RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 HDHD3Q9BSH5 251 aaPredicted RBP3.41□□□□□ -1.86
YBX3-210ENST00000540975 C20orf24Q9BUV8 137 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 GGACTQ9BVM4 153 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 ULBP1Q9BZM6 244 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 NXF5Q9H1B4 397 aaKnown RBP3.41□□□□□ -1.86
YBX3-210ENST00000540975 C20orf85Q9H1P6 137 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 TMEM38AQ9H6F2 299 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 BIN3Q9NQY0 253 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 ZNF282Q9UDV7 671 aaPredicted RBP3.41□□□□□ -1.86
YBX3-210ENST00000540975 GLS2Q9UI32 602 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 SNX24Q9Y343 169 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 ZNF337Q9Y3M9 751 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 RGPD1P0DJD0 1748 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 TRPM3Q9HCF6 1732 aaPredicted RBP3.41□□□□□ -1.86
YBX3-210ENST00000540975 LRP5O75197 1615 aa3.41□□□□□ -1.86
YBX3-210ENST00000540975 NFAT5O94916 1531 aa3.4□□□□□ -1.86
YBX3-210ENST00000540975 KIF13AQ9H1H9 1805 aa3.4□□□□□ -1.86
YBX3-210ENST00000540975 KCNE1BA0A087WTH5 132 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 CCDC160A6NGH7 325 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 ZNF99A8MXY4 864 aaPredicted RBP3.4□□□□□ -1.87
YBX3-210ENST00000540975 K7EP13 123 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 M0QXV9 152 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 PSMD12O00232 456 aaPredicted RBP3.4□□□□□ -1.87
YBX3-210ENST00000540975 CDC7O00311 574 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 PHYHO14832 338 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 SIVA1O15304 175 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 OR1F1O43749 312 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 FADS1O60427 444 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 FOXH1O75593 365 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 SCELO95171 688 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 TNFAIP8O95379 198 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 AP2A1O95782 977 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 FADS2O95864 444 aaKnown RBP3.4□□□□□ -1.87
YBX3-210ENST00000540975 SERPINE2P07093 398 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 SCGB1A1P11684 91 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 PGAM1P18669 254 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 UQCRC2P22695 453 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 PAX6P26367 422 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 KDELR2P33947 212 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 CA5AP35218 305 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 GABRA4P48169 554 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 ACOT2P49753 483 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 RBP2P50120 134 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 PPT1P50897 306 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 IDH3GP51553 393 aaPredicted RBP3.4□□□□□ -1.87
YBX3-210ENST00000540975 AQP4P55087 323 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 DLX1P56177 255 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 RPS14P62263 151 aaKnown RBP3.4□□□□□ -1.87
YBX3-210ENST00000540975 OGDHQ02218 1023 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 KLRC3Q07444 240 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 AESQ08117 197 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 MED21Q13503 144 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 OR4D1Q15615 310 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 TRMT5Q32P41 509 aaKnown RBP3.4□□□□□ -1.87
YBX3-210ENST00000540975 ZBED5Q49AG3 693 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 TRIQKQ629K1 86 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 LPCAT3Q6P1A2 487 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 SPNS3Q6ZMD2 512 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 ZNF621Q6ZSS3 439 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 ADAMTS13Q76LX8 1427 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 SCD5Q86SK9 330 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 DHDDSQ86SQ9 333 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 ACOT1Q86TX2 421 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 CRLF3Q8IUI8 442 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 NALCNQ8IZF0 1738 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 GABRG1Q8N1C3 465 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 HSD17B11Q8NBQ5 300 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 PXT1Q8NFP0 134 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 OR10G3Q8NGC4 313 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 OR51D1Q8NGF3 324 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 OR8J3Q8NGG0 315 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 NUBPLQ8TB37 319 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 ARPC1AQ92747 370 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 PAGE5Q96GU1 130 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 TMEM56Q96MV1 263 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 RTBDNQ9BSG5 229 aaPredicted RBP3.4□□□□□ -1.87
YBX3-210ENST00000540975 C1orf198Q9H425 327 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 TMEM138Q9NPI0 162 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 NIT2Q9NQR4 276 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 SIRT7Q9NRC8 400 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 LYARQ9NX58 379 aaKnown RBP3.4□□□□□ -1.87
YBX3-210ENST00000540975 SIGLEC8Q9NYZ4 499 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 GSKIPQ9P0R6 139 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 DKKL1Q9UK85 242 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 PITPNC1Q9UKF7 332 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 PIGLQ9Y2B2 252 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.4□□□□□ -1.87
YBX3-210ENST00000540975 OR51B4Q9Y5P0 310 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 TMEM56-RWDD3S4R434 201 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 ABCB11O95342 1321 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 ADGRA3Q8IWK6 1321 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 ZNF532Q9HCE3 1301 aa3.4□□□□□ -1.87
YBX3-210ENST00000540975 IGHV1OR21-1A0A087WYE8 117 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 A0A0G2JLM5 398 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 A0A0G2JN53 185 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 A0A1B0GUS0 222 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 SMCO3A2RU48 225 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 C11orf94C9JXX5 98 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 G3V2T6 193 aa3.39□□□□□ -1.87
YBX3-210ENST00000540975 H3BSA7 217 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms