RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 GATBO75879 557 aaKnown RBP15.85■□□□□ 0.13
PTCH1-227ENST00000553256 TOX4O94842 621 aa15.85■□□□□ 0.13
PTCH1-227ENST00000553256 MT-ND2P03891 347 aa15.85■□□□□ 0.13
PTCH1-227ENST00000553256 GNAO1P09471 354 aa15.85■□□□□ 0.13
PTCH1-227ENST00000553256 ETV1P50549 477 aa15.85■□□□□ 0.13
PTCH1-227ENST00000553256 KLHL22Q53GT1 634 aa15.85■□□□□ 0.13
PTCH1-227ENST00000553256 LRRC10Q5BKY1 277 aa15.85■□□□□ 0.13
PTCH1-227ENST00000553256 XAF1Q6GPH4 301 aa15.85■□□□□ 0.13
PTCH1-227ENST00000553256 METAP1DQ6UB28 335 aaPredicted RBP15.85■□□□□ 0.13
PTCH1-227ENST00000553256 BRD3OSQ6XYD6 125 aa15.85■□□□□ 0.13
PTCH1-227ENST00000553256 TRMT10AQ8TBZ6 339 aaKnown RBP15.85■□□□□ 0.13
PTCH1-227ENST00000553256 JMJD8Q96S16 334 aa15.85■□□□□ 0.13
PTCH1-227ENST00000553256 PCGF1Q9BSM1 259 aa15.85■□□□□ 0.13
PTCH1-227ENST00000553256 ADI1Q9BV57 179 aa15.85■□□□□ 0.13
PTCH1-227ENST00000553256 UNKLQ9H9P5 680 aaKnown RBP15.85■□□□□ 0.13
PTCH1-227ENST00000553256 PLEKHA1Q9HB21 404 aa15.85■□□□□ 0.13
PTCH1-227ENST00000553256 HHLA2Q9UM44 414 aa15.85■□□□□ 0.13
PTCH1-227ENST00000553256 POLDIP2Q9Y2S7 368 aa15.85■□□□□ 0.13
PTCH1-227ENST00000553256 MDFIC2A0A1B0GVS7 189 aa15.84■□□□□ 0.13
PTCH1-227ENST00000553256 TMEM89A2RUT3 159 aa15.84■□□□□ 0.13
PTCH1-227ENST00000553256 DNAJC9-AS1A6NH13 148 aa15.84■□□□□ 0.13
PTCH1-227ENST00000553256 NKX6-3A6NJ46 265 aa15.84■□□□□ 0.13
PTCH1-227ENST00000553256 H0YAE9 185 aa15.84■□□□□ 0.13
PTCH1-227ENST00000553256 ATF1P18846 271 aa15.84■□□□□ 0.13
PTCH1-227ENST00000553256 DCKP27707 260 aa15.84■□□□□ 0.13
PTCH1-227ENST00000553256 PRDX2P32119 198 aa15.84■□□□□ 0.13
PTCH1-227ENST00000553256 MRPL28Q13084 256 aaKnown RBP15.84■□□□□ 0.13
PTCH1-227ENST00000553256 IL18R1Q13478 541 aa15.84■□□□□ 0.13
PTCH1-227ENST00000553256 SMIM21Q3B7S5 101 aa15.84■□□□□ 0.13
PTCH1-227ENST00000553256 RUSC1-AS1Q66K80 236 aa15.84■□□□□ 0.13
PTCH1-227ENST00000553256 ZNF529Q6P280 563 aa15.84■□□□□ 0.13
PTCH1-227ENST00000553256 C1orf122Q6ZSJ8 110 aa15.84■□□□□ 0.13
PTCH1-227ENST00000553256 DHRSXQ8N5I4 330 aa15.84■□□□□ 0.13
PTCH1-227ENST00000553256 C11orf42Q8N5U0 333 aa15.84■□□□□ 0.13
PTCH1-227ENST00000553256 NPRL2Q8WTW4 380 aa15.84■□□□□ 0.13
PTCH1-227ENST00000553256 FGGYQ96C11 551 aa15.84■□□□□ 0.13
PTCH1-227ENST00000553256 MS4A7Q9GZW8 240 aaPredicted RBP15.84■□□□□ 0.13
PTCH1-227ENST00000553256 SEBOXQ9HB31 216 aaPredicted RBP15.84■□□□□ 0.13
PTCH1-227ENST00000553256 ELL3Q9HB65 397 aaPredicted RBP15.84■□□□□ 0.13
PTCH1-227ENST00000553256 DIMT1Q9UNQ2 313 aaKnown RBP15.84■□□□□ 0.13
PTCH1-227ENST00000553256 HSPE1-MOB4S4R3N1 261 aa15.84■□□□□ 0.13
PTCH1-227ENST00000553256 FAM230AA0A1W2PPH8 454 aa15.83■□□□□ 0.12
PTCH1-227ENST00000553256 ZNF737O75373 536 aa15.83■□□□□ 0.12
PTCH1-227ENST00000553256 ALX3O95076 343 aa15.83■□□□□ 0.12
PTCH1-227ENST00000553256 PRTN3P24158 256 aa15.83■□□□□ 0.12
PTCH1-227ENST00000553256 CEBPDP49716 269 aaPredicted RBP15.83■□□□□ 0.12
PTCH1-227ENST00000553256 GTF2A1P52655 376 aaPredicted RBP15.83■□□□□ 0.12
PTCH1-227ENST00000553256 GABPB1Q06547 395 aaPredicted RBP15.83■□□□□ 0.12
PTCH1-227ENST00000553256 DOC2BQ14184 412 aa15.83■□□□□ 0.12
PTCH1-227ENST00000553256 PDCD1Q15116 288 aa15.83■□□□□ 0.12
PTCH1-227ENST00000553256 SLC9A3R2Q15599 337 aa15.83■□□□□ 0.12
PTCH1-227ENST00000553256 DEFB112Q30KQ8 113 aa15.83■□□□□ 0.12
PTCH1-227ENST00000553256 METTL11BQ5VVY1 283 aa15.83■□□□□ 0.12
PTCH1-227ENST00000553256 HCP5Q6MZN7 132 aa15.83■□□□□ 0.12
PTCH1-227ENST00000553256 PIP4P2Q8N4L2 257 aa15.83■□□□□ 0.12
PTCH1-227ENST00000553256 PARP16Q8N5Y8 322 aa15.83■□□□□ 0.12
PTCH1-227ENST00000553256 CYGBQ8WWM9 190 aa15.83■□□□□ 0.12
PTCH1-227ENST00000553256 TFAP2CQ92754 450 aa15.83■□□□□ 0.12
PTCH1-227ENST00000553256 SLC7A11Q9UPY5 501 aa15.83■□□□□ 0.12
PTCH1-227ENST00000553256 SIRT4Q9Y6E7 314 aaPredicted RBP15.83■□□□□ 0.12
PTCH1-227ENST00000553256 IGHV1-69DA0A0B4J2H0 117 aa15.82■□□□□ 0.12
PTCH1-227ENST00000553256 IGKV1-12A0A0C4DH73 117 aa15.82■□□□□ 0.12
PTCH1-227ENST00000553256 TRIM77I1YAP6 450 aa15.82■□□□□ 0.12
PTCH1-227ENST00000553256 LALBAP00709 142 aa15.82■□□□□ 0.12
PTCH1-227ENST00000553256 KNG1P01042 644 aa15.82■□□□□ 0.12
PTCH1-227ENST00000553256 IGKV1D-12P01611 117 aa15.82■□□□□ 0.12
PTCH1-227ENST00000553256 IGHV1-69P01742 117 aa15.82■□□□□ 0.12
PTCH1-227ENST00000553256 AZGP1P25311 298 aaKnown RBP15.82■□□□□ 0.12
PTCH1-227ENST00000553256 CAPGP40121 348 aa15.82■□□□□ 0.12
PTCH1-227ENST00000553256 GABRA2P47869 451 aa15.82■□□□□ 0.12
PTCH1-227ENST00000553256 DLX1P56177 255 aa15.82■□□□□ 0.12
PTCH1-227ENST00000553256 CNN3Q15417 329 aaKnown RBP15.82■□□□□ 0.12
PTCH1-227ENST00000553256 GPR157Q5UAW9 335 aa15.82■□□□□ 0.12
PTCH1-227ENST00000553256 VMO1Q7Z5L0 202 aa15.82■□□□□ 0.12
PTCH1-227ENST00000553256 BATF2Q8N1L9 274 aa15.82■□□□□ 0.12
PTCH1-227ENST00000553256 ZNF561Q8N587 486 aa15.82■□□□□ 0.12
PTCH1-227ENST00000553256 NRG4Q8WWG1 115 aa15.82■□□□□ 0.12
PTCH1-227ENST00000553256 GGHQ92820 318 aa15.82■□□□□ 0.12
PTCH1-227ENST00000553256 PDCD1LG2Q9BQ51 273 aa15.82■□□□□ 0.12
PTCH1-227ENST00000553256 DCLRE1BQ9H816 532 aa15.82■□□□□ 0.12
PTCH1-227ENST00000553256 CLEC2DQ9UHP7 191 aa15.82■□□□□ 0.12
PTCH1-227ENST00000553256 TRBV23-1A0A0A0MS06 115 aa15.81■□□□□ 0.12
PTCH1-227ENST00000553256 TMEM212A6NML5 194 aa15.81■□□□□ 0.12
PTCH1-227ENST00000553256 RNASEK-C17orf49H0YIS7 233 aa15.81■□□□□ 0.12
PTCH1-227ENST00000553256 NXPH2O95156 264 aa15.81■□□□□ 0.12
PTCH1-227ENST00000553256 SERPINA3P01011 423 aa15.81■□□□□ 0.12
PTCH1-227ENST00000553256 RNASE1P07998 156 aaKnown RBP15.81■□□□□ 0.12
PTCH1-227ENST00000553256 NPBWR2P48146 333 aa15.81■□□□□ 0.12
PTCH1-227ENST00000553256 RBP2P50120 134 aa15.81■□□□□ 0.12
PTCH1-227ENST00000553256 OR2G6Q5TZ20 316 aa15.81■□□□□ 0.12
PTCH1-227ENST00000553256 SLC25A26Q70HW3 274 aa15.81■□□□□ 0.12
PTCH1-227ENST00000553256 HAVCR2Q8TDQ0 301 aa15.81■□□□□ 0.12
PTCH1-227ENST00000553256 SPSB1Q96BD6 273 aa15.81■□□□□ 0.12
PTCH1-227ENST00000553256 BORCS8Q96FH0 119 aa15.81■□□□□ 0.12
PTCH1-227ENST00000553256 MRPL48Q96GC5 212 aaKnown RBP15.81■□□□□ 0.12
PTCH1-227ENST00000553256 CEP19Q96LK0 163 aa15.81■□□□□ 0.12
PTCH1-227ENST00000553256 MYCBPQ99417 103 aaPredicted RBP15.81■□□□□ 0.12
PTCH1-227ENST00000553256 C19orf12Q9NSK7 152 aa15.81■□□□□ 0.12
PTCH1-227ENST00000553256 PLCXD1Q9NUJ7 323 aa15.81■□□□□ 0.12
PTCH1-227ENST00000553256 FKBP14Q9NWM8 211 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms