RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 ZP1P60852 638 aa12.13□□□□□ -0.47
TNFRSF1A-216ENST00000543995 SMIM21Q3B7S5 101 aa12.13□□□□□ -0.47
TNFRSF1A-216ENST00000543995 TEX36Q5VZQ5 186 aa12.13□□□□□ -0.47
TNFRSF1A-216ENST00000543995 GLT8D1Q68CQ7 371 aa12.13□□□□□ -0.47
TNFRSF1A-216ENST00000543995 CRIP3Q6Q6R5 217 aa12.13□□□□□ -0.47
TNFRSF1A-216ENST00000543995 ACP7Q6ZNF0 438 aa12.13□□□□□ -0.47
TNFRSF1A-216ENST00000543995 LRRTM1Q86UE6 522 aa12.13□□□□□ -0.47
TNFRSF1A-216ENST00000543995 OR5T2Q8NGG2 359 aa12.13□□□□□ -0.47
TNFRSF1A-216ENST00000543995 CLDND2Q8NHS1 167 aa12.13□□□□□ -0.47
TNFRSF1A-216ENST00000543995 YIPF6Q96EC8 236 aa12.13□□□□□ -0.47
TNFRSF1A-216ENST00000543995 NRIP2Q9BQI9 281 aa12.13□□□□□ -0.47
TNFRSF1A-216ENST00000543995 TMEM246Q9BRR3 403 aa12.13□□□□□ -0.47
TNFRSF1A-216ENST00000543995 RASL12Q9NYN1 266 aa12.13□□□□□ -0.47
TNFRSF1A-216ENST00000543995 AK6Q9Y3D8 172 aaKnown RBP12.13□□□□□ -0.47
TNFRSF1A-216ENST00000543995 VPS13CQ709C8 3753 aa12.13□□□□□ -0.47
TNFRSF1A-216ENST00000543995 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF1A-216ENST00000543995 AIREO43918 545 aa12.12□□□□□ -0.47
TNFRSF1A-216ENST00000543995 NOS1APO75052 506 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF1A-216ENST00000543995 FSTL3O95633 263 aa12.12□□□□□ -0.47
TNFRSF1A-216ENST00000543995 GYPAP02724 150 aa12.12□□□□□ -0.47
TNFRSF1A-216ENST00000543995 ACAA1P09110 424 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF1A-216ENST00000543995 ADRA2CP18825 462 aa12.12□□□□□ -0.47
TNFRSF1A-216ENST00000543995 PTGFRP43088 359 aa12.12□□□□□ -0.47
TNFRSF1A-216ENST00000543995 LOXL1Q08397 574 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF1A-216ENST00000543995 RSU1Q15404 277 aa12.12□□□□□ -0.47
TNFRSF1A-216ENST00000543995 DCDC5Q6ZRR9 648 aa12.12□□□□□ -0.47
TNFRSF1A-216ENST00000543995 GPR141Q7Z602 305 aa12.12□□□□□ -0.47
TNFRSF1A-216ENST00000543995 FAM90A1Q86YD7 464 aa12.12□□□□□ -0.47
TNFRSF1A-216ENST00000543995 CDH26Q8IXH8 852 aa12.12□□□□□ -0.47
TNFRSF1A-216ENST00000543995 Q8IYB0 196 aa12.12□□□□□ -0.47
TNFRSF1A-216ENST00000543995 SAXO1Q8IYX7 474 aa12.12□□□□□ -0.47
TNFRSF1A-216ENST00000543995 CIARTQ8N365 385 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF1A-216ENST00000543995 ZSCAN4Q8NAM6 433 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF1A-216ENST00000543995 OR13F1Q8NGS4 319 aa12.12□□□□□ -0.47
TNFRSF1A-216ENST00000543995 EMG1Q92979 244 aaKnown RBP12.12□□□□□ -0.47
TNFRSF1A-216ENST00000543995 FOXRED1Q96CU9 486 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF1A-216ENST00000543995 CNTD2Q9H8S5 307 aa12.12□□□□□ -0.47
TNFRSF1A-216ENST00000543995 RBFOX1Q9NWB1 397 aaKnown RBP12.12□□□□□ -0.47
TNFRSF1A-216ENST00000543995 NLKQ9UBE8 527 aa12.12□□□□□ -0.47
TNFRSF1A-216ENST00000543995 ING4Q9UNL4 249 aa12.12□□□□□ -0.47
TNFRSF1A-216ENST00000543995 CR1P17927 2039 aa12.12□□□□□ -0.47
TNFRSF1A-216ENST00000543995 TRAV1-2A0A0B4J238 106 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 IGKV1-12A0A0C4DH73 117 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 OR2AT4A6NND4 320 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 PDCD5O14737 125 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 CDRT1O95170 752 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 IGKV1D-12P01611 117 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 TFAP2AP05549 437 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 CALCBP10092 127 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 RPS2P15880 293 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 NPBWR2P48146 333 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 AWAT2Q6E213 333 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 FIP1L1Q6UN15 594 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 PXT1Q8NFP0 134 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 C12orf43Q96C57 262 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 RAB39BQ96DA2 213 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 KCTD7Q96MP8 289 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 UQCC2Q9BRT2 126 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 FUNDC2Q9BWH2 189 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 ZNF665Q9H7R5 613 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 MIOXQ9UGB7 285 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 MYO9AB2RTY4 2548 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 A0A096LNT2 108 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 CEACAM18A8MTB9 384 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 F8VVB4 439 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 F8VWA3 439 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 ADAM20O43506 726 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 NDUFA2O43678 99 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 KDM4BO94953 1096 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 PRKACAP17612 351 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 IL2RGP31785 369 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 GABRA2P47869 451 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 ALDH3B2P48448 385 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 SNU13P55769 128 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 ERVK11-1P61568 191 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 LYPD2Q6UXB3 125 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 GDPGP1Q6ZNW5 385 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 NLRC3Q7RTR2 1065 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 C1QL2Q7Z5L3 287 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 FAM58AQ8N1B3 248 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 OR4D6Q8NGJ1 314 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 CENPOQ9BU64 300 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 METTL9Q9H1A3 318 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 RNF167Q9H6Y7 350 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 PLGRKTQ9HBL7 147 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 HES4Q9HCC6 221 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 OR14J1Q9UGF5 321 aa12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 MRPS28Q9Y2Q9 187 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-216ENST00000543995 SHISA3A0PJX4 238 aa12.1□□□□□ -0.47
TNFRSF1A-216ENST00000543995 TMPRSS2O15393 492 aa12.1□□□□□ -0.47
TNFRSF1A-216ENST00000543995 HTR3BO95264 441 aa12.1□□□□□ -0.47
TNFRSF1A-216ENST00000543995 IGHV2-5P01817 119 aa12.1□□□□□ -0.47
TNFRSF1A-216ENST00000543995 CSTBP04080 98 aaKnown RBP12.1□□□□□ -0.47
TNFRSF1A-216ENST00000543995 SFTPBP07988 381 aa12.1□□□□□ -0.47
TNFRSF1A-216ENST00000543995 CD99P14209 185 aa12.1□□□□□ -0.47
TNFRSF1A-216ENST00000543995 RAB3BP20337 219 aa12.1□□□□□ -0.47
TNFRSF1A-216ENST00000543995 SERPINA2P20848 420 aa12.1□□□□□ -0.47
TNFRSF1A-216ENST00000543995 RPL5P46777 297 aaKnown RBP12.1□□□□□ -0.47
TNFRSF1A-216ENST00000543995 PSMD7P51665 324 aa12.1□□□□□ -0.47
TNFRSF1A-216ENST00000543995 LSM3P62310 102 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms