RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 ARL11Q969Q4 196 aa8.36□□□□□ -1.07
TTC39C-203ENST00000540918 RABL2AQ9UBK7 228 aaPredicted RBP8.36□□□□□ -1.07
TTC39C-203ENST00000540918 NDRG3Q9UGV2 375 aa8.36□□□□□ -1.07
TTC39C-203ENST00000540918 CYB5R1Q9UHQ9 305 aa8.36□□□□□ -1.07
TTC39C-203ENST00000540918 RABL2BQ9UNT1 228 aa8.36□□□□□ -1.07
TTC39C-203ENST00000540918 KCNAB3O43448 404 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 EFNA2O43921 213 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 ADAP1O75689 374 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 KRASP01116 189 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 IFNA10P01566 189 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 OPN1MWP04001 364 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 OPN1MW2P0DN77 364 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 OPN1MW3P0DN78 364 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 THBS4P35443 961 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 ZNF133P52736 654 aaPredicted RBP8.35□□□□□ -1.07
TTC39C-203ENST00000540918 ZNF169Q14929 603 aaPredicted RBP8.35□□□□□ -1.07
TTC39C-203ENST00000540918 FAM122BQ7Z309 247 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 DPPA2Q7Z7J5 298 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 ERRFI1Q9UJM3 462 aaPredicted RBP8.35□□□□□ -1.07
TTC39C-203ENST00000540918 OSGIN2Q9Y236 505 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 IGHV3OR15-7A0A075B7D8 119 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 PRR32B1ATL7 298 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 SPINT2O43291 252 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 KLF4O43474 513 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 TPPPO94811 219 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 TSPAN15O95858 294 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 IAPPP10997 89 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 HIST1H1DP16402 221 aaKnown RBP8.35□□□□□ -1.07
TTC39C-203ENST00000540918 ADRA2CP18825 462 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 FUT3P21217 361 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 MMP16P51512 607 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 ZFP36L1Q07352 338 aaKnown RBP8.35□□□□□ -1.07
TTC39C-203ENST00000540918 SPINK9Q5DT21 86 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 OR2A2Q6IF42 318 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 MRGPRDQ8TDS7 321 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 TECTBQ96PL2 329 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 TIMP4Q99727 224 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 C1orf123Q9NWV4 160 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 MBD2Q9UBB5 411 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 LINC01387J3KSC0 135 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 TGM6O95932 706 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 GK2Q14410 553 aaPredicted RBP8.35□□□□□ -1.07
TTC39C-203ENST00000540918 MUC20Q8N307 709 aaPredicted RBP8.35□□□□□ -1.07
TTC39C-203ENST00000540918 OR2AK2Q8NG84 335 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 ZC3H10Q96K80 434 aaKnown RBP8.35□□□□□ -1.07
TTC39C-203ENST00000540918 GCM1Q9NP62 436 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 ITGB1BP2Q9UKP3 347 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 ZFYVE26Q68DK2 2539 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 PLXND1Q9Y4D7 1925 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 A0A0U1RQK1 487 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 DLL1O00548 723 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 SNAPC5O75971 98 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 M6PRP20645 277 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 FOXG1P55316 489 aaPredicted RBP8.35□□□□□ -1.07
TTC39C-203ENST00000540918 MRPS34P82930 218 aaKnown RBP8.35□□□□□ -1.07
TTC39C-203ENST00000540918 AKR1C8PQ5T2L2 129 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 ADAM5Q6NVV9 412 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 C17orf82Q86X59 251 aaPredicted RBP8.35□□□□□ -1.07
TTC39C-203ENST00000540918 TERB2Q8NHR7 220 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 LRRC29Q8WV35 223 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 PPP1R1CQ8WVI7 109 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 MTFP1Q9UDX5 166 aa8.35□□□□□ -1.07
TTC39C-203ENST00000540918 OR5H14A6NHG9 310 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 CDX4O14627 284 aaPredicted RBP8.34□□□□□ -1.07
TTC39C-203ENST00000540918 LRP3O75074 770 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 IFNA2P01563 188 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 CALCRP30988 508 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 LSM6P62312 80 aaKnown RBP8.34□□□□□ -1.07
TTC39C-203ENST00000540918 PPP1R1AQ13522 171 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 FAM58AQ8N1B3 248 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 FBLIM1Q8WUP2 373 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 SEH1LQ96EE3 360 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 SPIN2AQ99865 258 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 SPIN2BQ9BPZ2 258 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 HEYLQ9NQ87 328 aaPredicted RBP8.34□□□□□ -1.07
TTC39C-203ENST00000540918 VPS13AQ96RL7 3174 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 ANKRD33BA6NCL7 494 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 PRR19A6NJB7 356 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 LRRC30A6NM36 301 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 H3BUI4 141 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 MED6O75586 246 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 BCL3P20749 454 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 MPGP29372 298 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 SPANXN5Q5MJ07 72 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 HACD4Q5VWC8 232 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 TMED6Q8WW62 240 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 ABHD17AQ96GS6 310 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 SF3B5Q9BWJ5 86 aaKnown RBP8.34□□□□□ -1.07
TTC39C-203ENST00000540918 EGLN1Q9GZT9 426 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 TAAR3PQ9P1P4 343 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 SF3B6Q9Y3B4 125 aaKnown RBP8.34□□□□□ -1.07
TTC39C-203ENST00000540918 CCL21O00585 134 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 CST7O76096 145 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 SNCAP37840 140 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 CEBPDP49716 269 aaPredicted RBP8.34□□□□□ -1.07
TTC39C-203ENST00000540918 ZNF674Q2M3X9 581 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 PHYHD1Q5SRE7 291 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 ZBTB44Q8NCP5 570 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 FAM117AQ9C073 453 aa8.34□□□□□ -1.07
TTC39C-203ENST00000540918 ZNF355PQ9NSJ1 428 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms