RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 FGFRL1Q8N441 504 aa11.74□□□□□ -0.53
PTCH1-226ENST00000553011 FAM216BQ8N7L0 139 aa11.74□□□□□ -0.53
PTCH1-226ENST00000553011 OR4M2Q8NGB6 313 aa11.74□□□□□ -0.53
PTCH1-226ENST00000553011 OR51A2Q8NGJ7 313 aa11.74□□□□□ -0.53
PTCH1-226ENST00000553011 OR5D14Q8NGL3 314 aa11.74□□□□□ -0.53
PTCH1-226ENST00000553011 ANGPTL6Q8NI99 470 aa11.74□□□□□ -0.53
PTCH1-226ENST00000553011 SLAMF9Q96A28 289 aa11.74□□□□□ -0.53
PTCH1-226ENST00000553011 SPSB1Q96BD6 273 aa11.74□□□□□ -0.53
PTCH1-226ENST00000553011 ORAI1Q96D31 301 aa11.74□□□□□ -0.53
PTCH1-226ENST00000553011 NRIP2Q9BQI9 281 aa11.74□□□□□ -0.53
PTCH1-226ENST00000553011 BEX2Q9BXY8 128 aa11.74□□□□□ -0.53
PTCH1-226ENST00000553011 SHARPINQ9H0F6 387 aa11.74□□□□□ -0.53
PTCH1-226ENST00000553011 TAS2R4Q9NYW5 299 aa11.74□□□□□ -0.53
PTCH1-226ENST00000553011 MTCH1Q9NZJ7 389 aa11.74□□□□□ -0.53
PTCH1-226ENST00000553011 KAAG1Q9UBP8 84 aa11.74□□□□□ -0.53
PTCH1-226ENST00000553011 OR5V1Q9UGF6 321 aa11.74□□□□□ -0.53
PTCH1-226ENST00000553011 CDC42EP3Q9UKI2 254 aa11.74□□□□□ -0.53
PTCH1-226ENST00000553011 DSCAML1Q8TD84 2053 aa11.74□□□□□ -0.53
PTCH1-226ENST00000553011 IGKV1D-17A0A075B6S4 117 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 OR2AT4A6NND4 320 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 C22orf46C9J442 243 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 F8VVB4 439 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 F8VWA3 439 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 DVL1O14640 695 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 SPRY1O43609 319 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-226ENST00000553011 SULT1B1O43704 296 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 NXPH2O95156 264 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 AVPP01185 164 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 CD2P06729 351 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 PSG2P11465 335 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 PCMT1P22061 227 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 EEF1B2P24534 225 aaKnown RBP11.73□□□□□ -0.53
PTCH1-226ENST00000553011 ERVK11-1P61568 191 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 BDH1Q02338 343 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 PAX2Q02962 417 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 ACSM1Q08AH1 577 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 ATRQ13535 2644 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 MED22Q15528 200 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 YIF1BQ5BJH7 314 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 C1orf229Q6ZS94 237 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-226ENST00000553011 LHFPL2Q6ZUX7 228 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 OR5D18Q8NGL1 313 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 GAFA1Q96PS6 74 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 TMPRSS13Q9BYE2 586 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 HES4Q9HCC6 221 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 RASL12Q9NYN1 266 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 ZNF222Q9UK12 451 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 BLOC1S6Q9UL45 172 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 SVEP1Q4LDE5 3571 aa11.73□□□□□ -0.53
PTCH1-226ENST00000553011 PPIAL4CA0A0B4J2A2 164 aa11.72□□□□□ -0.53
PTCH1-226ENST00000553011 NKX6-3A6NJ46 265 aa11.72□□□□□ -0.53
PTCH1-226ENST00000553011 ALX3O95076 343 aa11.72□□□□□ -0.53
PTCH1-226ENST00000553011 CD1AP06126 327 aa11.72□□□□□ -0.53
PTCH1-226ENST00000553011 HCKP08631 526 aa11.72□□□□□ -0.53
PTCH1-226ENST00000553011 ACAA1P09110 424 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-226ENST00000553011 HNF1AP20823 631 aa11.72□□□□□ -0.53
PTCH1-226ENST00000553011 GABRA2P47869 451 aa11.72□□□□□ -0.53
PTCH1-226ENST00000553011 NPY4RP50391 375 aa11.72□□□□□ -0.53
PTCH1-226ENST00000553011 RIPPLY3P57055 190 aa11.72□□□□□ -0.53
PTCH1-226ENST00000553011 PDZK1IP1Q13113 114 aa11.72□□□□□ -0.53
PTCH1-226ENST00000553011 IKZF1Q13422 519 aa11.72□□□□□ -0.53
PTCH1-226ENST00000553011 SMIM21Q3B7S5 101 aa11.72□□□□□ -0.53
PTCH1-226ENST00000553011 Q499Y3 187 aa11.72□□□□□ -0.53
PTCH1-226ENST00000553011 ATPAF1Q5TC12 328 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-226ENST00000553011 ZNF529Q6P280 563 aa11.72□□□□□ -0.53
PTCH1-226ENST00000553011 ZNF788Q6ZQV5 615 aa11.72□□□□□ -0.53
PTCH1-226ENST00000553011 SLC36A1Q7Z2H8 476 aa11.72□□□□□ -0.53
PTCH1-226ENST00000553011 ST8SIA4Q92187 359 aa11.72□□□□□ -0.53
PTCH1-226ENST00000553011 DACT3Q96B18 629 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-226ENST00000553011 CEP19Q96LK0 163 aa11.72□□□□□ -0.53
PTCH1-226ENST00000553011 OR14A2Q96R54 314 aa11.72□□□□□ -0.53
PTCH1-226ENST00000553011 LPAR3Q9UBY5 353 aa11.72□□□□□ -0.53
PTCH1-226ENST00000553011 INSIG2Q9Y5U4 225 aa11.72□□□□□ -0.53
PTCH1-226ENST00000553011 KIAA2026Q5HYC2 2103 aa11.71□□□□□ -0.53
PTCH1-226ENST00000553011 LOC105371242A0A075B767 164 aa11.71□□□□□ -0.53
PTCH1-226ENST00000553011 IGHV2-70DA0A0C4DH43 119 aa11.71□□□□□ -0.53
PTCH1-226ENST00000553011 IGKV1-12A0A0C4DH73 117 aa11.71□□□□□ -0.53
PTCH1-226ENST00000553011 A0A1W2PPK0 400 aa11.71□□□□□ -0.53
PTCH1-226ENST00000553011 RFPL4AA6NLU0 287 aa11.71□□□□□ -0.53
PTCH1-226ENST00000553011 RFPL4AL1F8VTS6 287 aa11.71□□□□□ -0.53
PTCH1-226ENST00000553011 J3QLI3 93 aa11.71□□□□□ -0.53
PTCH1-226ENST00000553011 SIGLEC5O15389 551 aa11.71□□□□□ -0.53
PTCH1-226ENST00000553011 ANGPTL7O43827 346 aa11.71□□□□□ -0.53
PTCH1-226ENST00000553011 IGKV1D-12P01611 117 aa11.71□□□□□ -0.53
PTCH1-226ENST00000553011 HSMCR30P0CW71 290 aa11.71□□□□□ -0.53
PTCH1-226ENST00000553011 RAB3AP20336 220 aa11.71□□□□□ -0.53
PTCH1-226ENST00000553011 BCL3P20749 454 aa11.71□□□□□ -0.53
PTCH1-226ENST00000553011 GATA3P23771 443 aa11.71□□□□□ -0.53
PTCH1-226ENST00000553011 NPBWR2P48146 333 aa11.71□□□□□ -0.53
PTCH1-226ENST00000553011 CEBPDP49716 269 aaPredicted RBP11.71□□□□□ -0.53
PTCH1-226ENST00000553011 DGUOKQ16854 277 aa11.71□□□□□ -0.53
PTCH1-226ENST00000553011 CD177Q8N6Q3 437 aa11.71□□□□□ -0.53
PTCH1-226ENST00000553011 OR52N4Q8NGI2 321 aa11.71□□□□□ -0.53
PTCH1-226ENST00000553011 RAB40AQ8WXH6 277 aa11.71□□□□□ -0.53
PTCH1-226ENST00000553011 POM121Q96HA1 1249 aa11.71□□□□□ -0.53
PTCH1-226ENST00000553011 NKX3-1Q99801 234 aaPredicted RBP11.71□□□□□ -0.53
PTCH1-226ENST00000553011 NUDT16L1Q9BRJ7 211 aaKnown RBP11.71□□□□□ -0.53
PTCH1-226ENST00000553011 DNTTIP1Q9H147 329 aa11.71□□□□□ -0.53
PTCH1-226ENST00000553011 C7orf69Q9H7B7 122 aa11.71□□□□□ -0.53
PTCH1-226ENST00000553011 NEK6Q9HC98 313 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms