RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 CBLN2Q8IUK8 224 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF100Q8IYN0 542 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 LGI3Q8N145 548 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF283Q8N7M2 679 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 FADS6Q8N9I5 356 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 TCTEX1D2Q8WW35 142 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF501Q96CX3 271 aaPredicted RBP5.66□□□□□ -1.5
SNHG1-225ENST00000545920 PGAM5Q96HS1 289 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 OR10C1Q96KK4 312 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 NAA11Q9BSU3 229 aaPredicted RBP5.66□□□□□ -1.5
SNHG1-225ENST00000545920 METTL9Q9H1A3 318 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 SLC35B3Q9H1N7 401 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 HRH4Q9H3N8 390 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 NELFAQ9H3P2 528 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 NAA60Q9H7X0 242 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 SEBOXQ9HB31 216 aaPredicted RBP5.66□□□□□ -1.5
SNHG1-225ENST00000545920 PNRC2Q9NPJ4 139 aaKnown RBP5.66□□□□□ -1.5
SNHG1-225ENST00000545920 OR5AC2Q9NZP5 309 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 NXT1Q9UKK6 140 aaKnown RBP5.66□□□□□ -1.5
SNHG1-225ENST00000545920 PADI1Q9ULC6 663 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 VDAC3Q9Y277 283 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 DOCK8Q8NF50 2099 aa5.66□□□□□ -1.5
SNHG1-225ENST00000545920 HEATR5AQ86XA9 2040 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 LOC100509620A0A075B734 347 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 A0A087WWC5 75 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 IGHV1OR15-9A0A0B4J2B8 117 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-225ENST00000545920 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-225ENST00000545920 MSGN1A6NI15 193 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 GJE1A6NN92 205 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 H3BSH0 61 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 ST8SIA3O43173 380 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 HSPA12AO43301 675 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 GATCO43716 136 aaKnown RBP5.65□□□□□ -1.5
SNHG1-225ENST00000545920 LMX1BO60663 402 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 ADAP1O75689 374 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 HBE1P02100 147 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 HPNP05981 417 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 HEXBP07686 556 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 SFTPBP07988 381 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF728P0DKX0 622 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 LIPCP11150 499 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 SLC2A1P11166 492 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF17P17021 662 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 BCKDHBP21953 392 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 LMO1P25800 156 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 CHATP28329 748 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 RPL35P42766 123 aaKnown RBP5.65□□□□□ -1.5
SNHG1-225ENST00000545920 LPAR6P43657 344 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 OR3A4PP47883 348 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 DHPSP49366 369 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-225ENST00000545920 PPM1FP49593 454 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-225ENST00000545920 TMEM33P57088 247 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 NXPH1P58417 271 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 S100A10P60903 97 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 RAB2AP61019 212 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 RND3P61587 244 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 BAXQ07812 192 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 HABP2Q14520 560 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-225ENST00000545920 GNMTQ14749 295 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 PDCD1Q15116 288 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 OR8G1Q15617 311 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 ACSF3Q4G176 576 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF542PQ5EBM4 170 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 GGNBP1Q5YKI7 109 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 RPL7L1Q6DKI1 246 aaKnown RBP5.65□□□□□ -1.5
SNHG1-225ENST00000545920 TMEM211Q6ICI0 200 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 Q6ZRG5 221 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 METTL27Q8N6F8 245 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-225ENST00000545920 APCDD1LQ8NCL9 501 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 TMEM104Q8NE00 496 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 TSTD1Q8NFU3 115 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 SEMA6DQ8NFY4 1073 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 OR10G4Q8NGN3 311 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 TMEM54Q969K7 222 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 HIST1H2BAQ96A08 127 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 GNPNAT1Q96EK6 184 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-225ENST00000545920 MARS2Q96GW9 593 aaKnown RBP5.65□□□□□ -1.5
SNHG1-225ENST00000545920 FOXN4Q96NZ1 517 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 KLHDC3Q9BQ90 382 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 NICN1Q9BSH3 213 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 SF3B5Q9BWJ5 86 aaKnown RBP5.65□□□□□ -1.5
SNHG1-225ENST00000545920 SLC25A31Q9H0C2 315 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 OR51M1Q9H341 326 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 TMPRSS5Q9H3S3 457 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 ESRP2Q9H6T0 727 aaKnown RBP5.65□□□□□ -1.5
SNHG1-225ENST00000545920 BCO1Q9HAY6 547 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF160Q9HCG1 818 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 SIRT7Q9NRC8 400 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 PLEKHJ1Q9NW61 149 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 MED29Q9NX70 200 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 KLRF1Q9NZS2 232 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 FBXL17Q9UF56 701 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 ANXA10Q9UJ72 324 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 AMDHD2Q9Y303 409 aa5.65□□□□□ -1.5
SNHG1-225ENST00000545920 CPAMD8Q8IZJ3 1885 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 FANCMQ8IYD8 2048 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 IGKV1D-43A0A0B4J1Z2 117 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 IGKV1-9A0A0C4DH69 117 aa5.64□□□□□ -1.51
SNHG1-225ENST00000545920 PMS2P1A4D2B8 440 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms