RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 Q6ZS92 163 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 FAM214BQ7L5A3 538 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 TMEM17Q86X19 198 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 OR5L1Q8NGL2 311 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 OR13G1Q8NGZ3 307 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 OR8S1Q8NH09 359 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 MBD3L2Q8NHZ7 208 aaPredicted RBP8.59□□□□□ -1.03
RAB5B-206ENST00000549505 PLK3Q9H4B4 646 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 ZMAT3Q9HA38 289 aaKnown RBP8.59□□□□□ -1.03
RAB5B-206ENST00000549505 SLC23A1Q9UHI7 598 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 PRSS50Q9UI38 385 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 BDP1A6H8Y1 2624 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 TRAV14DV4A0A0A6YYC5 116 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 SFT2D2O95562 160 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 CTRB1P17538 263 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 NFYAP23511 347 aaPredicted RBP8.59□□□□□ -1.03
RAB5B-206ENST00000549505 OR3A3P47888 321 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 FGF12P61328 243 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 SRYQ05066 204 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 IL24Q13007 206 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 SHEQ5VZ18 495 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 CTRB2Q6GPI1 263 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 OR52W1Q6IF63 320 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 ZNF880Q6PDB4 577 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 CHMP1BQ7LBR1 199 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 MCEMP1Q8IX19 187 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 NMES1Q9C002 83 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 C5orf66Q9H5L9 145 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 RAB18Q9NP72 206 aa8.59□□□□□ -1.03
RAB5B-206ENST00000549505 B8ZZF3 427 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 PDCD6O75340 191 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 DIRAS3O95661 229 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 IGLV1-44P01699 117 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 CXCL2P19875 107 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 IL32P24001 234 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 PTGER4P35408 488 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 IL13RA2Q14627 380 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 GABRA6Q16445 453 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 SLC51BQ86UW2 128 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 GAPTQ8N292 157 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 FTMTQ8N4E7 242 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 LRRC20Q8TCA0 184 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 SARAFQ96BY9 339 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 S100A13Q99584 98 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 MYEF2Q9P2K5 600 aaKnown RBP8.58□□□□□ -1.04
RAB5B-206ENST00000549505 LHX6Q9UPM6 363 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 VCANP13611 3396 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 MPC2O95563 127 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 IGKV3-15P01624 115 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 CTSDP07339 412 aaPredicted RBP8.58□□□□□ -1.04
RAB5B-206ENST00000549505 CBR1P16152 277 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 AKR1D1P51857 326 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 PLP2Q04941 152 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 RSU1Q15404 277 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 CLLU1Q5K131 121 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 ZDHHC23Q8IYP9 409 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 LRTM2Q8N967 370 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 ZNF680Q8NEM1 530 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 OR5H2Q8NGV7 314 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 DEFB127Q9H1M4 99 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 TREM2Q9NZC2 230 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 ANXA10Q9UJ72 324 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 NAPSAO96009 420 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 HLA-HP01893 362 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 FCGR3AP08637 254 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 TMEM225BP0DP42 221 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 IGHV1-2P23083 117 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 KIR2DL2P43627 348 aaPredicted RBP8.58□□□□□ -1.04
RAB5B-206ENST00000549505 SNU13P55769 128 aaKnown RBP8.58□□□□□ -1.04
RAB5B-206ENST00000549505 PRDX4Q13162 271 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 PPP1R1AQ13522 171 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 DCAF12L2Q5VW00 463 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 VASH2Q86V25 355 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 MKXQ8IYA7 352 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 OR10AD1Q8NGE0 317 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 LDAHQ9H6V9 325 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 STARD10Q9Y365 291 aa8.58□□□□□ -1.04
RAB5B-206ENST00000549505 RPS10-NUDT3A0A1W2PQS6 291 aa8.57□□□□□ -1.04
RAB5B-206ENST00000549505 RNF222A6NCQ9 220 aa8.57□□□□□ -1.04
RAB5B-206ENST00000549505 RLN1P04808 185 aa8.57□□□□□ -1.04
RAB5B-206ENST00000549505 SERPINA2P20848 420 aa8.57□□□□□ -1.04
RAB5B-206ENST00000549505 SUPT4H1P63272 117 aaKnown RBP8.57□□□□□ -1.04
RAB5B-206ENST00000549505 CTAG1AP78358 180 aa8.57□□□□□ -1.04
RAB5B-206ENST00000549505 ACSF3Q4G176 576 aaPredicted RBP8.57□□□□□ -1.04
RAB5B-206ENST00000549505 PHB2Q99623 299 aa8.57□□□□□ -1.04
RAB5B-206ENST00000549505 TLNRD1Q9H1K6 362 aa8.57□□□□□ -1.04
RAB5B-206ENST00000549505 CSAG2Q9Y5P2 127 aa8.57□□□□□ -1.04
RAB5B-206ENST00000549505 CD300LBA8K4G0 201 aa8.57□□□□□ -1.04
RAB5B-206ENST00000549505 IQCF6A8MYZ5 107 aa8.57□□□□□ -1.04
RAB5B-206ENST00000549505 NOS1APO75052 506 aaPredicted RBP8.57□□□□□ -1.04
RAB5B-206ENST00000549505 SLC22A5O76082 557 aa8.57□□□□□ -1.04
RAB5B-206ENST00000549505 PMP2P02689 132 aa8.57□□□□□ -1.04
RAB5B-206ENST00000549505 IFNA6P05013 189 aa8.57□□□□□ -1.04
RAB5B-206ENST00000549505 HOXD4P09016 255 aaPredicted RBP8.57□□□□□ -1.04
RAB5B-206ENST00000549505 SELEP16581 610 aa8.57□□□□□ -1.04
RAB5B-206ENST00000549505 FUT3P21217 361 aa8.57□□□□□ -1.04
RAB5B-206ENST00000549505 CD34P28906 385 aa8.57□□□□□ -1.04
RAB5B-206ENST00000549505 ERVK11-1P61568 191 aa8.57□□□□□ -1.04
RAB5B-206ENST00000549505 ZNF169Q14929 603 aaPredicted RBP8.57□□□□□ -1.04
RAB5B-206ENST00000549505 C4orf46Q504U0 113 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms