RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 GDPD3Q7L5L3 318 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 BCDIN3DQ7Z5W3 292 aaKnown RBP4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 C8orf59Q8N0T1 100 aaPredicted RBP4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 SIGLECL1Q8N7X8 197 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 ASCC1Q8N9N2 400 aaKnown RBP4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 CHST4Q8NCG5 386 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 OR13D1Q8NGV5 346 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 OR14K1Q8NGZ2 314 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 OR2G2Q8NGZ5 317 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 ANGPTL6Q8NI99 470 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 C8orf46Q8TAG6 207 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 TSEN15Q8WW01 171 aaKnown RBP4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 HPSE2Q8WWQ2 592 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 RORBQ92753 470 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 CREB3L1Q96BA8 519 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 SDSLQ96GA7 329 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 C4orf36Q96KX1 117 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 CEP19Q96LK0 163 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 GPER1Q99527 375 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 DCTN5Q9BTE1 182 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 JAM3Q9BX67 310 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 TTTY10Q9BZA0 68 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 SEBOXQ9HB31 216 aaPredicted RBP4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 BEX1Q9HBH7 125 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 RAB9BQ9NP90 201 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 GPR173Q9NS66 373 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 ACOXLQ9NUZ1 547 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 DCAF16Q9NXF7 216 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 ZNF319Q9P2F9 582 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 ERGIC3Q9Y282 383 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 EXOGQ9Y2C4 368 aaKnown RBP4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 KLHDC2Q9Y2U9 406 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 IGHV3OR15-7A0A075B7D8 119 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 IGHV1-69DA0A0B4J2H0 117 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 TRBV2A0A0J9YWF9 115 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 TMEM89A2RUT3 159 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 RFPL4AA6NLU0 287 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 C22orf46C9J442 243 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 RFPL4AL1F8VTS6 287 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 H0YHG0 523 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 M0R129 80 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 TNFRSF13BO14836 293 aaPredicted RBP4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 MYL12BO14950 172 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 ZNF780AO75290 641 aaPredicted RBP4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 PLATP00750 562 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 AVPP01185 164 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 IGHV1-69P01742 117 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 RBP4P02753 201 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 MT-ND2P03891 347 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 HCKP08631 526 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 PSG2P11465 335 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 EGR1P18146 543 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 RAB3AP20336 220 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 POLR2IP36954 125 aaKnown RBP4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 HSPA13P48723 471 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 OR12D2P58182 307 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 UBA52P62987 128 aaKnown RBP4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 PAX2Q02962 417 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 ZNF91Q05481 1191 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 MEF2CQ06413 473 aaPredicted RBP4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 MFGE8Q08431 387 aaPredicted RBP4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 DBPQ10586 325 aaPredicted RBP4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 GPR176Q14439 515 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 RCN1Q15293 331 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 MIDNQ504T8 468 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 TP53I3Q53FA7 332 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 OR52W1Q6IF63 320 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 RPL22L1Q6P5R6 122 aaKnown RBP4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 SHISA2Q6UWI4 295 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 LYPD2Q6UXB3 125 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 Q6ZSR3 168 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 VMO1Q7Z5L0 202 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 C11orf53Q8IXP5 236 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 SAXO1Q8IYX7 474 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 FAM185AQ8N0U4 392 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 FAM58AQ8N1B3 248 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 STX19Q8N4C7 294 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 FAM216BQ8N7L0 139 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 LY6G5BQ8NDX9 201 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 C19orf18Q8NEA5 215 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 OR5T2Q8NGG2 359 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 OR4F5Q8NH21 305 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 TRMT10AQ8TBZ6 339 aaKnown RBP4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 GPR148Q8TDV2 347 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 C22orf15Q8WYQ4 148 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 DYRK2Q92630 601 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 EMG1Q92979 244 aaKnown RBP4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 LHX4Q969G2 390 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 FOXRED1Q96CU9 486 aaPredicted RBP4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 LGALS12Q96DT0 336 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 TMEM80Q96HE8 168 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 SNX22Q96L94 193 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 OPALINQ96PE5 141 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 NRIP2Q9BQI9 281 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 GAL3ST2Q9H3Q3 398 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 ZCCHC4Q9H5U6 513 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 UNKLQ9H9P5 680 aaKnown RBP4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 SNTG1Q9NSN8 517 aa4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 MRPS18AQ9NVS2 196 aaKnown RBP4.64□□□□□ -1.67
CLSTN3-215ENST00000544584 ERVK13-1Q9NX77 482 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms