RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 LINC01006Q8NI28 216 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 DACT3Q96B18 629 aaPredicted RBP7.19□□□□□ -1.26
TMEM116-217ENST00000552801 OTULINQ96BN8 352 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 Q96MT0 163 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 HIST1H2AAQ96QV6 131 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 MGLLQ99685 303 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 KCNJ15Q99712 375 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 MICU1Q9BPX6 476 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 CENPOQ9BU64 300 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 SSBP4Q9BWG4 385 aaPredicted RBP7.19□□□□□ -1.26
TMEM116-217ENST00000552801 PAPOLGQ9BWT3 736 aaKnown RBP7.19□□□□□ -1.26
TMEM116-217ENST00000552801 FAM234AQ9H0X4 552 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 SMURF1Q9HCE7 757 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 CLN6Q9NWW5 311 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 NDUFB11Q9NX14 153 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 RPUSD1Q9UJJ7 312 aaKnown RBP7.19□□□□□ -1.26
TMEM116-217ENST00000552801 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.19□□□□□ -1.26
TMEM116-217ENST00000552801 A0A1B0GWJ7 208 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 A0A1W2PRD5 423 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 A0A1W2PRF3 423 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 A0A1W2PRM7 423 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 MEIOCA2RUB1 952 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 RIIAD1A6NNX1 92 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 ZNF593O00488 134 aaPredicted RBP7.18□□□□□ -1.26
TMEM116-217ENST00000552801 SLC2A1P11166 492 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 MMP9P14780 707 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 NDUFB7P17568 137 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 S100A5P33763 92 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 SOX6P35712 828 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 RPS27P42677 84 aaKnown RBP7.18□□□□□ -1.26
TMEM116-217ENST00000552801 GSSP48637 474 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 CX3CR1P49238 355 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 FXYD6P3P58550 94 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 DEFA1P59665 94 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 DEFA3P59666 94 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 ZNF91Q05481 1191 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 MLLT11Q13015 90 aaPredicted RBP7.18□□□□□ -1.26
TMEM116-217ENST00000552801 RSPO1Q2MKA7 263 aaPredicted RBP7.18□□□□□ -1.26
TMEM116-217ENST00000552801 KRTAP27-1Q3LI81 207 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 NCR3LG1Q68D85 454 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 LDLRAD3Q86YD5 345 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 FAM90A1Q86YD7 464 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 SNX29P2Q8IUI4 249 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 PARP16Q8N5Y8 322 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 DTX3Q8N9I9 347 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 CSNK2A3Q8NEV1 391 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 OR52H1Q8NGJ2 320 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 OR51L1Q8NGJ5 315 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 OR8J1Q8NGP2 316 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 OR9Q1Q8NGQ5 310 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 OR5R1Q8NH85 324 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 SLAMF6Q96DU3 332 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 REEP6Q96HR9 211 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 PGAM5Q96HS1 289 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 MAP6Q96JE9 813 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 CCL13Q99616 98 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 SDHCQ99643 169 aaPredicted RBP7.18□□□□□ -1.26
TMEM116-217ENST00000552801 RTL8AQ9BWD3 113 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 SIRPDQ9H106 197 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 OR10A2Q9H208 303 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 OR51E2Q9H255 320 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 PNRC2Q9NPJ4 139 aaKnown RBP7.18□□□□□ -1.26
TMEM116-217ENST00000552801 SIRT7Q9NRC8 400 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 MRPS18AQ9NVS2 196 aaKnown RBP7.18□□□□□ -1.26
TMEM116-217ENST00000552801 VPREB3Q9UKI3 123 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 CDH10Q9Y6N8 788 aa7.18□□□□□ -1.26
TMEM116-217ENST00000552801 TET2Q6N021 2002 aaPredicted RBP7.17□□□□□ -1.26
TMEM116-217ENST00000552801 TMEM238LA0A1B0GVL6 79 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 ZNF670-ZNF695F2Z2N8 137 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 NPFFO15130 113 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 GPX5O75715 221 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 GASTP01350 101 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 H2AFB1P0C5Y9 115 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 H2AFB2P0C5Z0 115 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 TRAPPC2P0DI81 140 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 TRAPPC2BP0DI82 140 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 DBTP11182 482 aaKnown RBP7.17□□□□□ -1.26
TMEM116-217ENST00000552801 ZNF3P17036 446 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 GABRA5P31644 462 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 CAPZA1P52907 286 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 EFNB1P98172 346 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 EGR3Q06889 387 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 CD300CQ08708 224 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 EIF2B1Q14232 305 aaKnown RBP7.17□□□□□ -1.26
TMEM116-217ENST00000552801 PCK2Q16822 640 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 WDR38Q5JTN6 314 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 TEX36Q5VZQ5 186 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 ASPHD2Q6ICH7 369 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 C1QL4Q86Z23 238 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 TIGD4Q8IY51 512 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 GCSAMQ8N6F7 178 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 OR4C13Q8NGP0 309 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 TMEM80Q96HE8 168 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 MED30Q96HR3 178 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 OR5M11Q96RB7 305 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 MND1Q9BWT6 205 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 C6orf62Q9GZU0 229 aaPredicted RBP7.17□□□□□ -1.26
TMEM116-217ENST00000552801 PPA2Q9H2U2 334 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 EGLN3Q9H6Z9 239 aa7.17□□□□□ -1.26
TMEM116-217ENST00000552801 ABCB9Q9NP78 766 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms