RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 SMIM3Q9BZL3 60 aa13.29□□□□□ -0.28
CNN3-207ENST00000545882 SH2D2AQ9NP31 389 aa13.29□□□□□ -0.28
CNN3-207ENST00000545882 LSM5Q9Y4Y9 91 aaKnown RBP13.29□□□□□ -0.28
CNN3-207ENST00000545882 TERTO14746 1132 aaKnown RBP13.29□□□□□ -0.28
CNN3-207ENST00000545882 AGPAT2O15120 278 aa13.29□□□□□ -0.28
CNN3-207ENST00000545882 SYNGR3O43761 229 aa13.29□□□□□ -0.28
CNN3-207ENST00000545882 CRYBA1P05813 215 aa13.29□□□□□ -0.28
CNN3-207ENST00000545882 OPRM1P35372 400 aa13.29□□□□□ -0.28
CNN3-207ENST00000545882 DSCR4P56555 118 aaPredicted RBP13.29□□□□□ -0.28
CNN3-207ENST00000545882 MRPS34P82930 218 aaKnown RBP13.29□□□□□ -0.28
CNN3-207ENST00000545882 TMEM187Q14656 261 aa13.29□□□□□ -0.28
CNN3-207ENST00000545882 SP6Q3SY56 376 aa13.29□□□□□ -0.28
CNN3-207ENST00000545882 CLEC9AQ6UXN8 241 aa13.29□□□□□ -0.28
CNN3-207ENST00000545882 ASCL4Q6XD76 172 aa13.29□□□□□ -0.28
CNN3-207ENST00000545882 Q6ZRG5 221 aa13.29□□□□□ -0.28
CNN3-207ENST00000545882 MAML2Q8IZL2 1156 aaPredicted RBP13.29□□□□□ -0.28
CNN3-207ENST00000545882 DYRK2Q92630 601 aa13.29□□□□□ -0.28
CNN3-207ENST00000545882 SPTSSAQ969W0 71 aa13.29□□□□□ -0.28
CNN3-207ENST00000545882 SULT4A1Q9BR01 284 aa13.29□□□□□ -0.28
CNN3-207ENST00000545882 ULBP2Q9BZM5 246 aa13.29□□□□□ -0.28
CNN3-207ENST00000545882 METTL9Q9H1A3 318 aa13.29□□□□□ -0.28
CNN3-207ENST00000545882 ARV1Q9H2C2 271 aa13.29□□□□□ -0.28
CNN3-207ENST00000545882 HSF4Q9ULV5 492 aa13.29□□□□□ -0.28
CNN3-207ENST00000545882 EDARQ9UNE0 448 aa13.29□□□□□ -0.28
CNN3-207ENST00000545882 CCDC163A0A0D9SF12 145 aa13.28□□□□□ -0.28
CNN3-207ENST00000545882 FAM230AA0A1W2PPH8 454 aa13.28□□□□□ -0.28
CNN3-207ENST00000545882 TNFSF11O14788 317 aa13.28□□□□□ -0.28
CNN3-207ENST00000545882 APOC1P02654 83 aa13.28□□□□□ -0.28
CNN3-207ENST00000545882 MBPP02686 304 aaPredicted RBP13.28□□□□□ -0.28
CNN3-207ENST00000545882 CYC1P08574 325 aa13.28□□□□□ -0.28
CNN3-207ENST00000545882 OR8U9P0C7N5 309 aa13.28□□□□□ -0.28
CNN3-207ENST00000545882 COX6A1P12074 109 aa13.28□□□□□ -0.28
CNN3-207ENST00000545882 CHATP28329 748 aa13.28□□□□□ -0.28
CNN3-207ENST00000545882 HOXA6P31267 233 aa13.28□□□□□ -0.28
CNN3-207ENST00000545882 CD80P33681 288 aa13.28□□□□□ -0.28
CNN3-207ENST00000545882 PIGPP57054 158 aa13.28□□□□□ -0.28
CNN3-207ENST00000545882 CHAF1BQ13112 559 aa13.28□□□□□ -0.28
CNN3-207ENST00000545882 PDZK1IP1Q13113 114 aa13.28□□□□□ -0.28
CNN3-207ENST00000545882 OPN5Q6U736 354 aa13.28□□□□□ -0.28
CNN3-207ENST00000545882 OR8U1Q8NH10 309 aa13.28□□□□□ -0.28
CNN3-207ENST00000545882 GLYATL2Q8WU03 294 aa13.28□□□□□ -0.28
CNN3-207ENST00000545882 NAA11Q9BSU3 229 aaPredicted RBP13.28□□□□□ -0.28
CNN3-207ENST00000545882 WDR54Q9H977 334 aa13.28□□□□□ -0.28
CNN3-207ENST00000545882 IGKV1-12A0A0C4DH73 117 aa13.27□□□□□ -0.28
CNN3-207ENST00000545882 PCP4L1A6NKN8 68 aa13.27□□□□□ -0.28
CNN3-207ENST00000545882 COLCA2A8K830 154 aa13.27□□□□□ -0.28
CNN3-207ENST00000545882 MASP2O00187 686 aa13.27□□□□□ -0.28
CNN3-207ENST00000545882 JTBO76095 146 aa13.27□□□□□ -0.28
CNN3-207ENST00000545882 IGKV1D-12P01611 117 aa13.27□□□□□ -0.28
CNN3-207ENST00000545882 SPP1P10451 314 aa13.27□□□□□ -0.28
CNN3-207ENST00000545882 FGF5P12034 268 aa13.27□□□□□ -0.28
CNN3-207ENST00000545882 RPL35P42766 123 aaKnown RBP13.27□□□□□ -0.28
CNN3-207ENST00000545882 FAM3AP98173 230 aa13.27□□□□□ -0.28
CNN3-207ENST00000545882 RAB35Q15286 201 aa13.27□□□□□ -0.28
CNN3-207ENST00000545882 PMS2CLQ68D20 193 aa13.27□□□□□ -0.28
CNN3-207ENST00000545882 ZNF774Q6NX45 483 aa13.27□□□□□ -0.28
CNN3-207ENST00000545882 SPSB1Q96BD6 273 aa13.27□□□□□ -0.28
CNN3-207ENST00000545882 INTS12Q96CB8 462 aaKnown RBP13.27□□□□□ -0.28
CNN3-207ENST00000545882 REEP6Q96HR9 211 aa13.27□□□□□ -0.28
CNN3-207ENST00000545882 CMSS1Q9BQ75 279 aaKnown RBP13.27□□□□□ -0.28
CNN3-207ENST00000545882 SCRT1Q9BWW7 348 aa13.27□□□□□ -0.28
CNN3-207ENST00000545882 ZNF700Q9H0M5 742 aa13.27□□□□□ -0.28
CNN3-207ENST00000545882 WFDC1Q9HC57 220 aa13.27□□□□□ -0.28
CNN3-207ENST00000545882 SHANK1Q9Y566 2161 aa13.27□□□□□ -0.28
CNN3-207ENST00000545882 ZNF98A6NK75 572 aa13.27□□□□□ -0.29
CNN3-207ENST00000545882 SCGB1D2O95969 90 aa13.27□□□□□ -0.29
CNN3-207ENST00000545882 IFNA21P01568 189 aa13.27□□□□□ -0.29
CNN3-207ENST00000545882 OR5AC1P0C628 307 aa13.27□□□□□ -0.29
CNN3-207ENST00000545882 ZNF728P0DKX0 622 aa13.27□□□□□ -0.29
CNN3-207ENST00000545882 F2RL1P55085 397 aa13.27□□□□□ -0.29
CNN3-207ENST00000545882 RSU1Q15404 277 aa13.27□□□□□ -0.29
CNN3-207ENST00000545882 TSPO2Q5TGU0 170 aa13.27□□□□□ -0.29
CNN3-207ENST00000545882 BRICD5Q6PL45 260 aa13.27□□□□□ -0.29
CNN3-207ENST00000545882 Q6ZPA2 131 aa13.27□□□□□ -0.29
CNN3-207ENST00000545882 UBAC2Q8NBM4 344 aa13.27□□□□□ -0.29
CNN3-207ENST00000545882 GALNT14Q96FL9 552 aa13.27□□□□□ -0.29
CNN3-207ENST00000545882 KIRREL1Q96J84 757 aa13.27□□□□□ -0.29
CNN3-207ENST00000545882 JSRP1Q96MG2 331 aaPredicted RBP13.27□□□□□ -0.29
CNN3-207ENST00000545882 IER2Q9BTL4 223 aa13.27□□□□□ -0.29
CNN3-207ENST00000545882 NAA60Q9H7X0 242 aa13.27□□□□□ -0.29
CNN3-207ENST00000545882 NECAP2Q9NVZ3 263 aa13.27□□□□□ -0.29
CNN3-207ENST00000545882 COA4Q9NYJ1 87 aa13.27□□□□□ -0.29
CNN3-207ENST00000545882 PILRBQ9UKJ0 227 aa13.27□□□□□ -0.29
CNN3-207ENST00000545882 ZDHHC8Q9ULC8 765 aa13.27□□□□□ -0.29
CNN3-207ENST00000545882 CNTRLQ7Z7A1 2325 aa13.26□□□□□ -0.29
CNN3-207ENST00000545882 WDR87Q6ZQQ6 2873 aa13.26□□□□□ -0.29
CNN3-207ENST00000545882 SGCEO43556 437 aa13.26□□□□□ -0.29
CNN3-207ENST00000545882 KLF7O75840 302 aaPredicted RBP13.26□□□□□ -0.29
CNN3-207ENST00000545882 DTYMKP23919 212 aa13.26□□□□□ -0.29
CNN3-207ENST00000545882 DVL1P1P54792 670 aaPredicted RBP13.26□□□□□ -0.29
CNN3-207ENST00000545882 SMCO1Q147U7 214 aa13.26□□□□□ -0.29
CNN3-207ENST00000545882 KRTAP27-1Q3LI81 207 aa13.26□□□□□ -0.29
CNN3-207ENST00000545882 ZNF468Q5VIY5 522 aaPredicted RBP13.26□□□□□ -0.29
CNN3-207ENST00000545882 ETV3LQ6ZN32 361 aa13.26□□□□□ -0.29
CNN3-207ENST00000545882 LYZL2Q7Z4W2 148 aa13.26□□□□□ -0.29
CNN3-207ENST00000545882 TOMM40LQ969M1 308 aa13.26□□□□□ -0.29
CNN3-207ENST00000545882 PARP12Q9H0J9 701 aaKnown RBP13.26□□□□□ -0.29
CNN3-207ENST00000545882 PLEKHA2Q9HB19 425 aa13.26□□□□□ -0.29
CNN3-207ENST00000545882 CACFD1Q9UGQ2 172 aa13.26□□□□□ -0.29
CNN3-207ENST00000545882 DKKL1Q9UK85 242 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms