RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 C1orf100Q5SVJ3 147 aa17.67■□□□□ 0.42
CACNB3-210ENST00000548874 GLT8D1Q68CQ7 371 aa17.67■□□□□ 0.42
CACNB3-210ENST00000548874 SLC16A12Q6ZSM3 486 aa17.67■□□□□ 0.42
CACNB3-210ENST00000548874 C1QL2Q7Z5L3 287 aa17.67■□□□□ 0.42
CACNB3-210ENST00000548874 ANKRD13BQ86YJ7 626 aa17.67■□□□□ 0.42
CACNB3-210ENST00000548874 BOLLQ8N9W6 283 aaKnown RBP17.67■□□□□ 0.42
CACNB3-210ENST00000548874 PNLDC1Q8NA58 520 aaKnown RBP17.67■□□□□ 0.42
CACNB3-210ENST00000548874 C19orf18Q8NEA5 215 aa17.67■□□□□ 0.42
CACNB3-210ENST00000548874 FOXRED1Q96CU9 486 aaPredicted RBP17.67■□□□□ 0.42
CACNB3-210ENST00000548874 SEH1LQ96EE3 360 aa17.67■□□□□ 0.42
CACNB3-210ENST00000548874 CEP19Q96LK0 163 aa17.67■□□□□ 0.42
CACNB3-210ENST00000548874 CNTD2Q9H8S5 307 aa17.67■□□□□ 0.42
CACNB3-210ENST00000548874 TMEM165Q9HC07 324 aa17.67■□□□□ 0.42
CACNB3-210ENST00000548874 RASL12Q9NYN1 266 aa17.67■□□□□ 0.42
CACNB3-210ENST00000548874 AK6Q9Y3D8 172 aaKnown RBP17.67■□□□□ 0.42
CACNB3-210ENST00000548874 F8VVB4 439 aa17.66■□□□□ 0.42
CACNB3-210ENST00000548874 F8VWA3 439 aa17.66■□□□□ 0.42
CACNB3-210ENST00000548874 GABARAPO95166 117 aa17.66■□□□□ 0.42
CACNB3-210ENST00000548874 TMEM225BP0DP42 221 aa17.66■□□□□ 0.42
CACNB3-210ENST00000548874 MUC1P15941 1255 aaPredicted RBP17.66■□□□□ 0.42
CACNB3-210ENST00000548874 GLRA1P23415 457 aa17.66■□□□□ 0.42
CACNB3-210ENST00000548874 ZNF404Q494X3 552 aa17.66■□□□□ 0.42
CACNB3-210ENST00000548874 SFRP4Q6FHJ7 346 aaPredicted RBP17.66■□□□□ 0.42
CACNB3-210ENST00000548874 Q8IYB0 196 aa17.66■□□□□ 0.42
CACNB3-210ENST00000548874 MUC20Q8N307 709 aaPredicted RBP17.66■□□□□ 0.42
CACNB3-210ENST00000548874 NAA50Q9GZZ1 169 aaKnown RBP17.66■□□□□ 0.42
CACNB3-210ENST00000548874 SMURF1Q9HCE7 757 aa17.66■□□□□ 0.42
CACNB3-210ENST00000548874 TRAV38-1A0A0B4J264 116 aa17.65■□□□□ 0.42
CACNB3-210ENST00000548874 IGHV4-61A0A0C4DH41 118 aa17.65■□□□□ 0.42
CACNB3-210ENST00000548874 TRAPPC2LH3BP13 241 aa17.65■□□□□ 0.42
CACNB3-210ENST00000548874 PDCD5O14737 125 aa17.65■□□□□ 0.42
CACNB3-210ENST00000548874 BCL3P20749 454 aa17.65■□□□□ 0.42
CACNB3-210ENST00000548874 NPBWR2P48146 333 aa17.65■□□□□ 0.42
CACNB3-210ENST00000548874 GPR107Q5VW38 600 aa17.65■□□□□ 0.42
CACNB3-210ENST00000548874 FAM166AQ6J272 317 aa17.65■□□□□ 0.42
CACNB3-210ENST00000548874 ACP7Q6ZNF0 438 aa17.65■□□□□ 0.42
CACNB3-210ENST00000548874 TPRA1Q86W33 373 aa17.65■□□□□ 0.42
CACNB3-210ENST00000548874 FAM90A1Q86YD7 464 aa17.65■□□□□ 0.42
CACNB3-210ENST00000548874 Q8NFD4 153 aa17.65■□□□□ 0.42
CACNB3-210ENST00000548874 OR4D6Q8NGJ1 314 aa17.65■□□□□ 0.42
CACNB3-210ENST00000548874 C12orf43Q96C57 262 aaKnown RBP17.65■□□□□ 0.42
CACNB3-210ENST00000548874 TMEM246Q9BRR3 403 aa17.65■□□□□ 0.42
CACNB3-210ENST00000548874 REG4Q9BYZ8 158 aa17.65■□□□□ 0.42
CACNB3-210ENST00000548874 FAM192AQ9GZU8 254 aa17.65■□□□□ 0.42
CACNB3-210ENST00000548874 RHOFQ9HBH0 211 aa17.65■□□□□ 0.42
CACNB3-210ENST00000548874 IL36GQ9NZH8 169 aa17.65■□□□□ 0.42
CACNB3-210ENST00000548874 IGHV3OR15-7A0A075B7D8 119 aa17.64■□□□□ 0.41
CACNB3-210ENST00000548874 ISPDA4D126 451 aa17.64■□□□□ 0.41
CACNB3-210ENST00000548874 TNFRSF13BO14836 293 aaPredicted RBP17.64■□□□□ 0.41
CACNB3-210ENST00000548874 NXPH2O95156 264 aa17.64■□□□□ 0.41
CACNB3-210ENST00000548874 SFTPBP07988 381 aa17.64■□□□□ 0.41
CACNB3-210ENST00000548874 RAB3BP20337 219 aa17.64■□□□□ 0.41
CACNB3-210ENST00000548874 PSMD7P51665 324 aa17.64■□□□□ 0.41
CACNB3-210ENST00000548874 GMFBP60983 142 aa17.64■□□□□ 0.41
CACNB3-210ENST00000548874 CTF1Q16619 201 aa17.64■□□□□ 0.41
CACNB3-210ENST00000548874 MICBQ29980 383 aa17.64■□□□□ 0.41
CACNB3-210ENST00000548874 SMIM21Q3B7S5 101 aa17.64■□□□□ 0.41
CACNB3-210ENST00000548874 SPNS3Q6ZMD2 512 aa17.64■□□□□ 0.41
CACNB3-210ENST00000548874 NR2C2APQ86WQ0 139 aa17.64■□□□□ 0.41
CACNB3-210ENST00000548874 BATF2Q8N1L9 274 aa17.64■□□□□ 0.41
CACNB3-210ENST00000548874 DEFB108BQ8NET1 73 aa17.64■□□□□ 0.41
CACNB3-210ENST00000548874 C1orf147Q96MC9 270 aaPredicted RBP17.64■□□□□ 0.41
CACNB3-210ENST00000548874 RBFOX1Q9NWB1 397 aaKnown RBP17.64■□□□□ 0.41
CACNB3-210ENST00000548874 NLKQ9UBE8 527 aa17.64■□□□□ 0.41
CACNB3-210ENST00000548874 MRPS28Q9Y2Q9 187 aaKnown RBP17.64■□□□□ 0.41
CACNB3-210ENST00000548874 V9GY05 133 aa17.64■□□□□ 0.41
CACNB3-210ENST00000548874 A0A0G2JK05 382 aa17.63■□□□□ 0.41
CACNB3-210ENST00000548874 SLC17A2O00624 439 aa17.63■□□□□ 0.41
CACNB3-210ENST00000548874 SLC22A1O15245 554 aa17.63■□□□□ 0.41
CACNB3-210ENST00000548874 CDRT1O95170 752 aa17.63■□□□□ 0.41
CACNB3-210ENST00000548874 USF1P22415 310 aaPredicted RBP17.63■□□□□ 0.41
CACNB3-210ENST00000548874 CFPP27918 469 aa17.63■□□□□ 0.41
CACNB3-210ENST00000548874 SDC2P34741 201 aa17.63■□□□□ 0.41
CACNB3-210ENST00000548874 TGFBR1P36897 503 aa17.63■□□□□ 0.41
CACNB3-210ENST00000548874 OR10A3P58181 314 aa17.63■□□□□ 0.41
CACNB3-210ENST00000548874 LSM3P62310 102 aaKnown RBP17.63■□□□□ 0.41
CACNB3-210ENST00000548874 LOXL1Q08397 574 aaPredicted RBP17.63■□□□□ 0.41
CACNB3-210ENST00000548874 STUMQ69YW2 141 aa17.63■□□□□ 0.41
CACNB3-210ENST00000548874 ELP2Q6IA86 826 aa17.63■□□□□ 0.41
CACNB3-210ENST00000548874 SPICQ8N5J4 248 aa17.63■□□□□ 0.41
CACNB3-210ENST00000548874 OR6M1Q8NGM8 313 aa17.63■□□□□ 0.41
CACNB3-210ENST00000548874 CLDND2Q8NHS1 167 aa17.63■□□□□ 0.41
CACNB3-210ENST00000548874 TBC1D15Q8TC07 691 aa17.63■□□□□ 0.41
CACNB3-210ENST00000548874 HMG20AQ9NP66 347 aa17.63■□□□□ 0.41
CACNB3-210ENST00000548874 DNAJB11Q9UBS4 358 aa17.63■□□□□ 0.41
CACNB3-210ENST00000548874 AKAP9Q99996 3911 aa17.63■□□□□ 0.41
CACNB3-210ENST00000548874 CEACAM18A8MTB9 384 aa17.62■□□□□ 0.41
CACNB3-210ENST00000548874 RNF223E7ERA6 249 aa17.62■□□□□ 0.41
CACNB3-210ENST00000548874 HTR2CP28335 458 aa17.62■□□□□ 0.41
CACNB3-210ENST00000548874 KCNJ8Q15842 424 aa17.62■□□□□ 0.41
CACNB3-210ENST00000548874 AWAT2Q6E213 333 aa17.62■□□□□ 0.41
CACNB3-210ENST00000548874 GLIPR1L1Q6UWM5 242 aa17.62■□□□□ 0.41
CACNB3-210ENST00000548874 DCDC5Q6ZRR9 648 aa17.62■□□□□ 0.41
CACNB3-210ENST00000548874 FAM58AQ8N1B3 248 aa17.62■□□□□ 0.41
CACNB3-210ENST00000548874 ANGPTL6Q8NI99 470 aa17.62■□□□□ 0.41
CACNB3-210ENST00000548874 EMG1Q92979 244 aaKnown RBP17.62■□□□□ 0.41
CACNB3-210ENST00000548874 SLC25A28Q96A46 364 aa17.62■□□□□ 0.41
CACNB3-210ENST00000548874 GAL3ST1Q99999 423 aa17.62■□□□□ 0.41
CACNB3-210ENST00000548874 METTL9Q9H1A3 318 aa17.62■□□□□ 0.41
CACNB3-210ENST00000548874 NARFLQ9H6Q4 476 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms