RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 TTC21AQ8NDW8 1320 aa3.7□□□□□ -1.82
VRK1-203ENST00000555067 PALLDQ8WX93 1383 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 RBFOX3A6NFN3 312 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 CEACAM18A8MTB9 384 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 EFCAB9A8MZ26 197 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 F5H5K5 113 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 MYL12BO14950 172 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 AZIN1O14977 448 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 PFDN6O15212 129 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 NDUFS5O43920 106 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 NPIPB7O75200 414 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 SLC22A5O76082 557 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 SUPT7LO94864 414 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 THY1P04216 161 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 CDK1P06493 297 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 POLR2IP36954 125 aaKnown RBP3.69□□□□□ -1.82
VRK1-203ENST00000555067 CAPZBP47756 277 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 GCLMP48507 274 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 TTPAP49638 278 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 MEOX2P50222 304 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 MRPS25P82663 173 aaKnown RBP3.69□□□□□ -1.82
VRK1-203ENST00000555067 CYP24A1Q07973 514 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 TSPAN31Q12999 210 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 NAB1Q13506 487 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 CASP8Q14790 479 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 RBMY1FQ15415 496 aaKnown RBP3.69□□□□□ -1.82
VRK1-203ENST00000555067 Q1RN00 199 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 HLA-DRB5Q30154 266 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 SLC25A35Q3KQZ1 300 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 SPIN4Q56A73 249 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 AVPI1Q5T686 147 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 LPCAT4Q643R3 524 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 CD200R1LQ6Q8B3 271 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 RNF165Q6ZSG1 346 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 FAM183BPQ6ZVS7 135 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 NCCRP1Q6ZVX7 275 aaPredicted RBP3.69□□□□□ -1.82
VRK1-203ENST00000555067 FAM19A5Q7Z5A7 132 aaPredicted RBP3.69□□□□□ -1.82
VRK1-203ENST00000555067 NPBQ8NG41 125 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 PIGXQ8TBF5 258 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 DCUN1D4Q92564 292 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 RERGQ96A58 199 aaPredicted RBP3.69□□□□□ -1.82
VRK1-203ENST00000555067 RILPQ96NA2 401 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 WFIKKN1Q96NZ8 548 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 OR51B6Q9H340 312 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 RHOFQ9HBH0 211 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 FBXO6Q9NRD1 293 aaPredicted RBP3.69□□□□□ -1.82
VRK1-203ENST00000555067 ANAPC11Q9NYG5 84 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 COMMD9Q9P000 198 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 TP53TG1Q9Y2A0 90 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 TP53TG5Q9Y2B4 290 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 C9orf84Q5VXU9 1444 aa3.69□□□□□ -1.82
VRK1-203ENST00000555067 ABCC11Q96J66 1382 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 IGKV1-27A0A075B6S5 117 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 DAPL1A0PJW8 107 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 TCAPO15273 167 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 SSNA1O43805 119 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 TCRBP04435 133 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 RPS12P25398 132 aaKnown RBP3.68□□□□□ -1.82
VRK1-203ENST00000555067 RBMXP38159 391 aaKnown RBP3.68□□□□□ -1.82
VRK1-203ENST00000555067 IFNGR2P38484 337 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 CXCR4P61073 352 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 HERVK_113P61574 105 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 LYZP61626 148 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 FAM53BQ14153 422 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 HERPUD1Q15011 391 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 MARC1Q5VT66 337 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 SYPL2Q5VXT5 272 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 KCTD16Q68DU8 428 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 XKRXQ6PP77 449 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 ACP7Q6ZNF0 438 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 CPNE9Q8IYJ1 553 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 CEND1Q8N111 149 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 CCNYL1Q8N7R7 359 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 OR1S1Q8NH92 325 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 RXFP4Q8TDU9 374 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 CASTOR1Q8WTX7 329 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 TMEM159Q96B96 161 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 DGCR14Q96DF8 476 aaKnown RBP3.68□□□□□ -1.82
VRK1-203ENST00000555067 SMARCD1Q96GM5 515 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 BIRC8Q96P09 236 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 OR2M4Q96R27 311 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 STACQ99469 402 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 PITX2Q99697 317 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 SELENOSQ9BQE4 189 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 TMEM243Q9BU79 118 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 DEFB126Q9BYW3 111 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 FAM206AQ9NX38 181 aa3.68□□□□□ -1.82
VRK1-203ENST00000555067 PSPHP1O15172 72 aa3.67□□□□□ -1.82
VRK1-203ENST00000555067 ENTPD6O75354 484 aa3.67□□□□□ -1.82
VRK1-203ENST00000555067 SPAG7O75391 227 aa3.67□□□□□ -1.82
VRK1-203ENST00000555067 DHRS3O75911 302 aa3.67□□□□□ -1.82
VRK1-203ENST00000555067 ISG15P05161 165 aa3.67□□□□□ -1.82
VRK1-203ENST00000555067 GIG44P09565 113 aaPredicted RBP3.67□□□□□ -1.82
VRK1-203ENST00000555067 ZDHHC11BP0C7U3 371 aa3.67□□□□□ -1.82
VRK1-203ENST00000555067 KLK2P20151 261 aa3.67□□□□□ -1.82
VRK1-203ENST00000555067 TAC1P20366 129 aa3.67□□□□□ -1.82
VRK1-203ENST00000555067 CYB561P49447 251 aa3.67□□□□□ -1.82
VRK1-203ENST00000555067 PPOXP50336 477 aa3.67□□□□□ -1.82
VRK1-203ENST00000555067 RAP1GDS1P52306 607 aa3.67□□□□□ -1.82
VRK1-203ENST00000555067 SYNJ2BPP57105 145 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms