RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 RASL11BQ9BPW5 248 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 RSRP1Q9BUV0 290 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 CES1P1Q9UKY3 287 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 PLPP1O14494 284 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 FABP5Q01469 135 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 CIRBPQ14011 172 aaKnown RBP13.79□□□□□ -0.2
HMGA2-210ENST00000541363 FBXO46Q6PJ61 603 aaPredicted RBP13.79□□□□□ -0.2
HMGA2-210ENST00000541363 COL25A1Q9BXS0 654 aaPredicted RBP13.79□□□□□ -0.2
HMGA2-210ENST00000541363 C11orf68Q9H3H3 251 aaKnown RBP13.79□□□□□ -0.2
HMGA2-210ENST00000541363 C3orf85A0A1B0GTC6 90 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 HMGN4O00479 90 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 NGFP01138 241 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 JOSD1Q15040 202 aaPredicted RBP13.79□□□□□ -0.2
HMGA2-210ENST00000541363 NHLRC1Q6VVB1 395 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 ERASQ7Z444 233 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 PRSS42Q7Z5A4 293 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 CXorf67Q86X51 503 aaPredicted RBP13.79□□□□□ -0.2
HMGA2-210ENST00000541363 ZNF683Q8IZ20 524 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 RPS4Y2Q8TD47 263 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 FLYWCH2Q96CP2 140 aaKnown RBP13.79□□□□□ -0.2
HMGA2-210ENST00000541363 RAB1BQ9H0U4 201 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 IFT172Q9UG01 1749 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 CD27P26842 260 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 PKIAP61925 76 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 PRDM7Q9NQW5 492 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 OR3A4PP47883 348 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 CLDN10P78369 228 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 SLCO1C1Q9NYB5 712 aa13.79□□□□□ -0.2
HMGA2-210ENST00000541363 DLK2Q6UY11 383 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 ACER3Q9NUN7 267 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 NUP205Q92621 2012 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 DEFB108AA8MXU0 73 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 RAB29O14966 203 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 HERPUD1Q15011 391 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 CDK5R1Q15078 307 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 SPINK9Q5DT21 86 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 DNLZQ5SXM8 178 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 BVESQ8NE79 360 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 LINC00052Q96N35 136 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 C19orf53Q9UNZ5 99 aaPredicted RBP13.78□□□□□ -0.2
HMGA2-210ENST00000541363 HS3ST2Q9Y278 367 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 BRS3P32247 399 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 TWIST1Q15672 202 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 ZNF77Q15935 545 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 KHDC3LQ587J8 217 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 ABHD14AQ9BUJ0 271 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 PYCARD-AS1I3L0S3 204 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 GSG1Q2KHT4 349 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 ARL6IP6Q8N6S5 226 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 SNRNP40Q96DI7 357 aaKnown RBP13.78□□□□□ -0.2
HMGA2-210ENST00000541363 PSG11Q9UQ72 335 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 LOC389332A0A1B0GUA5 103 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 ZNF815PA8K554 130 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 CBR3O75828 277 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 ACTL6AO96019 429 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 FAHP16930 419 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 SLC37A1P57057 533 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 IL13RA2Q14627 380 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 DPPA3Q6W0C5 159 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 LINC00469Q8N7U9 141 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 PIPOXQ9P0Z9 390 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 LPAR3Q9UBY5 353 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 GSTZ1O43708 216 aaPredicted RBP13.78□□□□□ -0.2
HMGA2-210ENST00000541363 SLC25A30Q5SVS4 291 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 GLDNQ6ZMI3 551 aaPredicted RBP13.78□□□□□ -0.2
HMGA2-210ENST00000541363 OR1F12Q8NHA8 337 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 VSIG4Q9Y279 399 aa13.78□□□□□ -0.2
HMGA2-210ENST00000541363 CICQ96RK0 1608 aaPredicted RBP13.78□□□□□ -0.2
HMGA2-210ENST00000541363 TAS1R1Q7RTX1 841 aa13.77□□□□□ -0.2
HMGA2-210ENST00000541363 VN1R2Q8NFZ6 395 aa13.77□□□□□ -0.2
HMGA2-210ENST00000541363 OR4C3Q8NH37 302 aa13.77□□□□□ -0.2
HMGA2-210ENST00000541363 MCHR2Q969V1 340 aa13.77□□□□□ -0.2
HMGA2-210ENST00000541363 B4DEV8 164 aa13.77□□□□□ -0.2
HMGA2-210ENST00000541363 TMEM189-UBE2V1I3L0A0 370 aa13.77□□□□□ -0.2
HMGA2-210ENST00000541363 MBPP02686 304 aaPredicted RBP13.77□□□□□ -0.2
HMGA2-210ENST00000541363 SPANXN1Q5VSR9 72 aa13.77□□□□□ -0.2
HMGA2-210ENST00000541363 GNG7O60262 68 aa13.77□□□□□ -0.2
HMGA2-210ENST00000541363 HLA-GP17693 338 aa13.77□□□□□ -0.2
HMGA2-210ENST00000541363 TNXAQ16473 311 aa13.77□□□□□ -0.2
HMGA2-210ENST00000541363 DSCR4P56555 118 aaPredicted RBP13.77□□□□□ -0.21
HMGA2-210ENST00000541363 SPSB1Q96BD6 273 aa13.77□□□□□ -0.21
HMGA2-210ENST00000541363 hADV38S2A0JD32 116 aa13.77□□□□□ -0.21
HMGA2-210ENST00000541363 RBFOX3A6NFN3 312 aa13.77□□□□□ -0.21
HMGA2-210ENST00000541363 HLA-DRB3P79483 266 aa13.77□□□□□ -0.21
HMGA2-210ENST00000541363 FUT7Q11130 342 aa13.77□□□□□ -0.21
HMGA2-210ENST00000541363 FAM74A3Q4VXF1 159 aa13.77□□□□□ -0.21
HMGA2-210ENST00000541363 SYT8Q8NBV8 401 aa13.77□□□□□ -0.21
HMGA2-210ENST00000541363 FBXL17Q9UF56 701 aa13.77□□□□□ -0.21
HMGA2-210ENST00000541363 PPT2Q9UMR5 302 aa13.77□□□□□ -0.21
HMGA2-210ENST00000541363 KCNMB2Q9Y691 235 aa13.77□□□□□ -0.21
HMGA2-210ENST00000541363 SHISA7A6NL88 538 aa13.77□□□□□ -0.21
HMGA2-210ENST00000541363 IDSB3KWA1 339 aa13.77□□□□□ -0.21
HMGA2-210ENST00000541363 CXCL13O43927 109 aa13.77□□□□□ -0.21
HMGA2-210ENST00000541363 GPX5O75715 221 aa13.77□□□□□ -0.21
HMGA2-210ENST00000541363 DYNLT3P51808 116 aa13.77□□□□□ -0.21
HMGA2-210ENST00000541363 SP6Q3SY56 376 aa13.77□□□□□ -0.21
HMGA2-210ENST00000541363 POMT2Q9UKY4 750 aa13.77□□□□□ -0.21
HMGA2-210ENST00000541363 PAM16Q9Y3D7 125 aa13.77□□□□□ -0.21
HMGA2-210ENST00000541363 ZXDAP98168 799 aa13.77□□□□□ -0.21
HMGA2-210ENST00000541363 IGSF11Q5DX21 431 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms