RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 AIG1Q9NVV5 245 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 TAS2R13Q9NYV9 303 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 DNAJC27Q9NZQ0 273 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 COMMD9Q9P000 198 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 ANXA10Q9UJ72 324 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 RAB22AQ9UL26 194 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 SIGLEC9Q9Y336 463 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 CACNG2Q9Y698 323 aa3.26□□□□□ -1.89
SCFD1-211ENST00000554437 NUP153P49790 1475 aaKnown RBP3.26□□□□□ -1.89
SCFD1-211ENST00000554437 MN1Q10571 1320 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-211ENST00000554437 F5H5K5 113 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 LINC01619G3V211 115 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 H7C417 338 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 TRAF3IP2O43734 574 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-211ENST00000554437 NPIPB7O75200 414 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 ZNF780AO75290 641 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-211ENST00000554437 CTDNEP1O95476 244 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 KLF8O95600 359 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-211ENST00000554437 PRB2P02812 416 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-211ENST00000554437 IFNA16P05015 189 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 IL6P05231 212 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 BCHEP06276 602 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 RAB3BP20337 219 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 PSMA1P25786 263 aaKnown RBP3.25□□□□□ -1.89
SCFD1-211ENST00000554437 NUDT1P36639 197 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 OMPP47874 163 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 IDH3GP51553 393 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-211ENST00000554437 MTPNP58546 118 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 TCP10Q12799 353 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 SRSF6Q13247 344 aaKnown RBP3.25□□□□□ -1.89
SCFD1-211ENST00000554437 KIAA0087Q14695 138 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 TOMM34Q15785 309 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-211ENST00000554437 SPIN3Q5JUX0 258 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 TEX43Q6ZNM6 134 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 FAM92BQ6ZTR7 304 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 OR10AD1Q8NGE0 317 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 FAM151AQ8WW52 585 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 UCN3Q969E3 161 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 FAM104AQ969W3 186 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 TLCD1Q96CP7 247 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 EBNA1BP2Q99848 306 aaKnown RBP3.25□□□□□ -1.89
SCFD1-211ENST00000554437 GABARAPL3Q9BY60 117 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 SLC25A39Q9BZJ4 359 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-211ENST00000554437 SLIRPQ9GZT3 109 aaKnown RBP3.25□□□□□ -1.89
SCFD1-211ENST00000554437 DEFB127Q9H1M4 99 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 C12orf4Q9NQ89 552 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 FAM206AQ9NX38 181 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 MTFP1Q9UDX5 166 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 OPN4Q9UHM6 478 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 TRMT112Q9UI30 125 aaKnown RBP3.25□□□□□ -1.89
SCFD1-211ENST00000554437 CD84Q9UIB8 345 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 SNX10Q9Y5X0 201 aa3.25□□□□□ -1.89
SCFD1-211ENST00000554437 MRPS18BQ9Y676 258 aaKnown RBP3.25□□□□□ -1.89
SCFD1-211ENST00000554437 IGHV3OR16-9A0A0B4J2B5 98 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 DAPL1A0PJW8 107 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 CEACAM18A8MTB9 384 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 H0YJX3 145 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 AZIN1O14977 448 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 TCAPO15273 167 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 ENTPD6O75354 484 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 DCTN3O75935 186 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 SLC22A5O76082 557 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 GLSO94925 669 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-211ENST00000554437 KRT75O95678 551 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 SLC25A27O95847 323 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 INSP01308 110 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 CD74P04233 296 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 IGKV3-11P04433 115 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 IGHV4-34P06331 123 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 OR4E1P0C645 316 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 ZNF32P17041 273 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 DTYMKP23919 212 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 RPS12P25398 132 aaKnown RBP3.24□□□□□ -1.89
SCFD1-211ENST00000554437 PSMB9P28065 219 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 GGT2P36268 569 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 IFNGR2P38484 337 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 TTPAP49638 278 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 RPS23P62266 143 aaKnown RBP3.24□□□□□ -1.89
SCFD1-211ENST00000554437 CACNG7P62955 275 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 SPA17Q15506 151 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 HLA-DRB5Q30154 266 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 CDNFQ49AH0 187 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 CST9Q5W186 159 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 CYB5R2Q6BCY4 276 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 Q6P435 159 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 NT5DC3Q86UY8 548 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 CALHM1Q8IU99 346 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 CPNE9Q8IYJ1 553 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 RIBC1Q8N443 379 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-211ENST00000554437 OR6N1Q8NGY5 312 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 OR2G3Q8NGZ4 309 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 STOML3Q8TAV4 291 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 TEX47Q8TBZ9 253 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 DTD1Q8TEA8 209 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 RGP1Q92546 391 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-211ENST00000554437 AP3S1Q92572 193 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 RPUSD4Q96CM3 377 aaKnown RBP3.24□□□□□ -1.89
SCFD1-211ENST00000554437 DNAJC19Q96DA6 116 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 PGLYRP3Q96LB9 341 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 FAM19A4Q96LR4 140 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms