 FADDQ13158 208 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 COTL1Q14019 142 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 TFDP2Q14188 446 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 MPPED2Q15777 294 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 ZNF404Q494X3 552 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 TMEM255AQ5JRV8 349 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 NPSR1Q6W5P4 371 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 FAM122BQ7Z309 247 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 ABHD12BQ7Z5M8 362 aaPredicted RBP2.96□□□□□ -1.94
PRPF39-210ENST00000556718 COMMD7Q86VX2 200 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 UNC93AQ86WB7 457 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 FAM71AQ8IYT1 594 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 TRAM1L1Q8N609 369 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 C12orf29Q8N999 325 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 GDPD1Q8N9F7 314 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 ZNF565Q8N9K5 539 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 FBXO36Q8NEA4 188 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 OR52E2Q8NGJ4 325 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 OR52N1Q8NH53 320 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 CLHC1Q8NHS4 586 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 DCAKDQ8WVC6 231 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 C1orf54Q8WWF1 131 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 RAB1CQ92928 201 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 YIPF5Q969M3 257 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 ISOC2Q96AB3 205 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 GALNT14Q96FL9 552 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 HOPXQ9BPY8 73 aaPredicted RBP2.96□□□□□ -1.94
PRPF39-210ENST00000556718 CCDC90BQ9GZT6 254 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 GAL3ST2Q9H3Q3 398 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 RGS18Q9NS28 235 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 IL37Q9NZH6 218 aa2.96□□□□□ -1.94
PRPF39-210ENST00000556718 RPS6KB2Q9UBS0 482 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms