RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 PSG2P11465 335 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 GLRA1P23415 457 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 CFL1P23528 166 aaKnown RBP3.81□□□□□ -1.8
ATXN3-229ENST00000554672 OTX1P32242 354 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-229ENST00000554672 GPR4P46093 362 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 ENTPD1P49961 510 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 CAPZA1P52907 286 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 RPL23AP62750 156 aaKnown RBP3.81□□□□□ -1.8
ATXN3-229ENST00000554672 SELENOWP63302 87 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 FAM3AP98173 230 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 SLC34A1Q06495 639 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 SEC23BQ15437 767 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 TAF13Q15543 124 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 SRSF7Q16629 238 aaKnown RBP eCLIP3.81□□□□□ -1.8
ATXN3-229ENST00000554672 CYBRD1Q53TN4 286 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 C9orf66Q5T8R8 295 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 MINOS1Q5TGZ0 78 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 AGBL2Q5U5Z8 902 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 ZNF626Q68DY1 528 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 ZNF770Q6IQ21 691 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-229ENST00000554672 TBPL2Q6SJ96 375 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 C10orf99Q6UWK7 81 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 SLC16A9Q7RTY1 509 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 DHDDSQ86SQ9 333 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 SBSPONQ8IVN8 264 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 OFCC1Q8IZS5 231 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 OSR2Q8N2R0 312 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 FTMTQ8N4E7 242 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 ANKRD42Q8N9B4 389 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 CSNK2A3Q8NEV1 391 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 OR2T27Q8NH04 317 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 ZNF671Q8TAW3 534 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 RPL3LQ92901 407 aaKnown RBP3.81□□□□□ -1.8
ATXN3-229ENST00000554672 STMN2Q93045 179 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 SGK3Q96BR1 496 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 LRGUKQ96M69 825 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 C7orf26Q96N11 449 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 SH3GL1Q99961 368 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 CCDC28BQ9BUN5 200 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 RTL8AQ9BWD3 113 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 NSRP1Q9H0G5 558 aaKnown RBP3.81□□□□□ -1.8
ATXN3-229ENST00000554672 SP140LQ9H930 580 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 VIPAS39Q9H9C1 493 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 ELL3Q9HB65 397 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-229ENST00000554672 C19orf12Q9NSK7 152 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 SIGLEC7Q9Y286 467 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 TMEM5Q9Y2B1 443 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 RHBDD3Q9Y3P4 386 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 N6AMT1Q9Y5N5 214 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 MPC1Q9Y5U8 109 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 MINOS1-NBL1R4GNA1 71 aa3.81□□□□□ -1.8
ATXN3-229ENST00000554672 TMEM120BA0PK00 339 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 PSMB11A5LHX3 300 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 ZNF785A8K8V0 405 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 C17orf98A8MV24 154 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 ODF3BA8MYP8 253 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 M0QZK8 103 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 CCL24O00175 119 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 FFAR1O14842 300 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 ARPC3O15145 178 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 MTRF1O75570 445 aaKnown RBP3.8□□□□□ -1.8
ATXN3-229ENST00000554672 HNRNPCP07910 306 aaKnown RBP eCLIP3.8□□□□□ -1.8
ATXN3-229ENST00000554672 PGA5P0DJD9 388 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 CCL3L1P16619 93 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 PRDX2P32119 198 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 BRS3P32247 399 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 KDELR2P33947 212 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 YAP1P46937 504 aaKnown RBP3.8□□□□□ -1.8
ATXN3-229ENST00000554672 PRKXP51817 358 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 DYNC1I2Q13409 638 aaKnown RBP3.8□□□□□ -1.8
ATXN3-229ENST00000554672 IL18R1Q13478 541 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 CYLC2Q14093 348 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-229ENST00000554672 TIGD6Q17RP2 521 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 ABCA11PQ4W5N1 156 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 LDLRAD2Q5SZI1 272 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 LCN8Q6JVE9 175 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 NANOGP8Q6NSW7 305 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 PLBD1Q6P4A8 553 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 ERICH5Q6P6B1 374 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 ADAMTSL5Q6ZMM2 481 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 ZNF66Q6ZN08 573 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 OR2W3Q7Z3T1 314 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 ZNF695Q8IW36 515 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 ZNF561Q8N587 486 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 COMMD1Q8N668 190 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 OR4M1Q8NGD0 313 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 OR4K13Q8NH42 304 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 OR5P3Q8WZ94 311 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 REEP6Q96HR9 211 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 TPD52L3Q96J77 140 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 RNF170Q96K19 258 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 HIST1H2AAQ96QV6 131 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 NMNAT3Q96T66 252 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 COPS4Q9BT78 406 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 ALG8Q9BVK2 526 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 C1orf43Q9BWL3 253 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 PAPOLGQ9BWT3 736 aaKnown RBP3.8□□□□□ -1.8
ATXN3-229ENST00000554672 C1orf21Q9H246 121 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 ANKRD19PQ9H560 264 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 PPP1R3EQ9H7J1 279 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms