RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 IGHV3OR16-10A0A075B7F0 116 aa13.95□□□□□ -0.18
CD9-209ENST00000540891 TRAV40A0A0B4J280 105 aa13.95□□□□□ -0.18
CD9-209ENST00000540891 TRBV2A0A0J9YWF9 115 aa13.95□□□□□ -0.18
CD9-209ENST00000540891 RFPL4AA6NLU0 287 aa13.95□□□□□ -0.18
CD9-209ENST00000540891 RNF212BA8MTL3 300 aa13.95□□□□□ -0.18
CD9-209ENST00000540891 ZNF879B4DU55 563 aa13.95□□□□□ -0.18
CD9-209ENST00000540891 RFPL4AL1F8VTS6 287 aa13.95□□□□□ -0.18
CD9-209ENST00000540891 H0YJX3 145 aa13.95□□□□□ -0.18
CD9-209ENST00000540891 PLATP00750 562 aa13.95□□□□□ -0.18
CD9-209ENST00000540891 LIPFP07098 398 aa13.95□□□□□ -0.18
CD9-209ENST00000540891 SFTPBP07988 381 aa13.95□□□□□ -0.18
CD9-209ENST00000540891 AZGP1P25311 298 aaKnown RBP13.95□□□□□ -0.18
CD9-209ENST00000540891 GABRA2P47869 451 aa13.95□□□□□ -0.18
CD9-209ENST00000540891 ST3GAL4Q11206 333 aa13.95□□□□□ -0.18
CD9-209ENST00000540891 SCGB2A2Q13296 93 aa13.95□□□□□ -0.18
CD9-209ENST00000540891 DOC2BQ14184 412 aa13.95□□□□□ -0.18
CD9-209ENST00000540891 CDK5R1Q15078 307 aa13.95□□□□□ -0.18
CD9-209ENST00000540891 CRIP3Q6Q6R5 217 aa13.95□□□□□ -0.18
CD9-209ENST00000540891 TMPRSS11AQ6ZMR5 421 aa13.95□□□□□ -0.18
CD9-209ENST00000540891 RNF144BQ7Z419 303 aa13.95□□□□□ -0.18
CD9-209ENST00000540891 PHC2Q8IXK0 858 aa13.95□□□□□ -0.18
CD9-209ENST00000540891 BCL6BQ8N143 479 aaPredicted RBP13.95□□□□□ -0.18
CD9-209ENST00000540891 PNLDC1Q8NA58 520 aaKnown RBP13.95□□□□□ -0.18
CD9-209ENST00000540891 ZNRF1Q8ND25 227 aa13.95□□□□□ -0.18
CD9-209ENST00000540891 MED30Q96HR3 178 aa13.95□□□□□ -0.18
CD9-209ENST00000540891 TBX15Q96SF7 602 aa13.95□□□□□ -0.18
CD9-209ENST00000540891 DCTN5Q9BTE1 182 aa13.95□□□□□ -0.18
CD9-209ENST00000540891 SIRPDQ9H106 197 aa13.95□□□□□ -0.18
CD9-209ENST00000540891 FKBP14Q9NWM8 211 aa13.95□□□□□ -0.18
CD9-209ENST00000540891 CNOT2Q9NZN8 540 aaKnown RBP13.95□□□□□ -0.18
CD9-209ENST00000540891 SOX21Q9Y651 276 aaPredicted RBP13.95□□□□□ -0.18
CD9-209ENST00000540891 A0A0A6YYJ9 748 aa13.94□□□□□ -0.18
CD9-209ENST00000540891 EFCAB10A6NFE3 127 aa13.94□□□□□ -0.18
CD9-209ENST00000540891 GPR37O15354 613 aa13.94□□□□□ -0.18
CD9-209ENST00000540891 MYL12AP19105 171 aa13.94□□□□□ -0.18
CD9-209ENST00000540891 CEBPDP49716 269 aaPredicted RBP13.94□□□□□ -0.18
CD9-209ENST00000540891 SMIM21Q3B7S5 101 aa13.94□□□□□ -0.18
CD9-209ENST00000540891 CCDC58Q4VC31 144 aa13.94□□□□□ -0.18
CD9-209ENST00000540891 LRRC10Q5BKY1 277 aa13.94□□□□□ -0.18
CD9-209ENST00000540891 ASPHD2Q6ICH7 369 aa13.94□□□□□ -0.18
CD9-209ENST00000540891 RPL22L1Q6P5R6 122 aaKnown RBP13.94□□□□□ -0.18
CD9-209ENST00000540891 SLC25A26Q70HW3 274 aa13.94□□□□□ -0.18
CD9-209ENST00000540891 BPIFB6Q8NFQ5 453 aa13.94□□□□□ -0.18
CD9-209ENST00000540891 OR13C9Q8NGT0 318 aa13.94□□□□□ -0.18
CD9-209ENST00000540891 OR52N1Q8NH53 320 aa13.94□□□□□ -0.18
CD9-209ENST00000540891 C8orf46Q8TAG6 207 aa13.94□□□□□ -0.18
CD9-209ENST00000540891 GATAD2BQ8WXI9 593 aa13.94□□□□□ -0.18
CD9-209ENST00000540891 TMEM158Q8WZ71 300 aa13.94□□□□□ -0.18
CD9-209ENST00000540891 SLAMF9Q96A28 289 aa13.94□□□□□ -0.18
CD9-209ENST00000540891 COMMD4Q9H0A8 199 aa13.94□□□□□ -0.18
CD9-209ENST00000540891 ELL3Q9HB65 397 aaPredicted RBP13.94□□□□□ -0.18
CD9-209ENST00000540891 BABAM2Q9NXR7 383 aa13.94□□□□□ -0.18
CD9-209ENST00000540891 SLC25A10Q9UBX3 287 aaPredicted RBP13.94□□□□□ -0.18
CD9-209ENST00000540891 OGG1O15527 345 aa13.93□□□□□ -0.18
CD9-209ENST00000540891 NXPH2O95156 264 aa13.93□□□□□ -0.18
CD9-209ENST00000540891 MT-ND2P03891 347 aa13.93□□□□□ -0.18
CD9-209ENST00000540891 PRKACBP22694 351 aa13.93□□□□□ -0.18
CD9-209ENST00000540891 C21orf33P30042 268 aaPredicted RBP13.93□□□□□ -0.18
CD9-209ENST00000540891 PRDX2P32119 198 aa13.93□□□□□ -0.18
CD9-209ENST00000540891 RBP2P50120 134 aa13.93□□□□□ -0.18
CD9-209ENST00000540891 ATP1B3P54709 279 aa13.93□□□□□ -0.18
CD9-209ENST00000540891 CAV3P56539 151 aa13.93□□□□□ -0.18
CD9-209ENST00000540891 HILS1P60008 231 aa13.93□□□□□ -0.18
CD9-209ENST00000540891 ARF6P62330 175 aa13.93□□□□□ -0.18
CD9-209ENST00000540891 USP43Q70EL4 1123 aa13.93□□□□□ -0.18
CD9-209ENST00000540891 AHSA2Q719I0 299 aa13.93□□□□□ -0.18
CD9-209ENST00000540891 BPIFB2Q8N4F0 458 aa13.93□□□□□ -0.18
CD9-209ENST00000540891 PARP16Q8N5Y8 322 aa13.93□□□□□ -0.18
CD9-209ENST00000540891 ZNF418Q8TF45 676 aaPredicted RBP13.93□□□□□ -0.18
CD9-209ENST00000540891 SPSB1Q96BD6 273 aa13.93□□□□□ -0.18
CD9-209ENST00000540891 CEP19Q96LK0 163 aa13.93□□□□□ -0.18
CD9-209ENST00000540891 ZNF48Q96MX3 618 aaPredicted RBP13.93□□□□□ -0.18
CD9-209ENST00000540891 WDFY2Q96P53 400 aa13.93□□□□□ -0.18
CD9-209ENST00000540891 OPALINQ96PE5 141 aa13.93□□□□□ -0.18
CD9-209ENST00000540891 PCGF1Q9BSM1 259 aa13.93□□□□□ -0.18
CD9-209ENST00000540891 ZCCHC4Q9H5U6 513 aa13.93□□□□□ -0.18
CD9-209ENST00000540891 CNTD2Q9H8S5 307 aa13.93□□□□□ -0.18
CD9-209ENST00000540891 TOX4O94842 621 aa13.92□□□□□ -0.18
CD9-209ENST00000540891 INMTO95050 263 aa13.92□□□□□ -0.18
CD9-209ENST00000540891 KNG1P01042 644 aa13.92□□□□□ -0.18
CD9-209ENST00000540891 RPSAP08865 295 aaKnown RBP13.92□□□□□ -0.18
CD9-209ENST00000540891 MTCP1P56278 107 aa13.92□□□□□ -0.18
CD9-209ENST00000540891 LHFPL2Q6ZUX7 228 aa13.92□□□□□ -0.18
CD9-209ENST00000540891 C9orf139Q6ZV77 190 aa13.92□□□□□ -0.18
CD9-209ENST00000540891 TMEM185AQ8NFB2 350 aa13.92□□□□□ -0.18
CD9-209ENST00000540891 H1FXQ92522 213 aaKnown RBP13.92□□□□□ -0.18
CD9-209ENST00000540891 RFT1Q96AA3 541 aa13.92□□□□□ -0.18
CD9-209ENST00000540891 SMIM19Q96E16 107 aa13.92□□□□□ -0.18
CD9-209ENST00000540891 SPACA5Q96QH8 159 aa13.92□□□□□ -0.18
CD9-209ENST00000540891 ESM1Q9NQ30 184 aa13.92□□□□□ -0.18
CD9-209ENST00000540891 DHDHQ9UQ10 334 aa13.92□□□□□ -0.18
CD9-209ENST00000540891 IGKV1-12A0A0C4DH73 117 aa13.91□□□□□ -0.18
CD9-209ENST00000540891 SPRY1O43609 319 aaPredicted RBP13.91□□□□□ -0.18
CD9-209ENST00000540891 ALX3O95076 343 aa13.91□□□□□ -0.18
CD9-209ENST00000540891 IGKV1D-12P01611 117 aa13.91□□□□□ -0.18
CD9-209ENST00000540891 NDUFB7P17568 137 aa13.91□□□□□ -0.18
CD9-209ENST00000540891 FPR2P25090 351 aa13.91□□□□□ -0.18
CD9-209ENST00000540891 NPBWR2P48146 333 aa13.91□□□□□ -0.18
CD9-209ENST00000540891 SOX2P48431 317 aa13.91□□□□□ -0.18
CD9-209ENST00000540891 POU3F4P49335 361 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms