RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 NINLQ9Y2I6 1382 aa0.57□□□□□ -2.32
SNX6-204ENST00000555541 LCTP09848 1927 aa0.56□□□□□ -2.32
SNX6-204ENST00000555541 MIA3Q5JRA6 1907 aa0.56□□□□□ -2.32
SNX6-204ENST00000555541 SHANK3Q9BYB0 1731 aa0.56□□□□□ -2.32
SNX6-204ENST00000555541 KCNE1BA0A087WTH5 132 aa0.56□□□□□ -2.32
SNX6-204ENST00000555541 WBP4O75554 376 aaKnown RBP0.56□□□□□ -2.32
SNX6-204ENST00000555541 GFAPP14136 432 aa0.56□□□□□ -2.32
SNX6-204ENST00000555541 RGS8P57771 180 aaPredicted RBP0.56□□□□□ -2.32
SNX6-204ENST00000555541 PRB3Q04118 309 aaPredicted RBP0.56□□□□□ -2.32
SNX6-204ENST00000555541 TMEM176BQ3YBM2 270 aaPredicted RBP0.56□□□□□ -2.32
SNX6-204ENST00000555541 LRRC66Q68CR7 880 aa0.56□□□□□ -2.32
SNX6-204ENST00000555541 FAM231DQ6ZW35 169 aa0.56□□□□□ -2.32
SNX6-204ENST00000555541 NDUFAF7Q7L592 441 aa0.56□□□□□ -2.32
SNX6-204ENST00000555541 PRNTQ86SH4 94 aa0.56□□□□□ -2.32
SNX6-204ENST00000555541 SLC7A5P1Q8MH63 180 aa0.56□□□□□ -2.32
SNX6-204ENST00000555541 GSDMAQ96QA5 445 aa0.56□□□□□ -2.32
SNX6-204ENST00000555541 MRPL20Q9BYC9 149 aaKnown RBP0.56□□□□□ -2.32
SNX6-204ENST00000555541 MCUBQ9NWR8 336 aa0.56□□□□□ -2.32
SNX6-204ENST00000555541 AMMECR1Q9Y4X0 333 aaPredicted RBP0.56□□□□□ -2.32
SNX6-204ENST00000555541 OR51B2Q9Y5P1 312 aa0.56□□□□□ -2.32
SNX6-204ENST00000555541 ZNF780BQ9Y6R6 833 aa0.56□□□□□ -2.32
SNX6-204ENST00000555541 TRPM6Q9BX84 2022 aa0.55□□□□□ -2.32
SNX6-204ENST00000555541 GOLGA8OA6NCC3 632 aa0.55□□□□□ -2.32
SNX6-204ENST00000555541 F5H5P2 479 aa0.55□□□□□ -2.32
SNX6-204ENST00000555541 GOLGA8NF8WBI6 632 aa0.55□□□□□ -2.32
SNX6-204ENST00000555541 UPK1AO00322 258 aa0.55□□□□□ -2.32
SNX6-204ENST00000555541 FCN3O75636 299 aa0.55□□□□□ -2.32
SNX6-204ENST00000555541 TTC4O95801 387 aa0.55□□□□□ -2.32
SNX6-204ENST00000555541 IFNW1P05000 195 aa0.55□□□□□ -2.32
SNX6-204ENST00000555541 CGB7P0DN87 165 aa0.55□□□□□ -2.32
SNX6-204ENST00000555541 LYNX1P0DP58 116 aa0.55□□□□□ -2.32
SNX6-204ENST00000555541 MLNP12872 115 aa0.55□□□□□ -2.32
SNX6-204ENST00000555541 CTLA4P16410 223 aa0.55□□□□□ -2.32
SNX6-204ENST00000555541 HMOX2P30519 316 aa0.55□□□□□ -2.32
SNX6-204ENST00000555541 MTPNP58546 118 aa0.55□□□□□ -2.32
SNX6-204ENST00000555541 BCL2A1Q16548 175 aa0.55□□□□□ -2.32
SNX6-204ENST00000555541 NOXRED1Q6NXP6 359 aa0.55□□□□□ -2.32
SNX6-204ENST00000555541 DAW1Q8N136 415 aa0.55□□□□□ -2.32
SNX6-204ENST00000555541 LINC00337Q8N6G1 96 aa0.55□□□□□ -2.32
SNX6-204ENST00000555541 ITFG1Q8TB96 612 aa0.55□□□□□ -2.32
SNX6-204ENST00000555541 SPACA5Q96QH8 159 aa0.55□□□□□ -2.32
SNX6-204ENST00000555541 ARV1Q9H2C2 271 aa0.55□□□□□ -2.32
SNX6-204ENST00000555541 OR5V1Q9UGF6 321 aa0.55□□□□□ -2.32
SNX6-204ENST00000555541 KLF13Q9Y2Y9 288 aaPredicted RBP0.55□□□□□ -2.32
SNX6-204ENST00000555541 HSPE1-MOB4S4R3N1 261 aa0.55□□□□□ -2.32
SNX6-204ENST00000555541 A0A0J9YYE9 177 aa0.54□□□□□ -2.32
SNX6-204ENST00000555541 ERICH4A6NGS2 130 aa0.54□□□□□ -2.32
SNX6-204ENST00000555541 H3BRN7 92 aa0.54□□□□□ -2.32
SNX6-204ENST00000555541 XRCC2O43543 280 aa0.54□□□□□ -2.32
SNX6-204ENST00000555541 NDUFS5O43920 106 aa0.54□□□□□ -2.32
SNX6-204ENST00000555541 OR2A4O95047 310 aa0.54□□□□□ -2.32
SNX6-204ENST00000555541 TRBC1P01850 177 aa0.54□□□□□ -2.32
SNX6-204ENST00000555541 HLA-AP01891 365 aaKnown RBP0.54□□□□□ -2.32
SNX6-204ENST00000555541 KRT14P02533 472 aa0.54□□□□□ -2.32
SNX6-204ENST00000555541 BLVRBP30043 206 aaPredicted RBP0.54□□□□□ -2.32
SNX6-204ENST00000555541 PSMB2P49721 201 aa0.54□□□□□ -2.32
SNX6-204ENST00000555541 C21orf59P57076 290 aa0.54□□□□□ -2.32
SNX6-204ENST00000555541 ST3GAL4Q11206 333 aa0.54□□□□□ -2.32
SNX6-204ENST00000555541 TNXAQ16473 311 aa0.54□□□□□ -2.32
SNX6-204ENST00000555541 CEP55Q53EZ4 464 aa0.54□□□□□ -2.32
SNX6-204ENST00000555541 ARMC12Q5T9G4 340 aa0.54□□□□□ -2.32
SNX6-204ENST00000555541 GABRG1Q8N1C3 465 aa0.54□□□□□ -2.32
SNX6-204ENST00000555541 CYB561A3Q8NBI2 242 aa0.54□□□□□ -2.32
SNX6-204ENST00000555541 OR2K2Q8NGT1 345 aa0.54□□□□□ -2.32
SNX6-204ENST00000555541 ZNF563Q8TA94 476 aa0.54□□□□□ -2.32
SNX6-204ENST00000555541 PYURFQ96I23 114 aa0.54□□□□□ -2.32
SNX6-204ENST00000555541 DNAJC30Q96LL9 226 aa0.54□□□□□ -2.32
SNX6-204ENST00000555541 OR2A7Q96R45 310 aa0.54□□□□□ -2.32
SNX6-204ENST00000555541 OR51B5Q9H339 312 aa0.54□□□□□ -2.32
SNX6-204ENST00000555541 TMEM185BQ9H7F4 350 aa0.54□□□□□ -2.32
SNX6-204ENST00000555541 SLC7A11Q9UPY5 501 aa0.54□□□□□ -2.32
SNX6-204ENST00000555541 FN1P02751 2386 aaKnown RBP0.53□□□□□ -2.32
SNX6-204ENST00000555541 C17orf98A8MV24 154 aa0.53□□□□□ -2.32
SNX6-204ENST00000555541 J3QT63 122 aa0.53□□□□□ -2.32
SNX6-204ENST00000555541 CPLX1O14810 134 aa0.53□□□□□ -2.32
SNX6-204ENST00000555541 CACNG3O60359 315 aa0.53□□□□□ -2.32
SNX6-204ENST00000555541 CIB2O75838 187 aa0.53□□□□□ -2.32
SNX6-204ENST00000555541 KRT16P08779 473 aa0.53□□□□□ -2.32
SNX6-204ENST00000555541 RPL10AP62906 217 aaKnown RBP0.53□□□□□ -2.32
SNX6-204ENST00000555541 SLC35A1P78382 337 aa0.53□□□□□ -2.32
SNX6-204ENST00000555541 RPL18AQ02543 176 aaKnown RBP0.53□□□□□ -2.32
SNX6-204ENST00000555541 HES1Q14469 280 aa0.53□□□□□ -2.32
SNX6-204ENST00000555541 RPEL1Q2QD12 228 aa0.53□□□□□ -2.32
SNX6-204ENST00000555541 PYCR3Q53H96 274 aa0.53□□□□□ -2.32
SNX6-204ENST00000555541 SPIN4Q56A73 249 aa0.53□□□□□ -2.32
SNX6-204ENST00000555541 CARD17Q5XLA6 110 aa0.53□□□□□ -2.32
SNX6-204ENST00000555541 TWF2Q6IBS0 349 aaKnown RBP0.53□□□□□ -2.32
SNX6-204ENST00000555541 CENPQQ7L2Z9 268 aaPredicted RBP0.53□□□□□ -2.32
SNX6-204ENST00000555541 TAS2R42Q7RTR8 314 aa0.53□□□□□ -2.32
SNX6-204ENST00000555541 APRG1Q8IVJ8 170 aa0.53□□□□□ -2.32
SNX6-204ENST00000555541 CACNG8Q8WXS5 425 aa0.53□□□□□ -2.32
SNX6-204ENST00000555541 B9D2Q9BPU9 175 aa0.53□□□□□ -2.32
SNX6-204ENST00000555541 MTG1Q9BT17 334 aaPredicted RBP0.53□□□□□ -2.32
SNX6-204ENST00000555541 SRRQ9GZT4 340 aa0.53□□□□□ -2.32
SNX6-204ENST00000555541 FAM206AQ9NX38 181 aa0.53□□□□□ -2.32
SNX6-204ENST00000555541 AK9Q5TCS8 1911 aa0.53□□□□□ -2.32
SNX6-204ENST00000555541 ATAD2BQ9ULI0 1458 aa0.53□□□□□ -2.33
SNX6-204ENST00000555541 TMEM131Q92545 1883 aa0.52□□□□□ -2.33
SNX6-204ENST00000555541 TRAV8-4A0A0B4J246 113 aa0.52□□□□□ -2.33
SNX6-204ENST00000555541 ZNF189O75820 626 aaPredicted RBP0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms