RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 PPIAL4GP0DN37 164 aa15.12■□□□□ 0.01
SNRPA1-203ENST00000540017 MYL12AP19105 171 aa15.12■□□□□ 0.01
SNRPA1-203ENST00000540017 AZGP1P25311 298 aaKnown RBP15.12■□□□□ 0.01
SNRPA1-203ENST00000540017 C21orf33P30042 268 aaPredicted RBP15.12■□□□□ 0.01
SNRPA1-203ENST00000540017 CEBPDP49716 269 aaPredicted RBP15.12■□□□□ 0.01
SNRPA1-203ENST00000540017 IL13RA1P78552 427 aa15.12■□□□□ 0.01
SNRPA1-203ENST00000540017 CDK5R1Q15078 307 aa15.12■□□□□ 0.01
SNRPA1-203ENST00000540017 CNN3Q15417 329 aaKnown RBP15.12■□□□□ 0.01
SNRPA1-203ENST00000540017 KRTAP24-1Q3LI83 254 aa15.12■□□□□ 0.01
SNRPA1-203ENST00000540017 RPL22L1Q6P5R6 122 aaKnown RBP15.12■□□□□ 0.01
SNRPA1-203ENST00000540017 CRIP3Q6Q6R5 217 aa15.12■□□□□ 0.01
SNRPA1-203ENST00000540017 AHSA2Q719I0 299 aa15.12■□□□□ 0.01
SNRPA1-203ENST00000540017 BCL6BQ8N143 479 aaPredicted RBP15.12■□□□□ 0.01
SNRPA1-203ENST00000540017 ZNRF1Q8ND25 227 aa15.12■□□□□ 0.01
SNRPA1-203ENST00000540017 LY6G5BQ8NDX9 201 aa15.12■□□□□ 0.01
SNRPA1-203ENST00000540017 DNAAF1Q8NEP3 725 aa15.12■□□□□ 0.01
SNRPA1-203ENST00000540017 OR13C9Q8NGT0 318 aa15.12■□□□□ 0.01
SNRPA1-203ENST00000540017 SLAMF9Q96A28 289 aa15.12■□□□□ 0.01
SNRPA1-203ENST00000540017 MED30Q96HR3 178 aa15.12■□□□□ 0.01
SNRPA1-203ENST00000540017 SLC6A7Q99884 636 aa15.12■□□□□ 0.01
SNRPA1-203ENST00000540017 COMMD4Q9H0A8 199 aa15.12■□□□□ 0.01
SNRPA1-203ENST00000540017 FKBP14Q9NWM8 211 aa15.12■□□□□ 0.01
SNRPA1-203ENST00000540017 BABAM2Q9NXR7 383 aa15.12■□□□□ 0.01
SNRPA1-203ENST00000540017 ZNF69Q9UC07 566 aa15.12■□□□□ 0.01
SNRPA1-203ENST00000540017 NUP50Q9UKX7 468 aa15.12■□□□□ 0.01
SNRPA1-203ENST00000540017 SOX21Q9Y651 276 aaPredicted RBP15.12■□□□□ 0.01
SNRPA1-203ENST00000540017 H0YHG0 523 aa15.11■□□□□ 0.01
SNRPA1-203ENST00000540017 OGG1O15527 345 aa15.11■□□□□ 0.01
SNRPA1-203ENST00000540017 TCF21O43680 179 aa15.11■□□□□ 0.01
SNRPA1-203ENST00000540017 VENTXO95231 258 aa15.11■□□□□ 0.01
SNRPA1-203ENST00000540017 ECDO95905 644 aaPredicted RBP15.11■□□□□ 0.01
SNRPA1-203ENST00000540017 SFTPBP07988 381 aa15.11■□□□□ 0.01
SNRPA1-203ENST00000540017 MMP9P14780 707 aa15.11■□□□□ 0.01
SNRPA1-203ENST00000540017 RBP2P50120 134 aa15.11■□□□□ 0.01
SNRPA1-203ENST00000540017 TUSC1Q2TAM9 212 aa15.11■□□□□ 0.01
SNRPA1-203ENST00000540017 SMIM21Q3B7S5 101 aa15.11■□□□□ 0.01
SNRPA1-203ENST00000540017 CCDC58Q4VC31 144 aa15.11■□□□□ 0.01
SNRPA1-203ENST00000540017 LRRC10Q5BKY1 277 aa15.11■□□□□ 0.01
SNRPA1-203ENST00000540017 SLC25A26Q70HW3 274 aa15.11■□□□□ 0.01
SNRPA1-203ENST00000540017 OR52N1Q8NH53 320 aa15.11■□□□□ 0.01
SNRPA1-203ENST00000540017 HAVCR2Q8TDQ0 301 aa15.11■□□□□ 0.01
SNRPA1-203ENST00000540017 SDSLQ96GA7 329 aa15.11■□□□□ 0.01
SNRPA1-203ENST00000540017 SPACA5Q96QH8 159 aa15.11■□□□□ 0.01
SNRPA1-203ENST00000540017 SIRPDQ9H106 197 aa15.11■□□□□ 0.01
SNRPA1-203ENST00000540017 ELL3Q9HB65 397 aaPredicted RBP15.11■□□□□ 0.01
SNRPA1-203ENST00000540017 SLC25A10Q9UBX3 287 aaPredicted RBP15.11■□□□□ 0.01
SNRPA1-203ENST00000540017 TRAV40A0A0B4J280 105 aa15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 RNF212BA8MTL3 300 aa15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 ZNF879B4DU55 563 aa15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 LIPFP07098 398 aa15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 PRKACBP22694 351 aa15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 PRDX2P32119 198 aa15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 ATP1B3P54709 279 aa15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 MTCP1P56278 107 aa15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 ARF6P62330 175 aa15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 C11orf91Q3C1V1 193 aa15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 C6orf141Q5SZD1 244 aa15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 ASPHD2Q6ICH7 369 aa15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 PARP16Q8N5Y8 322 aa15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 ZFP41Q8N8Y5 198 aa15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 PNLDC1Q8NA58 520 aaKnown RBP15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 TSEN15Q8WW01 171 aaKnown RBP15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 SGCDQ92629 289 aa15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 RFT1Q96AA3 541 aa15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 CEP19Q96LK0 163 aa15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 WDFY2Q96P53 400 aa15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 OPALINQ96PE5 141 aa15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 TBX15Q96SF7 602 aa15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 PCGF1Q9BSM1 259 aa15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 DCTN5Q9BTE1 182 aa15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 ZCCHC4Q9H5U6 513 aa15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 CHCHD3Q9NX63 227 aaKnown RBP15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 DHDHQ9UQ10 334 aa15.1■□□□□ 0.01
SNRPA1-203ENST00000540017 SPRY1O43609 319 aaPredicted RBP15.09■□□□□ 0.01
SNRPA1-203ENST00000540017 ATP6V1G2O95670 118 aa15.09■□□□□ 0.01
SNRPA1-203ENST00000540017 MT-ND2P03891 347 aa15.09■□□□□ 0.01
SNRPA1-203ENST00000540017 NPBWR2P48146 333 aa15.09■□□□□ 0.01
SNRPA1-203ENST00000540017 SOX2P48431 317 aa15.09■□□□□ 0.01
SNRPA1-203ENST00000540017 POU3F4P49335 361 aa15.09■□□□□ 0.01
SNRPA1-203ENST00000540017 CAV3P56539 151 aa15.09■□□□□ 0.01
SNRPA1-203ENST00000540017 SCGB2A2Q13296 93 aa15.09■□□□□ 0.01
SNRPA1-203ENST00000540017 DMKNQ6E0U4 476 aaPredicted RBP15.09■□□□□ 0.01
SNRPA1-203ENST00000540017 LHFPL2Q6ZUX7 228 aa15.09■□□□□ 0.01
SNRPA1-203ENST00000540017 STX19Q8N4C7 294 aa15.09■□□□□ 0.01
SNRPA1-203ENST00000540017 OR13C5Q8NGS8 318 aa15.09■□□□□ 0.01
SNRPA1-203ENST00000540017 C8orf46Q8TAG6 207 aa15.09■□□□□ 0.01
SNRPA1-203ENST00000540017 H1FXQ92522 213 aaKnown RBP15.09■□□□□ 0.01
SNRPA1-203ENST00000540017 SPSB1Q96BD6 273 aa15.09■□□□□ 0.01
SNRPA1-203ENST00000540017 CNTD2Q9H8S5 307 aa15.09■□□□□ 0.01
SNRPA1-203ENST00000540017 IL36RNQ9UBH0 155 aa15.09■□□□□ 0.01
SNRPA1-203ENST00000540017 COL6A5A8TX70 2615 aa15.08■□□□□ 0
SNRPA1-203ENST00000540017 IGKV1-12A0A0C4DH73 117 aa15.08■□□□□ 0
SNRPA1-203ENST00000540017 SLC1A7O00341 560 aa15.08■□□□□ 0
SNRPA1-203ENST00000540017 GPR37O15354 613 aa15.08■□□□□ 0
SNRPA1-203ENST00000540017 TOX4O94842 621 aa15.08■□□□□ 0
SNRPA1-203ENST00000540017 IGKV1D-12P01611 117 aa15.08■□□□□ 0
SNRPA1-203ENST00000540017 NDUFB7P17568 137 aa15.08■□□□□ 0
SNRPA1-203ENST00000540017 MYF6P23409 242 aa15.08■□□□□ 0
SNRPA1-203ENST00000540017 PDZK1IP1Q13113 114 aa15.08■□□□□ 0
SNRPA1-203ENST00000540017 MED21Q13503 144 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms