RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 FPR2P25090 351 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 IKZF1Q13422 519 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 CDK5R1Q15078 307 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 RPL22L1Q6P5R6 122 aaKnown RBP10.83□□□□□ -0.68
LTBR-208ENST00000541005 TMPRSS11AQ6ZMR5 421 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 ANGPTL5Q86XS5 388 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 BPIFB2Q8N4F0 458 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 PARP16Q8N5Y8 322 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 KIR3DL3Q8N743 410 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 ZNF485Q8NCK3 441 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 OR13C3Q8NGS6 347 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 OR52N1Q8NH53 320 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 OR5AK2Q8NH90 309 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 SPATA3Q8NHX4 192 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 NPRL2Q8WTW4 380 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 FGGYQ96C11 551 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 BORCS8Q96FH0 119 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 TMEM80Q96HE8 168 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 ZNF488Q96MN9 340 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 TBX15Q96SF7 602 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 DCTN5Q9BTE1 182 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 COMMD4Q9H0A8 199 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 SIRPDQ9H106 197 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 FKBP14Q9NWM8 211 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 SLC25A10Q9UBX3 287 aaPredicted RBP10.83□□□□□ -0.68
LTBR-208ENST00000541005 PSORS1C1Q9UIG5 152 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 MAB21L2Q9Y586 359 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 KPTNQ9Y664 436 aa10.83□□□□□ -0.68
LTBR-208ENST00000541005 TRAV40A0A0B4J280 105 aa10.82□□□□□ -0.68
LTBR-208ENST00000541005 NXPH2O95156 264 aa10.82□□□□□ -0.68
LTBR-208ENST00000541005 VENTXO95231 258 aa10.82□□□□□ -0.68
LTBR-208ENST00000541005 KNG1P01042 644 aa10.82□□□□□ -0.68
LTBR-208ENST00000541005 AZGP1P25311 298 aaKnown RBP10.82□□□□□ -0.68
LTBR-208ENST00000541005 RBP2P50120 134 aa10.82□□□□□ -0.68
LTBR-208ENST00000541005 GTF2A1P52655 376 aaPredicted RBP10.82□□□□□ -0.68
LTBR-208ENST00000541005 AQP4P55087 323 aa10.82□□□□□ -0.68
LTBR-208ENST00000541005 BPIFB3P59826 476 aa10.82□□□□□ -0.68
LTBR-208ENST00000541005 ST3GAL4Q11206 333 aa10.82□□□□□ -0.68
LTBR-208ENST00000541005 MED21Q13503 144 aa10.82□□□□□ -0.68
LTBR-208ENST00000541005 OR2G6Q5TZ20 316 aa10.82□□□□□ -0.68
LTBR-208ENST00000541005 XAF1Q6GPH4 301 aa10.82□□□□□ -0.68
LTBR-208ENST00000541005 LHFPL2Q6ZUX7 228 aa10.82□□□□□ -0.68
LTBR-208ENST00000541005 PHC2Q8IXK0 858 aa10.82□□□□□ -0.68
LTBR-208ENST00000541005 ZNF561Q8N587 486 aa10.82□□□□□ -0.68
LTBR-208ENST00000541005 CD177Q8N6Q3 437 aa10.82□□□□□ -0.68
LTBR-208ENST00000541005 RGP1Q92546 391 aaPredicted RBP10.82□□□□□ -0.68
LTBR-208ENST00000541005 GGHQ92820 318 aa10.82□□□□□ -0.68
LTBR-208ENST00000541005 CEP19Q96LK0 163 aa10.82□□□□□ -0.68
LTBR-208ENST00000541005 WDFY2Q96P53 400 aa10.82□□□□□ -0.68
LTBR-208ENST00000541005 OPALINQ96PE5 141 aa10.82□□□□□ -0.68
LTBR-208ENST00000541005 JMJD8Q96S16 334 aa10.82□□□□□ -0.68
LTBR-208ENST00000541005 PDCD1LG2Q9BQ51 273 aa10.82□□□□□ -0.68
LTBR-208ENST00000541005 SEBOXQ9HB31 216 aaPredicted RBP10.82□□□□□ -0.68
LTBR-208ENST00000541005 ZNF69Q9UC07 566 aa10.82□□□□□ -0.68
LTBR-208ENST00000541005 TRBV23-1A0A0A0MS06 115 aa10.81□□□□□ -0.68
LTBR-208ENST00000541005 TRBV2A0A0J9YWF9 115 aa10.81□□□□□ -0.68
LTBR-208ENST00000541005 RFPL4AA6NLU0 287 aa10.81□□□□□ -0.68
LTBR-208ENST00000541005 RFPL4AL1F8VTS6 287 aa10.81□□□□□ -0.68
LTBR-208ENST00000541005 OGG1O15527 345 aa10.81□□□□□ -0.68
LTBR-208ENST00000541005 TOX4O94842 621 aa10.81□□□□□ -0.68
LTBR-208ENST00000541005 TFF1P04155 84 aa10.81□□□□□ -0.68
LTBR-208ENST00000541005 SFTPBP07988 381 aa10.81□□□□□ -0.68
LTBR-208ENST00000541005 GABRA2P47869 451 aa10.81□□□□□ -0.68
LTBR-208ENST00000541005 ATP1B3P54709 279 aa10.81□□□□□ -0.68
LTBR-208ENST00000541005 SRSF2Q01130 221 aaKnown RBP10.81□□□□□ -0.68
LTBR-208ENST00000541005 METTL11BQ5VVY1 283 aa10.81□□□□□ -0.68
LTBR-208ENST00000541005 ZNF529Q6P280 563 aa10.81□□□□□ -0.68
LTBR-208ENST00000541005 SLC25A26Q70HW3 274 aa10.81□□□□□ -0.68
LTBR-208ENST00000541005 Q8IYB0 196 aa10.81□□□□□ -0.68
LTBR-208ENST00000541005 SMIM19Q96E16 107 aa10.81□□□□□ -0.68
LTBR-208ENST00000541005 C19orf24Q9BVV8 132 aa10.81□□□□□ -0.68
LTBR-208ENST00000541005 FAM234AQ9H0X4 552 aa10.81□□□□□ -0.68
LTBR-208ENST00000541005 ZCCHC4Q9H5U6 513 aa10.81□□□□□ -0.68
LTBR-208ENST00000541005 CNTD2Q9H8S5 307 aa10.81□□□□□ -0.68
LTBR-208ENST00000541005 BABAM2Q9NXR7 383 aa10.81□□□□□ -0.68
LTBR-208ENST00000541005 MTCH1Q9NZJ7 389 aa10.81□□□□□ -0.68
LTBR-208ENST00000541005 CLEC2DQ9UHP7 191 aa10.81□□□□□ -0.68
LTBR-208ENST00000541005 F8VVB4 439 aa10.8□□□□□ -0.68
LTBR-208ENST00000541005 F8VWA3 439 aa10.8□□□□□ -0.68
LTBR-208ENST00000541005 XPNPEP2O43895 674 aa10.8□□□□□ -0.68
LTBR-208ENST00000541005 PRDX2P32119 198 aa10.8□□□□□ -0.68
LTBR-208ENST00000541005 MTCP1P56278 107 aa10.8□□□□□ -0.68
LTBR-208ENST00000541005 PDCD1Q15116 288 aa10.8□□□□□ -0.68
LTBR-208ENST00000541005 GPR157Q5UAW9 335 aa10.8□□□□□ -0.68
LTBR-208ENST00000541005 CRIP3Q6Q6R5 217 aa10.8□□□□□ -0.68
LTBR-208ENST00000541005 METAP1DQ6UB28 335 aaPredicted RBP10.8□□□□□ -0.68
LTBR-208ENST00000541005 C1orf122Q6ZSJ8 110 aa10.8□□□□□ -0.68
LTBR-208ENST00000541005 SERPINA12Q8IW75 414 aa10.8□□□□□ -0.68
LTBR-208ENST00000541005 MKXQ8IYA7 352 aa10.8□□□□□ -0.68
LTBR-208ENST00000541005 ZNRF1Q8ND25 227 aa10.8□□□□□ -0.68
LTBR-208ENST00000541005 TMEM185AQ8NFB2 350 aa10.8□□□□□ -0.68
LTBR-208ENST00000541005 OR5D14Q8NGL3 314 aa10.8□□□□□ -0.68
LTBR-208ENST00000541005 OR13C9Q8NGT0 318 aa10.8□□□□□ -0.68
LTBR-208ENST00000541005 PCGF1Q9BSM1 259 aa10.8□□□□□ -0.68
LTBR-208ENST00000541005 VCX3BQ9H321 246 aa10.8□□□□□ -0.68
LTBR-208ENST00000541005 NEK6Q9HC98 313 aa10.8□□□□□ -0.68
LTBR-208ENST00000541005 ESM1Q9NQ30 184 aa10.8□□□□□ -0.68
LTBR-208ENST00000541005 CHCHD3Q9NX63 227 aaKnown RBP10.8□□□□□ -0.68
LTBR-208ENST00000541005 DHDHQ9UQ10 334 aa10.8□□□□□ -0.68
LTBR-208ENST00000541005 SIRT4Q9Y6E7 314 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms