RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 CAV2P51636 162 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 EFNB2P52799 333 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 PNLIPRP2P54317 469 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 GFERP55789 205 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 ID2Q02363 134 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 OC90Q02509 493 aaPredicted RBP5.17□□□□□ -1.58
VPS33B-203ENST00000554264 COL10A1Q03692 680 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 FOXI1Q12951 378 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 CHAF1BQ13112 559 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 PPP1R1AQ13522 171 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 EIF2B1Q14232 305 aaKnown RBP5.17□□□□□ -1.58
VPS33B-203ENST00000554264 SMCO1Q147U7 214 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 PEA15Q15121 130 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 C2orf68Q2NKX9 166 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 SCGB2B2Q4G0G5 96 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 OPN5Q6U736 354 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 HIST2H3AQ71DI3 136 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 GRINAQ7Z429 371 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 TRAPPC6BQ86SZ2 158 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 NAA40Q86UY6 237 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.17□□□□□ -1.58
VPS33B-203ENST00000554264 PUSL1Q8N0Z8 303 aaKnown RBP5.17□□□□□ -1.58
VPS33B-203ENST00000554264 JAGN1Q8N5M9 183 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 ZBTB34Q8NCN2 500 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 LFNGQ8NES3 379 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 OR56B1Q8NGI3 324 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 OR4D10Q8NGI6 311 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 OR1S2Q8NGQ3 325 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 OR13C8Q8NGS7 320 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 OR8S1Q8NH09 359 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 TERB2Q8NHR7 220 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 KCNG3Q8TAE7 436 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 NUDCD2Q8WVJ2 157 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 ZNRF4Q8WWF5 429 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 LINC00476Q8WZB0 136 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 ST8SIA1Q92185 356 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 DCUN1D4Q92564 292 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 C8orf44Q96CB5 159 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 SNRNP40Q96DI7 357 aaKnown RBP5.17□□□□□ -1.58
VPS33B-203ENST00000554264 ARSGQ96EG1 525 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 ZDHHC12Q96GR4 267 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 MOGAT1Q96PD6 335 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 TGM7Q96PF1 710 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 C12orf57Q99622 126 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 NRTNQ99748 197 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 SLC6A7Q99884 636 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 ZNF251Q9BRH9 671 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 URM1Q9BTM9 101 aaKnown RBP5.17□□□□□ -1.58
VPS33B-203ENST00000554264 TINAGL1Q9GZM7 467 aaPredicted RBP5.17□□□□□ -1.58
VPS33B-203ENST00000554264 EGLN1Q9GZT9 426 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 CST11Q9H112 138 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 SAV1Q9H4B6 383 aaPredicted RBP5.17□□□□□ -1.58
VPS33B-203ENST00000554264 PLEKHA2Q9HB19 425 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 GPR35Q9HC97 309 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 FANCFQ9NPI8 374 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 UQCC1Q9NVA1 299 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 LUZP4Q9P127 313 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 CTSFQ9UBX1 484 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 OR52A1Q9UKL2 312 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 RARRES3Q9UL19 164 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 ZNF346Q9UL40 294 aaKnown RBP5.17□□□□□ -1.58
VPS33B-203ENST00000554264 C2CD3Q4AC94 2353 aa5.17□□□□□ -1.58
VPS33B-203ENST00000554264 UTP20O75691 2785 aaKnown RBP5.17□□□□□ -1.58
VPS33B-203ENST00000554264 MED13Q9UHV7 2174 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 RP1L1Q8IWN7 2480 aaPredicted RBP5.16□□□□□ -1.58
VPS33B-203ENST00000554264 LOC107986453A0A1B0GWG9 222 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 C5orf51A6NDU8 294 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 FAM74A7A6NL05 159 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 SERPINE3A8MV23 424 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 IDSB3KWA1 339 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 RAB27BO00194 218 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 HCRTR1O43613 425 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 NPIPB7O75200 414 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 SRSF10O75494 262 aaKnown RBP5.16□□□□□ -1.58
VPS33B-203ENST00000554264 MT-ND4LP03901 98 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 S100A6P06703 90 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 PRF1P14222 555 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 CAPZBP47756 277 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 CCR4P51679 360 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 SUCLG1P53597 346 aaKnown RBP5.16□□□□□ -1.58
VPS33B-203ENST00000554264 ATP1B3P54709 279 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 DVL1P1P54792 670 aaPredicted RBP5.16□□□□□ -1.58
VPS33B-203ENST00000554264 SLC26A5P58743 744 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 CD81P60033 236 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 RAB1AP62820 205 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 FAM3AP98173 230 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 ACY1Q03154 408 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 EGR4Q05215 589 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 HABP2Q14520 560 aaPredicted RBP5.16□□□□□ -1.58
VPS33B-203ENST00000554264 ACKR1Q16570 336 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 GFOD2Q3B7J2 385 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 CD300EQ496F6 205 aaPredicted RBP5.16□□□□□ -1.58
VPS33B-203ENST00000554264 FAM74A3Q4VXF1 159 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 FAM76BQ5HYJ3 339 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 FJX1Q86VR8 437 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 LYPD6Q86Y78 171 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 ZNF561Q8N587 486 aa5.16□□□□□ -1.58
VPS33B-203ENST00000554264 RBMXL3Q8N7X1 1067 aaKnown RBP5.16□□□□□ -1.58
VPS33B-203ENST00000554264 PNLDC1Q8NA58 520 aaKnown RBP5.16□□□□□ -1.58
VPS33B-203ENST00000554264 RELL2Q8NC24 303 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms