RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 CTAG2O75638 210 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 AGFG2O95081 481 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 NAAAQ02083 359 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 OC90Q02509 493 aaPredicted RBP4.11□□□□□ -1.75
SCAF11-212ENST00000549162 PLXDC2Q6UX71 529 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 RD3Q7Z3Z2 195 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 IGFN1Q86VF2 1251 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 FJX1Q86VR8 437 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 CPEB3Q8NE35 698 aaKnown RBP4.11□□□□□ -1.75
SCAF11-212ENST00000549162 KCNG3Q8TAE7 436 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 ORAI1Q96D31 301 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 RNF170Q96K19 258 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 TSSK2Q96PF2 358 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 YPEL2Q96QA6 119 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 KLRF1Q9NZS2 232 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 NUBP2Q9Y5Y2 271 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 V9GY05 133 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 KIF26BQ2KJY2 2108 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF593O00488 134 aaPredicted RBP4.11□□□□□ -1.75
SCAF11-212ENST00000549162 CELA2AP08217 269 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF24P17028 368 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 BDKRB2P30411 391 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 MAS1LP35410 378 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 MAGEA5P43359 124 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 MLLT10P55197 1068 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 UNC119Q13432 240 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 GXYLT1Q4G148 440 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 IGSF11Q5DX21 431 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 GLYATL3Q5SZD4 288 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 EIF4E3Q8N5X7 224 aaKnown RBP4.11□□□□□ -1.75
SCAF11-212ENST00000549162 OR52E2Q8NGJ4 325 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 MRGPRFQ96AM1 343 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 SCNM1Q9BWG6 230 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 NOX3Q9HBY0 568 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 PEMTQ9UBM1 199 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 OR5V1Q9UGF6 321 aa4.11□□□□□ -1.75
SCAF11-212ENST00000549162 PURGQ9UJV8 347 aaKnown RBP4.11□□□□□ -1.75
SCAF11-212ENST00000549162 TRBV6-1A0A0K0K1D8 114 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 HMSDA8MTL9 139 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 OPN1SWP03999 348 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 LCKP06239 509 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 GSTT2BP0CG30 244 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 SNRPBP14678 240 aaKnown RBP4.1□□□□□ -1.75
SCAF11-212ENST00000549162 CD36P16671 472 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 GADD45AP24522 165 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 RPS19P39019 145 aaKnown RBP4.1□□□□□ -1.75
SCAF11-212ENST00000549162 BIDP55957 195 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 RBM11P57052 281 aaKnown RBP4.1□□□□□ -1.75
SCAF11-212ENST00000549162 MFGE8Q08431 387 aaPredicted RBP4.1□□□□□ -1.75
SCAF11-212ENST00000549162 TBC1D28Q2M2D7 210 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 BEX5Q5H9J7 111 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF841Q6ZN19 808 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF833PQ6ZTB9 187 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 AAED1Q7RTV5 226 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 COX8CQ7Z4L0 72 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 P3H2Q8IVL5 708 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 MISP3Q96FF7 219 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 HIST1H2AAQ96QV6 131 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 FOXC2Q99958 501 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 PECRQ9BY49 303 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 SLC7A10Q9NS82 523 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 SH3GLB1Q9Y371 365 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 TRGV8A0A0C4DH27 118 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 SPAARA0A1B0GVQ0 90 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 H3BUA1 57 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 XKRYO14609 159 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 WIPF1O43516 503 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 TLX2O43763 284 aaPredicted RBP4.1□□□□□ -1.75
SCAF11-212ENST00000549162 HLA-AP01891 365 aaKnown RBP4.1□□□□□ -1.75
SCAF11-212ENST00000549162 HLA-DOBP13765 273 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 TNNI3P19429 210 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 PTGER1P34995 402 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 RPS25P62851 125 aaKnown RBP4.1□□□□□ -1.75
SCAF11-212ENST00000549162 IGFBP7Q16270 282 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 GLT8D1Q68CQ7 371 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF788Q6ZQV5 615 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 Q6ZTK2 550 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 NCCRP1Q6ZVX7 275 aaPredicted RBP4.1□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF761Q86XN6 746 aaPredicted RBP4.1□□□□□ -1.75
SCAF11-212ENST00000549162 UXS1Q8NBZ7 420 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 OR9Q1Q8NGQ5 310 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 NPIPB3Q92617 1050 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 C4orf36Q96KX1 117 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 NMNAT3Q96T66 252 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 PLEKHF2Q9H8W4 249 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 PROCRQ9UNN8 238 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 POLDIP2Q9Y2S7 368 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF503-AS2A6NEH8 195 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 H0YC42 278 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 TNFSF11O14788 317 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 SGCEO43556 437 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 NDUFB6O95139 128 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 TCRBP04435 133 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 DBHP09172 617 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 GYPEP15421 78 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 RAB3BP20337 219 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 PRKAG1P54619 331 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 CLRN1P58418 232 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 GMFBP60983 142 aa4.1□□□□□ -1.75
SCAF11-212ENST00000549162 LOXL1Q08397 574 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms