RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 CD300LBA8K4G0 201 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 SOCS1O15524 211 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 SSX5O60225 188 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 HTR3BO95264 441 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 RLN1P04808 185 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 ACAA1P09110 424 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-221ENST00000553498 RAC2P15153 192 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 ZNF14P17017 642 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-221ENST00000553498 HLA-GP17693 338 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 ATF4P18848 351 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-221ENST00000553498 ANXA7P20073 488 aaKnown RBP6.29□□□□□ -1.4
ATXN3-221ENST00000553498 SERPINA2P20848 420 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 CCNOP22674 350 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 ANOS1P23352 680 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 TIMP3P35625 211 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 RAD52P43351 418 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 KIR2DL2P43627 348 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-221ENST00000553498 OR3A3P47888 321 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 UCNP55089 124 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 GNG3P63215 75 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 PMP22Q01453 160 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 FGL1Q08830 312 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 PRDX4Q13162 271 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 MPV17LQ2QL34 196 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 C4orf46Q504U0 113 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 HIKESHIQ53FT3 197 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 C1QL2Q7Z5L3 287 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 MDP1Q86V88 176 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 SLC25A42Q86VD7 318 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 Q8IYB0 196 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 OR5AP2Q8NGF4 316 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 OR56B2PQ8NGI1 322 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 OR4D10Q8NGI6 311 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 OR5H2Q8NGV7 314 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 OR51F2Q8NH61 342 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 TERB2Q8NHR7 220 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 NPRL2Q8WTW4 380 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 NUDCD2Q8WVJ2 157 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 PIGCQ92535 297 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 GTF3AQ92664 365 aaKnown RBP6.29□□□□□ -1.4
ATXN3-221ENST00000553498 WBP1Q96G27 269 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 ARHGAP5-AS1Q96IT6 56 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 ZNF75AQ96N20 296 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 TAAR6Q96RI8 345 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 NICN1Q9BSH3 213 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 PAPOLGQ9BWT3 736 aaKnown RBP6.29□□□□□ -1.4
ATXN3-221ENST00000553498 PKIBQ9C010 78 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 TINAGL1Q9GZM7 467 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-221ENST00000553498 RIMS4Q9H426 269 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-221ENST00000553498 BANF2Q9H503 90 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 ZMAT3Q9HA38 289 aaKnown RBP6.29□□□□□ -1.4
ATXN3-221ENST00000553498 CDH20Q9HBT6 801 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 PLEKHJ1Q9NW61 149 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 MYEF2Q9P2K5 600 aaKnown RBP6.29□□□□□ -1.4
ATXN3-221ENST00000553498 ZNF69Q9UC07 566 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 ZNF222Q9UK12 451 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 POU2F3Q9UKI9 436 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 PROCRQ9UNN8 238 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 FLVCR2Q9UPI3 526 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 AMDHD2Q9Y303 409 aa6.29□□□□□ -1.4
ATXN3-221ENST00000553498 IGKV1-27A0A075B6S5 117 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 A0A0B4J2A0 478 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 MEIS3P1A6NDR6 274 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 TMEM210A6NLX4 147 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 ZNF850A8MQ14 1090 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 A8MV72 311 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-221ENST00000553498 FABP7O15540 132 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 PDCD6O75340 191 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 IGKV3-15P01624 115 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 HPXP02790 462 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 OR4E1P0C645 316 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 AMY2BP19961 511 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 FUT3P21217 361 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 IGHV1-2P23083 117 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 FPR2P25090 351 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 CHATP28329 748 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 HRH1P35367 487 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 FOXG1P55316 489 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-221ENST00000553498 PER3P56645 1201 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 RBM11P57052 281 aaKnown RBP6.28□□□□□ -1.4
ATXN3-221ENST00000553498 GMFBP60983 142 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 FGF12P61328 243 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 DHODHQ02127 395 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 SRSF4Q08170 494 aaKnown RBP6.28□□□□□ -1.4
ATXN3-221ENST00000553498 MZT1Q08AG7 82 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 IL24Q13007 206 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 PLEKHN1Q494U1 663 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-221ENST00000553498 CHRFAM7AQ494W8 412 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 SCGB2B2Q4G0G5 96 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 ATPAF1Q5TC12 328 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-221ENST00000553498 C9orf135Q5VTT2 229 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 TMEM211Q6ICI0 200 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 LIN54Q6MZP7 749 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 FAAP20Q6NZ36 180 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 FAM180AQ6UWF9 173 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 Q6ZS49 121 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 OVCH2Q7RTZ1 564 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 LHFPL1Q86WI0 220 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 ZNF611Q8N823 705 aa6.28□□□□□ -1.4
ATXN3-221ENST00000553498 ASCC1Q8N9N2 400 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms