RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 PIPOXQ9P0Z9 390 aa14.81□□□□□ -0.04
TMEM50B-210ENST00000542230 ZNF107Q9UII5 783 aaPredicted RBP14.81□□□□□ -0.04
TMEM50B-210ENST00000542230 SCP2D1Q9UJQ7 156 aa14.81□□□□□ -0.04
TMEM50B-210ENST00000542230 ANAPC10Q9UM13 185 aa14.81□□□□□ -0.04
TMEM50B-210ENST00000542230 ST3GAL6Q9Y274 331 aa14.81□□□□□ -0.04
TMEM50B-210ENST00000542230 ICE1Q9Y2F5 2266 aa14.81□□□□□ -0.04
TMEM50B-210ENST00000542230 BCL3P20749 454 aa14.8□□□□□ -0.04
TMEM50B-210ENST00000542230 CA6P23280 308 aa14.8□□□□□ -0.04
TMEM50B-210ENST00000542230 RBMXP38159 391 aaKnown RBP14.8□□□□□ -0.04
TMEM50B-210ENST00000542230 PNLIPRP3Q17RR3 467 aa14.8□□□□□ -0.04
TMEM50B-210ENST00000542230 ZDHHC23Q8IYP9 409 aa14.8□□□□□ -0.04
TMEM50B-210ENST00000542230 ADAD2Q8NCV1 583 aaKnown RBP14.8□□□□□ -0.04
TMEM50B-210ENST00000542230 OR6K3Q8NGY3 331 aa14.8□□□□□ -0.04
TMEM50B-210ENST00000542230 MED30Q96HR3 178 aa14.8□□□□□ -0.04
TMEM50B-210ENST00000542230 GPR137Q96N19 417 aa14.8□□□□□ -0.04
TMEM50B-210ENST00000542230 MICU1Q9BPX6 476 aa14.8□□□□□ -0.04
TMEM50B-210ENST00000542230 PLSCR4Q9NRQ2 329 aa14.8□□□□□ -0.04
TMEM50B-210ENST00000542230 ZNF701Q9NV72 531 aaPredicted RBP14.8□□□□□ -0.04
TMEM50B-210ENST00000542230 SHANK1Q9Y566 2161 aa14.8□□□□□ -0.04
TMEM50B-210ENST00000542230 DISC1C4P0D8 188 aa14.8□□□□□ -0.04
TMEM50B-210ENST00000542230 SYNGR1O43759 233 aa14.8□□□□□ -0.04
TMEM50B-210ENST00000542230 OR4E1P0C645 316 aa14.8□□□□□ -0.04
TMEM50B-210ENST00000542230 NAT1P18440 290 aa14.8□□□□□ -0.04
TMEM50B-210ENST00000542230 COX5AP20674 150 aa14.8□□□□□ -0.04
TMEM50B-210ENST00000542230 OPRM1P35372 400 aa14.8□□□□□ -0.04
TMEM50B-210ENST00000542230 MEF2DQ14814 521 aa14.8□□□□□ -0.04
TMEM50B-210ENST00000542230 CDK10Q15131 360 aa14.8□□□□□ -0.04
TMEM50B-210ENST00000542230 CEACAM21Q3KPI0 293 aa14.8□□□□□ -0.04
TMEM50B-210ENST00000542230 ALKBH2Q6NS38 261 aa14.8□□□□□ -0.04
TMEM50B-210ENST00000542230 RPUSD3Q6P087 351 aaKnown RBP14.8□□□□□ -0.04
TMEM50B-210ENST00000542230 OSR2Q8N2R0 312 aa14.8□□□□□ -0.04
TMEM50B-210ENST00000542230 AK3Q9UIJ7 227 aa14.8□□□□□ -0.04
TMEM50B-210ENST00000542230 MKRN2OSH3BPM6 223 aa14.79□□□□□ -0.04
TMEM50B-210ENST00000542230 SMPD2O60906 423 aa14.79□□□□□ -0.04
TMEM50B-210ENST00000542230 CST4P01036 141 aa14.79□□□□□ -0.04
TMEM50B-210ENST00000542230 PI3P19957 117 aa14.79□□□□□ -0.04
TMEM50B-210ENST00000542230 H2BFSP57053 126 aa14.79□□□□□ -0.04
TMEM50B-210ENST00000542230 TBC1D28Q2M2D7 210 aa14.79□□□□□ -0.04
TMEM50B-210ENST00000542230 DCAF12L2Q5VW00 463 aa14.79□□□□□ -0.04
TMEM50B-210ENST00000542230 C5orf24Q7Z6I8 188 aa14.79□□□□□ -0.04
TMEM50B-210ENST00000542230 LIX1LQ8IVB5 337 aa14.79□□□□□ -0.04
TMEM50B-210ENST00000542230 OR2T35Q8NGX2 323 aa14.79□□□□□ -0.04
TMEM50B-210ENST00000542230 MARCH1Q8TCQ1 289 aa14.79□□□□□ -0.04
TMEM50B-210ENST00000542230 EMG1Q92979 244 aaKnown RBP14.79□□□□□ -0.04
TMEM50B-210ENST00000542230 MTCH1Q9NZJ7 389 aa14.79□□□□□ -0.04
TMEM50B-210ENST00000542230 ARID1AO14497 2285 aa14.79□□□□□ -0.04
TMEM50B-210ENST00000542230 UBE2QL1A1L167 161 aa14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 WDR1O75083 606 aa14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 SELEP16581 610 aa14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 AMY2BP19961 511 aa14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 CHATP28329 748 aa14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 DUSP1P28562 367 aa14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 ERP29P30040 261 aaKnown RBP14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 NPY4RP50391 375 aa14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 BAMBIQ13145 260 aa14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 ZBTB37Q5TC79 503 aa14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 Q6ZPA2 131 aa14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 HOGA1Q86XE5 327 aa14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 PXT1Q8NFP0 134 aa14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 SLC25A21Q9BQT8 299 aaPredicted RBP14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 MGAT4AQ9UM21 535 aa14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 PLEKHA6Q9Y2H5 1048 aa14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 HSPB11Q9Y547 144 aa14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 NPTNQ9Y639 398 aa14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 MBD3L4A6NDZ8 208 aaPredicted RBP14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 MBD3L3A6NE82 208 aaPredicted RBP14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 MBD3L5A6NJ08 208 aaPredicted RBP14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 SNRPGP15A8MWD9 76 aa14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 ATP6V1G1O75348 118 aa14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 CISD2Q8N5K1 135 aaKnown RBP14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 Q8NA96 180 aa14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 CSNK2A3Q8NEV1 391 aa14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 MBD3L2Q8NHZ7 208 aaPredicted RBP14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 ZFAND1Q8TCF1 268 aa14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 PRRT1Q99946 306 aa14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 GPN1Q9HCN4 374 aaPredicted RBP14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 SLC2A8Q9NY64 477 aa14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 PAIP2BQ9ULR5 123 aaKnown RBP14.78□□□□□ -0.04
TMEM50B-210ENST00000542230 FAM172BPA6NC97 362 aa14.77□□□□□ -0.04
TMEM50B-210ENST00000542230 IFNA6P05013 189 aa14.77□□□□□ -0.04
TMEM50B-210ENST00000542230 PPP1CBP62140 327 aa14.77□□□□□ -0.04
TMEM50B-210ENST00000542230 DHRS2Q13268 280 aa14.77□□□□□ -0.04
TMEM50B-210ENST00000542230 TBR1Q16650 682 aa14.77□□□□□ -0.04
TMEM50B-210ENST00000542230 OR2A2Q6IF42 318 aa14.77□□□□□ -0.04
TMEM50B-210ENST00000542230 NCCRP1Q6ZVX7 275 aaPredicted RBP14.77□□□□□ -0.04
TMEM50B-210ENST00000542230 C9orf62Q8N4C0 152 aa14.77□□□□□ -0.04
TMEM50B-210ENST00000542230 OR5P3Q8WZ94 311 aa14.77□□□□□ -0.04
TMEM50B-210ENST00000542230 PIEZO1Q92508 2521 aa14.77□□□□□ -0.04
TMEM50B-210ENST00000542230 ROS1P08922 2347 aa14.77□□□□□ -0.05
TMEM50B-210ENST00000542230 SERPINE3A8MV23 424 aa14.77□□□□□ -0.05
TMEM50B-210ENST00000542230 MPV17P39210 176 aa14.77□□□□□ -0.05
TMEM50B-210ENST00000542230 HOXA4Q00056 320 aaPredicted RBP14.77□□□□□ -0.05
TMEM50B-210ENST00000542230 LIN54Q6MZP7 749 aa14.77□□□□□ -0.05
TMEM50B-210ENST00000542230 HAGHLQ6PII5 290 aaPredicted RBP14.77□□□□□ -0.05
TMEM50B-210ENST00000542230 DPPA2Q7Z7J5 298 aa14.77□□□□□ -0.05
TMEM50B-210ENST00000542230 OR13G1Q8NGZ3 307 aa14.77□□□□□ -0.05
TMEM50B-210ENST00000542230 SLC25A40Q8TBP6 338 aa14.77□□□□□ -0.05
TMEM50B-210ENST00000542230 CDH20Q9HBT6 801 aa14.77□□□□□ -0.05
TMEM50B-210ENST00000542230 FZR1Q9UM11 496 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms