RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 BEX1Q9HBH7 125 aa9.71□□□□□ -0.86
VRK1-204ENST00000555351 EXOGQ9Y2C4 368 aaKnown RBP9.71□□□□□ -0.86
VRK1-204ENST00000555351 hCG_1809904A0A1W2PP81 198 aa9.7□□□□□ -0.86
VRK1-204ENST00000555351 A0A1W2PPE2 198 aa9.7□□□□□ -0.86
VRK1-204ENST00000555351 A0A1W2PR64 198 aa9.7□□□□□ -0.86
VRK1-204ENST00000555351 A0A1W2PRV1 198 aa9.7□□□□□ -0.86
VRK1-204ENST00000555351 DAPL1A0PJW8 107 aa9.7□□□□□ -0.86
VRK1-204ENST00000555351 NPFFO15130 113 aa9.7□□□□□ -0.86
VRK1-204ENST00000555351 SLC16A6O15403 523 aa9.7□□□□□ -0.86
VRK1-204ENST00000555351 ENTPD6O75354 484 aa9.7□□□□□ -0.86
VRK1-204ENST00000555351 RAG2P55895 527 aa9.7□□□□□ -0.86
VRK1-204ENST00000555351 MRPL28Q13084 256 aaKnown RBP9.7□□□□□ -0.86
VRK1-204ENST00000555351 CNN3Q15417 329 aaKnown RBP9.7□□□□□ -0.86
VRK1-204ENST00000555351 UBE2V2Q15819 145 aa9.7□□□□□ -0.86
VRK1-204ENST00000555351 FIP1L1Q6UN15 594 aaKnown RBP9.7□□□□□ -0.86
VRK1-204ENST00000555351 UTS2BQ765I0 119 aa9.7□□□□□ -0.86
VRK1-204ENST00000555351 Q8IYB0 196 aa9.7□□□□□ -0.86
VRK1-204ENST00000555351 CBR4Q8N4T8 237 aa9.7□□□□□ -0.86
VRK1-204ENST00000555351 CD177Q8N6Q3 437 aa9.7□□□□□ -0.86
VRK1-204ENST00000555351 OR2G2Q8NGZ5 317 aa9.7□□□□□ -0.86
VRK1-204ENST00000555351 OR5R1Q8NH85 324 aa9.7□□□□□ -0.86
VRK1-204ENST00000555351 HAVCR2Q8TDQ0 301 aa9.7□□□□□ -0.86
VRK1-204ENST00000555351 RNF166Q96A37 237 aaPredicted RBP9.7□□□□□ -0.86
VRK1-204ENST00000555351 RNFT2Q96EX2 444 aa9.7□□□□□ -0.86
VRK1-204ENST00000555351 CEP19Q96LK0 163 aa9.7□□□□□ -0.86
VRK1-204ENST00000555351 SIRT7Q9NRC8 400 aa9.7□□□□□ -0.86
VRK1-204ENST00000555351 C1RLQ9NZP8 487 aa9.7□□□□□ -0.86
VRK1-204ENST00000555351 ZNRD1Q9P1U0 126 aa9.7□□□□□ -0.86
VRK1-204ENST00000555351 GNG8Q9UK08 70 aa9.7□□□□□ -0.86
VRK1-204ENST00000555351 SF3B6Q9Y3B4 125 aaKnown RBP9.7□□□□□ -0.86
VRK1-204ENST00000555351 NBEAL1Q6ZS30 2694 aa9.7□□□□□ -0.86
VRK1-204ENST00000555351 LOC107986453A0A1B0GWG9 222 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 BTBD17A6NE02 478 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 H0YAE9 185 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 SPRY1O43609 319 aaPredicted RBP9.69□□□□□ -0.86
VRK1-204ENST00000555351 APOL3O95236 402 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 RBP4P02753 201 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 TK1P04183 234 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 CHRM2P08172 466 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 GABRB1P18505 474 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 PRKACBP22694 351 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 SAA4P35542 130 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 KIR3DL2P43630 455 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 RBP2P50120 134 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 RPL31P62899 125 aaKnown RBP9.69□□□□□ -0.86
VRK1-204ENST00000555351 AANATQ16613 207 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 TP53I3Q53FA7 332 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 DMRTC1Q5HYR2 192 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 ENTHD1Q8IYW4 607 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 SYS1Q8N2H4 156 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 RHOXF1Q8NHV9 184 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 UBE2FQ969M7 185 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 SPSB1Q96BD6 273 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 BORCS8Q96FH0 119 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 RDH12Q96NR8 316 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 MBOAT4Q96T53 435 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 HEXA-AS1Q9H8Q6 139 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 RHOFQ9HBH0 211 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 INPP5EQ9NRR6 644 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 MRPS18AQ9NVS2 196 aaKnown RBP9.69□□□□□ -0.86
VRK1-204ENST00000555351 BOLA1Q9Y3E2 137 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 GMPPBQ9Y5P6 360 aa9.69□□□□□ -0.86
VRK1-204ENST00000555351 FAM230AA0A1W2PPH8 454 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 CLPSL1A2RUU4 121 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 K7N7A8 449 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 GPR137BO60478 399 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 FADS2O95864 444 aaKnown RBP9.68□□□□□ -0.86
VRK1-204ENST00000555351 CYB5AP00167 134 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 IGHV4-59P01825 116 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 IGHA1P01876 353 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 MT-ND2P03891 347 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 TFF1P04155 84 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 MDKP21741 143 aaPredicted RBP9.68□□□□□ -0.86
VRK1-204ENST00000555351 CAPZA1P52907 286 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 ATP1B3P54709 279 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 MEF2CQ06413 473 aaPredicted RBP9.68□□□□□ -0.86
VRK1-204ENST00000555351 GALEQ14376 348 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 OLFML2AQ68BL7 652 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 TMEM200BQ69YZ2 307 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 ZBTB49Q6ZSB9 765 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 ANGPTL5Q86XS5 388 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 MKXQ8IYA7 352 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 PQLC1Q8N2U9 271 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 BEND2Q8NDZ0 799 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 ZNF488Q96MN9 340 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 NEK6Q9HC98 313 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 S100A14Q9HCY8 104 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 C19orf12Q9NSK7 152 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 MTCH1Q9NZJ7 389 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 FRRS1LQ9P0K9 344 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 VPREB3Q9UKI3 123 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 HHLA2Q9UM44 414 aa9.68□□□□□ -0.86
VRK1-204ENST00000555351 IGKV1-27A0A075B6S5 117 aa9.67□□□□□ -0.86
VRK1-204ENST00000555351 LOC100130705A0A1B0GUX0 176 aa9.67□□□□□ -0.86
VRK1-204ENST00000555351 MEIOCA2RUB1 952 aa9.67□□□□□ -0.86
VRK1-204ENST00000555351 A6NIN4 97 aa9.67□□□□□ -0.86
VRK1-204ENST00000555351 ZNF737O75373 536 aa9.67□□□□□ -0.86
VRK1-204ENST00000555351 ALX3O95076 343 aa9.67□□□□□ -0.86
VRK1-204ENST00000555351 PAHP00439 452 aa9.67□□□□□ -0.86
VRK1-204ENST00000555351 HTR1AP08908 422 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms