RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 PGLYRP3Q96LB9 341 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 OR8B2Q96RD0 313 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 NRIP2Q9BQI9 281 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 SSBP3Q9BWW4 388 aaPredicted RBP8.02□□□□□ -1.13
SRP54-210ENST00000556380 TMPRSS13Q9BYE2 586 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 PKIBQ9C010 78 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 PLEKHA1Q9HB21 404 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 HES4Q9HCC6 221 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 RASL12Q9NYN1 266 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 DUX4Q9UBX2 424 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 ZNF222Q9UK12 451 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 CDC42EP3Q9UKI2 254 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 SLC7A11Q9UPY5 501 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 ZNF281Q9Y2X9 895 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 LSM2Q9Y333 95 aaKnown RBP8.02□□□□□ -1.13
SRP54-210ENST00000556380 FBN1P35555 2871 aaKnown RBP8.02□□□□□ -1.13
SRP54-210ENST00000556380 TRBV5-5A0A0J9YX44 114 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 KIR2DS1A0A191URI9 304 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 FAM230AA0A1W2PPH8 454 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 F8VVB4 439 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 F8VWA3 439 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 J3QLI3 93 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 ADAM20O43506 726 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 DENRO43583 198 aaKnown RBP8.01□□□□□ -1.13
SRP54-210ENST00000556380 TFF1P04155 84 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 PSG2P11465 335 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 ZNF20P17024 532 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 PCMT1P22061 227 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 PRKACBP22694 351 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 GATA3P23771 443 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 WNT4P56705 351 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 PAX8Q06710 450 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 ACSM1Q08AH1 577 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 IL24Q13007 206 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 CNN3Q15417 329 aaKnown RBP8.01□□□□□ -1.13
SRP54-210ENST00000556380 CHRFAM7AQ494W8 412 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 ESCO2Q56NI9 601 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 FAHD2BQ6P2I3 314 aaPredicted RBP8.01□□□□□ -1.13
SRP54-210ENST00000556380 ZNF788Q6ZQV5 615 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 NLRC3Q7RTR2 1065 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 ZFP41Q8N8Y5 198 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 OR5T2Q8NGG2 359 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 TRMT10AQ8TBZ6 339 aaKnown RBP8.01□□□□□ -1.13
SRP54-210ENST00000556380 GPR148Q8TDV2 347 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 NPRL2Q8WTW4 380 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 SPSB1Q96BD6 273 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 FAHD2AQ96GK7 314 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 ZNF488Q96MN9 340 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 CCL13Q99616 98 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 ZNF184Q99676 751 aaPredicted RBP8.01□□□□□ -1.13
SRP54-210ENST00000556380 BEX2Q9BXY8 128 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 COMMD4Q9H0A8 199 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 DNTTIP1Q9H147 329 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 ZCCHC4Q9H5U6 513 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 SMURF1Q9HCE7 757 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 SCN3BQ9NY72 215 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 MTCH1Q9NZJ7 389 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 NLKQ9UBE8 527 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 LPAR3Q9UBY5 353 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 CLN8Q9UBY8 286 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 TPRKBQ9Y3C4 175 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 INSIG2Q9Y5U4 225 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 STAB1Q9NY15 2570 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 DOCK11Q5JSL3 2073 aa8.01□□□□□ -1.13
SRP54-210ENST00000556380 IGKV1D-17A0A075B6S4 117 aa8□□□□□ -1.13
SRP54-210ENST00000556380 LOC105371242A0A075B767 164 aa8□□□□□ -1.13
SRP54-210ENST00000556380 A0A0G2JMP0 313 aa8□□□□□ -1.13
SRP54-210ENST00000556380 A0A0X1KG70 313 aa8□□□□□ -1.13
SRP54-210ENST00000556380 OR2AT4A6NND4 320 aa8□□□□□ -1.13
SRP54-210ENST00000556380 C22orf46C9J442 243 aa8□□□□□ -1.13
SRP54-210ENST00000556380 DVL1O14640 695 aa8□□□□□ -1.13
SRP54-210ENST00000556380 GPX5O75715 221 aa8□□□□□ -1.13
SRP54-210ENST00000556380 FSHBP01225 129 aa8□□□□□ -1.13
SRP54-210ENST00000556380 FAM157CP0CG43 387 aa8□□□□□ -1.13
SRP54-210ENST00000556380 GLRA1P23415 457 aa8□□□□□ -1.13
SRP54-210ENST00000556380 AZGP1P25311 298 aaKnown RBP8□□□□□ -1.13
SRP54-210ENST00000556380 RBP2P50120 134 aa8□□□□□ -1.13
SRP54-210ENST00000556380 NPY4RP50391 375 aa8□□□□□ -1.13
SRP54-210ENST00000556380 ATP1B3P54709 279 aa8□□□□□ -1.13
SRP54-210ENST00000556380 TAS2R43P59537 309 aa8□□□□□ -1.13
SRP54-210ENST00000556380 GMFBP60983 142 aa8□□□□□ -1.13
SRP54-210ENST00000556380 GNB2P62879 340 aa8□□□□□ -1.13
SRP54-210ENST00000556380 BDH1Q02338 343 aa8□□□□□ -1.13
SRP54-210ENST00000556380 PDZK1IP1Q13113 114 aa8□□□□□ -1.13
SRP54-210ENST00000556380 DGUOKQ16854 277 aa8□□□□□ -1.13
SRP54-210ENST00000556380 YIF1BQ5BJH7 314 aa8□□□□□ -1.13
SRP54-210ENST00000556380 RBM48Q5RL73 367 aaKnown RBP8□□□□□ -1.13
SRP54-210ENST00000556380 DCAF12L2Q5VW00 463 aa8□□□□□ -1.13
SRP54-210ENST00000556380 ACP7Q6ZNF0 438 aa8□□□□□ -1.13
SRP54-210ENST00000556380 IL17RELQ6ZVW7 336 aa8□□□□□ -1.13
SRP54-210ENST00000556380 PRIMA1Q86XR5 153 aa8□□□□□ -1.13
SRP54-210ENST00000556380 SERPINA12Q8IW75 414 aa8□□□□□ -1.13
SRP54-210ENST00000556380 FGFRL1Q8N441 504 aa8□□□□□ -1.13
SRP54-210ENST00000556380 FAM216BQ8N7L0 139 aa8□□□□□ -1.13
SRP54-210ENST00000556380 OR4M2Q8NGB6 313 aa8□□□□□ -1.13
SRP54-210ENST00000556380 OR5D14Q8NGL3 314 aa8□□□□□ -1.13
SRP54-210ENST00000556380 OR13C5Q8NGS8 318 aa8□□□□□ -1.13
SRP54-210ENST00000556380 OR13C9Q8NGT0 318 aa8□□□□□ -1.13
SRP54-210ENST00000556380 RAB40AQ8WXH6 277 aa8□□□□□ -1.13
SRP54-210ENST00000556380 BORCS8Q96FH0 119 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms