RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 MRPS18AQ9NVS2 196 aaKnown RBP5.41□□□□□ -1.54
SLIRP-203ENST00000554074 ENPP5Q9UJA9 477 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 SF3B6Q9Y3B4 125 aaKnown RBP5.41□□□□□ -1.54
SLIRP-203ENST00000554074 RPL36Q9Y3U8 105 aaKnown RBP5.41□□□□□ -1.54
SLIRP-203ENST00000554074 MAB21L2Q9Y586 359 aa5.41□□□□□ -1.54
SLIRP-203ENST00000554074 CMYA5Q8N3K9 4069 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 A0A1W2PPH5 198 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 A0A1W2PQ09 198 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 PRR32B1ATL7 298 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 J3QT63 122 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 PAHP00439 452 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 NRASP01111 189 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 TTRP02766 147 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 OR2T7P0C7T2 308 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 PGA5P0DJD9 388 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 NDUFB7P17568 137 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 GABRB1P18505 474 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 MPZP25189 248 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 SAA4P35542 130 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 GABRA2P47869 451 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 HCCSP53701 268 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 CXCR4P61073 352 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 ACTC1P68032 377 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 ACTA1P68133 377 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 EGR3Q06889 387 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 RAB40BQ12829 278 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 SMIM21Q3B7S5 101 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 KLHL22Q53GT1 634 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 CEP78Q5JTW2 689 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 ZNF684Q5T5D7 378 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 ASPHD2Q6ICH7 369 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 HCP5Q6MZN7 132 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 C11orf88Q6PI97 169 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 HAGHLQ6PII5 290 aaPredicted RBP5.4□□□□□ -1.54
SLIRP-203ENST00000554074 ZNF322Q6U7Q0 402 aaPredicted RBP5.4□□□□□ -1.54
SLIRP-203ENST00000554074 ACP7Q6ZNF0 438 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 MOB3CQ70IA8 216 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 KCTD20Q7Z5Y7 419 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 ZNF573Q86YE8 665 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 CALHM1Q8IU99 346 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 PDZD9Q8IXQ8 264 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 ELMOD2Q8IZ81 293 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 C8orf59Q8N0T1 100 aaPredicted RBP5.4□□□□□ -1.54
SLIRP-203ENST00000554074 ZNF561Q8N587 486 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 DTX3Q8N9I9 347 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 ZNRF1Q8ND25 227 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 CCDC54Q8NEL0 328 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 OR2T27Q8NH04 317 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 OR51E1Q8TCB6 317 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 CYGBQ8WWM9 190 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 FAM234AQ9H0X4 552 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 MEGF9Q9H1U4 602 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 ADGRL4Q9HBW9 690 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 PLA2G2EQ9NZK7 142 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 FBLN5Q9UBX5 448 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 RAB26Q9ULW5 256 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 COPS3Q9UNS2 423 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 PIGLQ9Y2B2 252 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 POLDIP2Q9Y2S7 368 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 R4GMQ9 66 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 V9GYS6 101 aa5.4□□□□□ -1.54
SLIRP-203ENST00000554074 A0A1B0GTI1 187 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 hCG_1809904A0A1W2PP81 198 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 A0A1W2PPE2 198 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 A0A1W2PR64 198 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 A0A1W2PRV1 198 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 PQLC2LA1A4F0 135 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 MEIOCA2RUB1 952 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 ZNF670-ZNF695F2Z2N8 137 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 LOC110117498-PIK3R3F6TDL0 507 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 PSMD9O00233 223 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 SLC1A7O00341 560 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 SULT1C4O75897 302 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 FADS2O95864 444 aaKnown RBP5.39□□□□□ -1.55
SLIRP-203ENST00000554074 MRPL3P09001 348 aaKnown RBP5.39□□□□□ -1.55
SLIRP-203ENST00000554074 FAHP16930 419 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 CCL1P22362 96 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 ATP6V1E1P36543 226 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 KRTAP10-3P60369 221 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 GMFBP60983 142 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 ISL1P61371 349 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 ERVK11-1P61568 191 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 RPL31P62899 125 aaKnown RBP5.39□□□□□ -1.55
SLIRP-203ENST00000554074 DEFA6Q01524 100 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 SRSF4Q08170 494 aaKnown RBP5.39□□□□□ -1.55
SLIRP-203ENST00000554074 MFGE8Q08431 387 aaPredicted RBP5.39□□□□□ -1.55
SLIRP-203ENST00000554074 MRPL28Q13084 256 aaKnown RBP5.39□□□□□ -1.55
SLIRP-203ENST00000554074 KLRD1Q13241 179 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 MED21Q13503 144 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 CLVS2Q5SYC1 327 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 BCL2L15Q5TBC7 163 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 PLCXD3Q63HM9 321 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 LIAT1Q6ZQX7 453 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 COMMD2Q86X83 199 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 SLC35F2Q8IXU6 374 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 ENTHD1Q8IYW4 607 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 C11orf42Q8N5U0 333 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 CD177Q8N6Q3 437 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 TMEM185AQ8NFB2 350 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 OR14K1Q8NGZ2 314 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms