RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 RAB11FIP2Q7L804 512 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 SGPP2Q8IWX5 399 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 BAP18Q8IXM2 172 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 ESX1Q8N693 406 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 CT55Q8WUE5 264 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 SPSB4Q96A44 273 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 RNF126Q9BV68 326 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 PRDM14Q9GZV8 571 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 METTL8Q9H825 291 aaKnown RBP11.23□□□□□ -0.61
SHMT2-205ENST00000553474 GPR173Q9NS66 373 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 ZNF701Q9NV72 531 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-205ENST00000553474 P4HTMQ9NXG6 502 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 TAS2R3Q9NYW6 316 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 SLC7A11Q9UPY5 501 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 hCG_38984A0A1B0GV85 526 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 TERTO14746 1132 aaKnown RBP11.23□□□□□ -0.61
SHMT2-205ENST00000553474 JMJD7P0C870 316 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 GDF1P27539 372 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 RBMXP38159 391 aaKnown RBP11.23□□□□□ -0.61
SHMT2-205ENST00000553474 PSG4Q00888 419 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 FOXC1Q12948 553 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 ATXN7L3Q14CW9 347 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-205ENST00000553474 EIF5AL1Q6IS14 154 aaKnown RBP11.23□□□□□ -0.61
SHMT2-205ENST00000553474 DHRS11Q6UWP2 260 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 RNF141Q8WVD5 230 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 FAM173AQ9BQD7 235 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 GPR87Q9BY21 358 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 BCO1Q9HAY6 547 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 GPR35Q9HC97 309 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 NECAP2Q9NVZ3 263 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 PARPBPQ9NWS1 579 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 B4GALT7Q9UBV7 327 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 GPR160Q9UJ42 338 aa11.23□□□□□ -0.61
SHMT2-205ENST00000553474 RTTNQ86VV8 2226 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 A0A0G2JMM0 328 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 A0A1W2PPB8 328 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 A0A1W2PRS3 328 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 FAM90A10PA6NDY2 464 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 FAM90A18PA6NE21 464 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 FAM90A16PA6NEW6 464 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 FAM90A20PA6NIJ5 464 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 FAM90A8PA6NJQ4 464 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 FAM90A7PA6NKC0 464 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 FAM90A22PA8MWA6 464 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 KIR3DP1A8MWS1 328 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 FAM90A12PA8MX19 464 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 FAM90A5PA8MXJ8 464 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 FAM90A23PA8MXZ1 464 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 C21orf140B9A014 251 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 TRAPPC6AO75865 159 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 SCO1O75880 301 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 HTR3BO95264 441 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 FAM90A15PP0C7V4 464 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 FAM90A13PP0C7W8 464 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 FAM90A14PP0C7W9 464 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 FAM90A24PP0C7X0 464 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 B4GALT1P15291 398 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 GABRR1P24046 479 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 SLC9A3R2Q15599 337 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 CEACAM16Q2WEN9 425 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 ANKRD55Q3KP44 614 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 TFAP2EQ6VUC0 442 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 C6orf201Q7Z4U5 140 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 SPERTQ8NA61 448 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 POC1AQ8NBT0 407 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 RELL2Q8NC24 303 aaPredicted RBP11.22□□□□□ -0.61
SHMT2-205ENST00000553474 LHFPL5Q8TAF8 219 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 ZNF75AQ96N20 296 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 ALKBH3Q96Q83 286 aaPredicted RBP11.22□□□□□ -0.61
SHMT2-205ENST00000553474 DMRTA2Q96SC8 542 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 C1QTNF5Q9BXJ0 243 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 SPRY4Q9C004 299 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 TMEM100Q9NV29 134 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 ABI3Q9P2A4 366 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 MCTS1Q9ULC4 181 aaKnown RBP11.22□□□□□ -0.61
SHMT2-205ENST00000553474 DOCK10Q96BY6 2186 aa11.22□□□□□ -0.61
SHMT2-205ENST00000553474 ZNF816-ZNF321PA0A0X1KG74 233 aa11.21□□□□□ -0.61
SHMT2-205ENST00000553474 LOC105371267A0A1B0GV96 52 aa11.21□□□□□ -0.61
SHMT2-205ENST00000553474 CRYM-AS1A6NIL9 109 aa11.21□□□□□ -0.61
SHMT2-205ENST00000553474 RPL36A-HNRNPH2H7BZ11 118 aa11.21□□□□□ -0.61
SHMT2-205ENST00000553474 SDCBPO00560 298 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-205ENST00000553474 RFPL3SP0C7P2 107 aa11.21□□□□□ -0.61
SHMT2-205ENST00000553474 COX5BP10606 129 aa11.21□□□□□ -0.61
SHMT2-205ENST00000553474 GLRA1P23415 457 aa11.21□□□□□ -0.61
SHMT2-205ENST00000553474 CHATP28329 748 aa11.21□□□□□ -0.61
SHMT2-205ENST00000553474 NTF4P34130 210 aa11.21□□□□□ -0.61
SHMT2-205ENST00000553474 FOXO1Q12778 655 aa11.21□□□□□ -0.61
SHMT2-205ENST00000553474 AIMP2Q13155 320 aaKnown RBP11.21□□□□□ -0.61
SHMT2-205ENST00000553474 WIPI1Q5MNZ9 446 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-205ENST00000553474 ELP2Q6IA86 826 aa11.21□□□□□ -0.61
SHMT2-205ENST00000553474 DTX1Q86Y01 620 aa11.21□□□□□ -0.61
SHMT2-205ENST00000553474 OSR2Q8N2R0 312 aa11.21□□□□□ -0.61
SHMT2-205ENST00000553474 OR2AE1Q8NHA4 323 aa11.21□□□□□ -0.61
SHMT2-205ENST00000553474 PSMF1Q92530 271 aa11.21□□□□□ -0.61
SHMT2-205ENST00000553474 MARC2Q969Z3 335 aa11.21□□□□□ -0.61
SHMT2-205ENST00000553474 GALNT14Q96FL9 552 aa11.21□□□□□ -0.61
SHMT2-205ENST00000553474 CMSS1Q9BQ75 279 aaKnown RBP11.21□□□□□ -0.61
SHMT2-205ENST00000553474 ZNF2Q9BSG1 426 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-205ENST00000553474 C1QTNF6Q9BXI9 259 aa11.21□□□□□ -0.61
SHMT2-205ENST00000553474 WNT5BQ9H1J7 359 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms